Contig 006022:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF034G13-                                              TTACTTTATTATAAAAACAACAAA
                      ____________________________________________________________
consensus                                                 TTACTTTATTATAAAAACAACAAA
 
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rJMFF021J02-                   ATGTTAGGTAGGCTATGAATCATTGTTGCATCCTCCTATACTTCTGCTCTC
rJMFF034G13-          AATCTGTACATGTTAGGTAGGCTATGAATCATTGTTGCATCCTCCTATACTTCTGCTCTC
                      ____________________________________________________________
consensus             AATCTGTACATGTTAGGTAGGCTATGAATCATTGTTGCATCCTCCTATACTTCTGCTCTC
 
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rJMFF021J02-          ACATATACTATAAAAAAAAAAATTCTCANACCAATCAGGATGAGGTTCTCCTTTGGATAA
rJMFF034G13-          ACATATACTATAAAAAAAAAAATTCTCANACCAATCAGGATGAGGTTCTCCTTTGGATAA
                      ____________________________________________________________
consensus             ACATATACTATAAAAAAAAAAATTCTCANACCAATCAGGATGAGGTTCTCCTTTGGATAA
 
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rJMFF021J02-          ACCTAAAACCTGGCTGTGANANAACTGGCTGGCCAGAGAAAAGAGTACAAACAAAAAAAT
rJMFF034G13-          ACCTAAAACCTGGCTGTGANANAACTGGCTGGCCAGAGAAAAGAGTACAAACAAAAAAAT
                      ____________________________________________________________
consensus             ACCTAAAACCTGGCTGTGANANAACTGGCTGGCCAGAGAAAAGAGTACAAACAAAAAAAT
 
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rJMFF021J02-          GGATATGTTATGTATGTACTATTGTTCTTCAATTACTTCACTCTTTCTTCTTGGATCTTC
rJMFF034G13-          GGATATGTTATGTATGTACTATTGTTCTTCAATTACTTCACTCTTTCTTCTTGGATCTTC
                      ____________________________________________________________
consensus             GGATATGTTATGTATGTACTATTGTTCTTCAATTACTTCACTCTTTCTTCTTGGATCTTC
 
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rJMFF021J02-          TTTGGGTACCTANAAAATCCCTTTTTGCATGCTGTTACAGCTTCNATATCGATCTTGTAA
rJMFF034G13-          TTTGGGTACCTANAAAATCCCTTTTTGCATGCTGTTACAGCTTCGATATCGATCTTGTAA
                      ____________________________________________________________
consensus             TTTGGGTACCTANAAAATCCCTTTTTGCATGCTGTTACAGCTTCGATATCGATCTTGTAA
 
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rJMFF021J02-          ACAANAAGCTTTCTTCTCTCTCTGCAACTGATCCTATACGCCACCACGATGTGCGCAATC
rJMFF034G13-          ACAANAAGCTTTCTTCTCTCTCTGCAACTGATCCTATACNCCACCACGATGTGCGCAATC
                      ____________________________________________________________
consensus             ACAANAAGCTTTCTTCTCTCTCTGCAACTGATCCTATACGCCACCACGATGTGCGCAATC
 
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rJMFF021J02-          GCCATAGCCACCGAGCACGCAAACATCGCCATCTCAGCCGCGGCGGCGGCGGCCCGGACA
rJMFF034G13-          GCCATAGCCACCGAGCACGCAAACATCGCCATCTCAGCCGCGGCGGCGGCGGCCCGGACA
                      ____________________________________________________________
consensus             GCCATAGCCACCGAGCACGCAAACATCGCCATCTCAGCCGCGGCGGCGGCGGCCCGGACA
 
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rJMFF021J02-          TGATGACCTCCATTAACGCCGTCGTATCTCGACCTCGAACTGTTCCCGAAAACGTACGAC
rJMFF034G13-          TGATGACCTCCATTAACGCCGTCGTATCTCGACCTCGAACTGTTCCCGAAAACGTACGAC
JMFF021J02+                                                      TCCCGAAAACGTACGAC
JMFF034G13+                                         GACCTCGAACTGTTCCCGAAAACGTACGAC
                      ____________________________________________________________
consensus             TGATGACCTCCATTAACGCCGTCGTATCTCGACCTCGAACTGTTCCCGAAAACGTACGAC
 
