Contig 006030:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF020A11+            CCAGGGACATCAATTGTAACACTAAGTATTTGTTCACCAAAGTCAACTGAAACATTCTT
                      ____________________________________________________________
consensus              CCAGGGACATCAATTGTAACACTAAGTATTTGTTCACCAAAGTCAACTGAAACATTCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF020A11+           TGCAGGAATTCCCTTGGCAAATATAGTAACAACCACTTCCTCAGGCTTCTGATAGAAGCC
                      ____________________________________________________________
consensus             TGCAGGAATTCCCTTGGCAAATATAGTAACAACCACTTCCTCAGGCTTCTGATAGAAGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF020A11+           ATGCCTGTATTTTGGCTTGACAGCTGCTTGAGCATCTTTAGGTATAGCTGCTGCCGCAGC
                      ____________________________________________________________
consensus             ATGCCTGTATTTTGGCTTGACAGCTGCTTGAGCATCTTTAGGTATAGCTGCTGCCGCAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF020A11+           ACCCAATCCTTCCGATTCAGGAGGAATAGCAATGTTCATTGTGGAGGACTCCACATTAGC
JMFF035N12+                                                             CCACATTAGC
                      ____________________________________________________________
consensus             ACCCAATCCTTCCGATTCAGGAGGAATAGCAATGTTCATTGTGGAGGACTCCACATTAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF020A11+           TTGTTCACCAGCTTCCTCTTTGATGCATTCATCACATTCTTTGATCAAATCACTGAATTT
JMFF035N12+           TTGTTCACCAGCTTCCTCTTTGATGCATTCATCACATTCTTTGATCAAATCACTGAATTT
                      ____________________________________________________________
consensus             TTGTTCACCAGCTTCCTCTTTGATGCATTCATCACATTCTTTGATCAAATCACTGAATTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF020A11+           CGATTTCAAACTTTCTGGTGCTAAAGGAAGACCTGTCTCAAGAGCTGCCTTTGCAGTCTG
JMFF035N12+           CGATTTCAAACTTTCTGGTGCTAAAGGAAGACCTGTCTCAAGAGCTGCCTTTGCAGTCTG
                      ____________________________________________________________
consensus             CGATTTCAAACTTTCTGGTGCTAAAGGAAGACCTGTCTCAAGAGCTGCCTTTGCAGTCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF020A11+           GAATTCTTCCAGTTTCAAACATGCCATGCCTTTACGCAAATATGCTCTAGCCATCGAAGG
JMFF035N12+           GAATTCTTCCAGTTTCAAACATGCCATGCCTTTACGCAAATATGCTCTAGCCATCGAAGG
                      ____________________________________________________________
consensus             GAATTCTTCCAGTTTCAAACATGCCATGCCTTTACGCAAATATGCTCTAGCCATCGAAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF020A11+           ATCCAATTCAATTGCCTTGTTTGCATCATCAACAGCTTCGGTGAAGTTTTGGAGTTTGAT
JMFF035N12+           ATCCAATTCAATTGCCTTGTTTGCATCATCAACAGCTTCGGTGAAGTTTTGGAGTTTGAT
                      ____________________________________________________________
consensus             ATCCAATTCAATTGCCTTGTTTGCATCATCAACAGCTTCGGTGAAGTTTTGGAGTTTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF020A11+           GTTGGCCTGAGCACGGTCGGAGAAGAGCTCGGCGTTATTAGGGCTCATACCAATTGCCTG
JMFF035N12+           GTTGGCCTGAGCACGGTCGGAGAAGAGCTCGGCGTTATTAGGGCTCATACCAATTGCCTG
                      ____________________________________________________________
consensus             GTTGGCCTGAGCACGGTCGGAGAAGAGCTCGGCGTTATTAGGGCTCATACCAATTGCCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF020A11+           AGTGTAGAGGTCAACAGCAAGCTCGAAATGGTCGTCAATGAAGGCTTGCTTAGCCTTATG
JMFF035N12+           AGTGTAGAGGTCAACAGCAAGCTCGAAATGGTCGTCAATGAAGGCTTGCTTAGCCTTATG
                      ____________________________________________________________
consensus             AGTGTAGAGGTCAACAGCAAGCTCGAAATGGTCGTCAATGAAGGCTTGCTTAGCCTTATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF020A11+           CTCCAGATCGGACGCCATG                                         
JMFF035N12+           CTCCAGATCGGACGCCATGAACCTTCGTTACGTTGCCGGCGACTAACTGCGAAACTTCGG
                      ____________________________________________________________
consensus             CTCCAGATCGGACGCCATGAACCTTCGTTACGTTGCCGGCGACTAACTGCGAAACTTCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF035N12+           ATGAGAAGAGCTCAGGCTTGAGAATGGAACGATGTCGAGAATGTGAAACTGGAGAGACAC
                      ____________________________________________________________
consensus             ATGAGAAGAGCTCAGGCTTGAGAATGGAACGATGTCGAGAATGTGAAACTGGAGAGACAC