| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF023I12 | Sequence | 458 | 006027 (4) | ref|XP_009589862.1| | 1e-07 | PREDICTED: protein IQ-DOMAIN 31-like [Nicotiana tomentosiformis] ref|XP_00958986 | 719 | 013813 (5) | ref|XP_011085765.1| | 1e-60 | PREDICTED: LOW QUALITY PROTEIN: protein IQ-DOMAIN 31-like [Sesamum indicum] |
| JMFF024K04 | Sequence | 528 | 006027 (4) | ref|XP_009589862.1| | 9e-16 | PREDICTED: protein IQ-DOMAIN 31-like [Nicotiana tomentosiformis] ref|XP_00958986 | 765 | 013813 (5) | ref|XP_011085765.1| | 2e-63 | PREDICTED: LOW QUALITY PROTEIN: protein IQ-DOMAIN 31-like [Sesamum indicum] |
| JMFF035H15 | Sequence | 552 | 006027 (4) | ref|XP_009589862.1| | 8e-20 | PREDICTED: protein IQ-DOMAIN 31-like [Nicotiana tomentosiformis] ref|XP_00958986 | 669 | 013813 (5) | ref|XP_011085765.1| | 3e-57 | PREDICTED: LOW QUALITY PROTEIN: protein IQ-DOMAIN 31-like [Sesamum indicum] |
| JMFF044C23 | Sequence | 636 | 006027 (4) | ref|XP_009589862.1| | 2e-40 | PREDICTED: protein IQ-DOMAIN 31-like [Nicotiana tomentosiformis] ref|XP_00958986 | 592 | 013813 (5) | ref|XP_009589862.1| | 4e-39 | PREDICTED: protein IQ-DOMAIN 31-like [Nicotiana tomentosiformis] ref|XP_00958986 |
This contig is upended
. : . : . : . : . : . :
JMFF044C23+ TGCCGCCTAACCAAGTGCCCGCGAATAAGTGCTTGC
____________________________________________________________
consensus TGCCGCCTAACCAAGTGCCCGCGAATAAGTGCTTGC
. : . : . : . : . : . :
JMFF044C23+ AGCCTTATGATTCCCTTAAGGGCTCGGAAAGCACGACGAGCCAAATAACCCCTAAAGACC
JMFF035H15+ TAAAGACC
____________________________________________________________
consensus AGCCTTATGATTCCCTTAAGGGCTCGGAAAGCACGACGAGCCAAATAACCCCTAAAGACC
. : . : . : . : . : . :
JMFF044C23+ GCTTGTGCTTTTGTTGCAGCTTTTTCTTGCCTTTGCAGTTCAGCATCATCAACTGACACA
JMFF024K04+ GTTGCAGCTTTTTCTTGCCTTTGCAGTTCAGCATCATCAACTGACACA
JMFF035H15+ GCTTGTGCTTTTGTTGCAGCTTTTTCTTGCCTTTGCAGTTCAGCATCATCAACTGACACA
____________________________________________________________
consensus GCTTGTGCTTTTGTTGCAGCTTTTTCTTGCCTTTGCAGTTCAGCATCATCAACTGACACA
. : . : . : . : . : . :
JMFF044C23+ GTGCCTAAGGTTAATTGTGAATCCACACCCTGTGCCACAGAGGACAAAACAACAGAATCA
JMFF024K04+ GTGCCTAAGGTTAATTGTGAATCCACACCCTGTGCCACAGAGGACAAAACAACAGAATCA
JMFF023I12+ TGTGAATCCACACCCTGTGCCACAGAGGACAAAACAACAGAATCA
JMFF035H15+ GTGCCTAAGGTTAATTGTGAATCCACACCCTGTGCCACAGAGGACAAAACAACAGAATCA
____________________________________________________________
consensus GTGCCTAAGGTTAATTGTGAATCCACACCCTGTGCCACAGAGGACAAAACAACAGAATCA
. : . : . : . : . : . :
JMFF044C23+ CCTGGTAACCCAGTGGTTGTGCCCTTATCCAGTTCTGCCTTCTCTTCACCTCTATTAATA
JMFF024K04+ CCTGGTAACCCAGTGGTTGTGCCCTTATCCAGTTCTGCCTTCTCTTCACCTCTATTAATA
JMFF023I12+ CCTGGTAACCCAGTGGTTGTGCCCTTATCCAGTTCTGCCTTCTCTTCACCTCTATTAATA
JMFF035H15+ CCTGGTAACCCAGTGGTTGTGCCCTTATCCAGTTCTGCCTTCTCTTCACCTCTATTAATA