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rJMFF021J02-          GCCTTCAGCGACACGAAAACTAACGACGTTACCGAACACACGGTCGCGATTCCCAGGTAC
rJMFF034G13-          GCCTTCAGCGACACGAAAACTAACGACGTTACCGAACACACGGTCGCGATTCCCAGGTAC
JMFF021J02+           GCCTTCAGCGACACGAAAACTAACGACGTTACCGAACACACGGTCGCGATTCCCAGGTAC
JMFF034G13+           GCCTTCAGCGACACGAAAACTAACGACGTTACCGAACACACGGTCGCGATTCCCAGGTAC
                      ____________________________________________________________
consensus             GCCTTCAGCGACACGAAAACTAACGACGTTACCGAACACACGGTCGCGATTCCCAGGTAC
 
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rJMFF021J02-          GGCCCCCTCGATANACTTGGGCCGTCNCACGAACTGTACACACATAAAATGATGGCGGAG
rJMFF034G13-          GGCCCCCTCGATAGACTTGGGCCGTCGCACGAACTGTACACACATANAATGATGGCGGAG
JMFF021J02+           GGCCCCCTCGATAGACTTGGGCCGTCGCACGAACTGTACACACATAGAATGATGGCGGAG
JMFF034G13+           GGCCCCCTCGATAGACTTGGGCCGTCGCACGAACTGTACACACATAGAATGATGGCGGAG
                      ____________________________________________________________
consensus             GGCCCCCTCGATAGACTTGGGCCGTCGCACGAACTGTACACACATAGAATGATGGCGGAG
 
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rJMFF021J02-          CG                                                          
rJMFF034G13-          CGGACGATGGATAC                                              
JMFF021J02+           CGGACGATGGATACGAGGGGGATGTCGACGAGGGAGTAGCGGAAGTCGTAGGTGGTGAGA
JMFF034G13+           CGGACGATGGATACGAGGGGGATGTCGACGAGGGAGTAGCGGAAGTCGTAGGTGGTGAGA
                      ____________________________________________________________
consensus             CGGACGATGGATACGAGGGGGATGTCGACGAGGGAGTAGCGGAAGTCGTAGGTGGTGAGA
 
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JMFF021J02+           ATAGAAGACAGAGACGCCGCCGGGGACCAGGACGCCGAGAGCAGCGCCGACGGGAGAACG
JMFF034G13+           ATAGAAGACAGAGACGCCGCCGGGGACCAGGACGCCGAGAGCAGCGCCGACGGGAGAACG
                      ____________________________________________________________
consensus             ATAGAAGACAGAGACGCCGCCGGGGACCAGGACGCCGAGAGCAGCGCCGACGGGAGAACG
 
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JMFF021J02+           GCGTCGGCGATTCCGACGAGAATCGGCGCGGAGAAGACCAGGAGAGAGATTAGCATGGTG
JMFF034G13+           GCGTCGGCGATTCCGACGAGAATCGGCGCGGAGAAGACCAGGAGAGAGATTAGCATGGTG
                      ____________________________________________________________
consensus             GCGTCGGCGATTCCGACGAGAATCGGCGCGGAGAAGACCAGGAGAGAGATTAGCATGGTG
 
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JMFF021J02+           ATCAAGAAGAAGAGAGTCTTGATCCACCTCAACGCCCTGTTCCTCTTCTCCTCTTTCAAG
JMFF034G13+           ATCAAGAAGAAGAGAGTCTTGATCCACCTCAACGCCCTGTTCCTCTTCTCCTCTTTCAAG
                      ____________________________________________________________
consensus             ATCAAGAAGAAGAGAGTCTTGATCCACCTCAACGCCCTGTTCCTCTTCTCCTCTTTCAAG
 
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JMFF021J02+           AAACTCATCGTCTTCCCGGCCTGCTCTTCTTGAATTTCCGGCGAGAAATGAAAACTGATT
JMFF034G13+           AAACTCATCGTCTTCCCGGCCTGCTCTTCTTGAATTTCCGGCGAGAAATGAAAACTGATT
                      ____________________________________________________________
consensus             AAACTCATCGTCTTCCCGGCCTGCTCTTCTTGAATTTCCGGCGAGAAATGAAAACTGATT
 
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JMFF021J02+           GAATGCTTAGACCGTTGGGGGGGTTTTTGGAGGGCTACTTGGAAAGCCGGTCAAGAAGAC
JMFF034G13+           GAATGCTTAGACCGTTGGGGGGGTTTTTGGAGGGCTACTTGGAAAGCCGGTCAAGAAGAC
                      ____________________________________________________________
consensus             GAATGCTTAGACCGTTGGGGGGGTTTTTGGAGGGCTACTTGGAAAGCCGGTCAAGAAGAC