____________________________________________________________
consensus CCTGGTAACCCAGTGGTTGTGCCCTTATCCAGTTCTGCCTTCTCTTCACCTCTATTAATA
. : . : . : . : . : . :
JMFF044C23+ TTGTGACTTGATGAATCTGGGATCAATGGAGGATCCTCCCCAAGATCTGACACAGGTACT
JMFF024K04+ TTGTGACTTGATGAATCTGGGATCAATGGAGGATCCTCCCCAAGATCTGACACAGGTACT
JMFF023I12+ TTGTGACTTGATGAATCTGGGATCAATGGAGGATCCTCCCCAAGATCTGACACAGGTACT
JMFF035H15+ TTGTGACTTGATGAATCTGGGATCAATGGAGGATCCTCCCCAAGATCTGACACAGGTACT
____________________________________________________________
consensus TTGTGACTTGATGAATCTGGGATCAATGGAGGATCCTCCCCAAGATCTGACACAGGTACT
. : . : . : . : . : . :
JMFF044C23+ TTCTTGGTGGTGCTTTTGTCAGTAGCGGCATCCTTTGATAAGCTTGACTTGGAAGATTTC
JMFF024K04+ TTCTTGGTGGTGCTTTTGTCAGTAGCGGCATCCTTTGATAAGCTTGACTTGGAAGATTTC
JMFF023I12+ TTCTTGGTGGTGCTTTTGTCAGTAGCGGCATCCTTTGATAAGCTTGACTTGGAAGATTTC
JMFF035H15+ TTCTTGGTGGTGCTTTTGTCAGTAGCGGCATCCTTTGATAAGCTTGACTTGGAAGATTTC
____________________________________________________________
consensus TTCTTGGTGGTGCTTTTGTCAGTAGCGGCATCCTTTGATAAGCTTGACTTGGAAGATTTC
. : . : . : . : . : . :
JMFF044C23+ TTCCCAAAAAGCACAGTCTTGATCCACTTTCCTGGAGATTTCCCCATTGCTGACAGCCTG
JMFF024K04+ TTCCCAAAAAGCACAGTCTTGATCCACTTTCCTGGAGATTTCCCCATTGCTGACAGCCTG
JMFF023I12+ TTCCCAAAAAGCACAGTCTTGATCCACTTTCCTGGAGATTTCCCCATTGCTGACAGCCTG
JMFF035H15+ TTCCCAAAAAGCACAGTCTTGATCCACTTTCCTGGAGATTTCCCCATTGCTGACAGCCTG
____________________________________________________________
consensus TTCCCAAAAAGCACAGTCTTGATCCACTTTCCTGGAGATTTCCCCATTGCTGACAGCCTG
. : . : . : . : . : . :
JMFF044C23+ CTGCAAGGATCAGAGGGACTTCAATTTTTTCAGCCTCGAGAAATGAAGATACTCAAGATC
JMFF024K04+ CTGCAAGGATCAGAGGGACTTCAATTTTTTCAGCCTCGAGAAATGAAGATACTCAAGATC
JMFF023I12+ CTGCAAGGATCAGAGGGACTTCAATTTTTTCAGCCTCGAGAAATGAAGATACTCAAGATC
JMFF035H15+ CTGCAAGGATCAGAGGGACTTCAATTTTTTCAGCCTCGAGAAATGAAGATACTCAAGATC
____________________________________________________________
consensus CTGCAAGGATCAGAGGGACTTCAATTTTTTCAGCCTCGAGAAATGAAGATACTCAAGATC
. : . : . : . : . : . :
JMFF044C23+ CGGGAACCACCATAGGTGAAACCCAAACGGACCCTTCTCCACCGCTCGTCTCCGCCTCTT
JMFF024K04+ CGGGAACCACCATAGGTGAAACCCAAACGGACCCTTCTCCACCGCTCGTCTCCGCCTCTT
JMFF023I12+ CGGGAACCACCATAGGTGAAACCCAAACGGACCCTTCTCCACCGCTCGTCTCCGCCTCTT
JMFF035H15+ CGGGAACCACCATAGGTGAAACCCAAACGGACCCTTCTCCACCGCTCGTCTCCGCCTCTT
____________________________________________________________
consensus CGGGAACCACCATAGGTGAAACCCAAACGGACCCTTCTCCACCGCTCGTCTCCGCCTCTT
. : . : . : . : . : . :
JMFF044C23+ CTCTTCGCTGTGTACCCGCAGACTGTAGAGAGAGTAGAAACCCAACACTCTAT
JMFF024K04+ CTCTTCGCTGTGTACCCGCAGACTGTAGAGAGAGTAGAAACCCAACACTCTAT
JMFF023I12+ CTCTTCGCTGTGTACCCGCAGACTGTAGAGAGAGTAGAAACCCAACACCCTAT
JMFF035H15+ CTCTTCGCTGTGTACCCGCAGACTGTAGAGAGAGTAGAAACCCAACACTCTATAGTCTAT
____________________________________________________________
consensus CTCTTCGCTGTGTACCCGCAGACTGTAGAGAGAGTAGAAACCCAACACTCTATAGTCTAT