Contig 006022:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021J02Sequence497006022 (4)ref|XP_009787596.1|165PREDICTED: uncharacterized protein LOC104235482 [Nicotiana sylvestris]593006022 (4)ref|XP_004149236.1|1e-33PREDICTED: uncharacterized protein LOC101213138 isoform 1 [Cucumis sativus] ref
JMFF034G13Sequence510006022 (4)ref|XP_009787596.1|170PREDICTED: uncharacterized protein LOC104235482 [Nicotiana sylvestris]638006022 (4)ref|XP_009787596.1|161PREDICTED: uncharacterized protein LOC104235482 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF034G13- TTACTTTATTATAAAAACAACAAA
                      ____________________________________________________________
consensus TTACTTTATTATAAAAACAACAAA
 
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rJMFF021J02- ATGTTAGGTAGGCTATGAATCATTGTTGCATCCTCCTATACTTCTGCTCTC
rJMFF034G13- AATCTGTACATGTTAGGTAGGCTATGAATCATTGTTGCATCCTCCTATACTTCTGCTCTC
                      ____________________________________________________________
consensus AATCTGTACATGTTAGGTAGGCTATGAATCATTGTTGCATCCTCCTATACTTCTGCTCTC
 
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rJMFF021J02- ACATATACTATAAAAAAAAAAATTCTCANACCAATCAGGATGAGGTTCTCCTTTGGATAA
rJMFF034G13- ACATATACTATAAAAAAAAAAATTCTCANACCAATCAGGATGAGGTTCTCCTTTGGATAA
                      ____________________________________________________________
consensus ACATATACTATAAAAAAAAAAATTCTCANACCAATCAGGATGAGGTTCTCCTTTGGATAA
 
. : . : . : . : . : . :
rJMFF021J02- ACCTAAAACCTGGCTGTGANANAACTGGCTGGCCAGAGAAAAGAGTACAAACAAAAAAAT
rJMFF034G13- ACCTAAAACCTGGCTGTGANANAACTGGCTGGCCAGAGAAAAGAGTACAAACAAAAAAAT
                      ____________________________________________________________
consensus ACCTAAAACCTGGCTGTGANANAACTGGCTGGCCAGAGAAAAGAGTACAAACAAAAAAAT
 
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rJMFF021J02- GGATATGTTATGTATGTACTATTGTTCTTCAATTACTTCACTCTTTCTTCTTGGATCTTC
rJMFF034G13- GGATATGTTATGTATGTACTATTGTTCTTCAATTACTTCACTCTTTCTTCTTGGATCTTC
                      ____________________________________________________________
consensus GGATATGTTATGTATGTACTATTGTTCTTCAATTACTTCACTCTTTCTTCTTGGATCTTC
 
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rJMFF021J02- TTTGGGTACCTANAAAATCCCTTTTTGCATGCTGTTACAGCTTCNATATCGATCTTGTAA
rJMFF034G13- TTTGGGTACCTANAAAATCCCTTTTTGCATGCTGTTACAGCTTCGATATCGATCTTGTAA
                      ____________________________________________________________
consensus TTTGGGTACCTANAAAATCCCTTTTTGCATGCTGTTACAGCTTCGATATCGATCTTGTAA
 
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rJMFF021J02- ACAANAAGCTTTCTTCTCTCTCTGCAACTGATCCTATACGCCACCACGATGTGCGCAATC
rJMFF034G13- ACAANAAGCTTTCTTCTCTCTCTGCAACTGATCCTATACNCCACCACGATGTGCGCAATC
                      ____________________________________________________________
consensus ACAANAAGCTTTCTTCTCTCTCTGCAACTGATCCTATACGCCACCACGATGTGCGCAATC
 
. : . : . : . : . : . :
rJMFF021J02- GCCATAGCCACCGAGCACGCAAACATCGCCATCTCAGCCGCGGCGGCGGCGGCCCGGACA
rJMFF034G13- GCCATAGCCACCGAGCACGCAAACATCGCCATCTCAGCCGCGGCGGCGGCGGCCCGGACA
                      ____________________________________________________________
consensus GCCATAGCCACCGAGCACGCAAACATCGCCATCTCAGCCGCGGCGGCGGCGGCCCGGACA
 
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rJMFF021J02- TGATGACCTCCATTAACGCCGTCGTATCTCGACCTCGAACTGTTCCCGAAAACGTACGAC
rJMFF034G13- TGATGACCTCCATTAACGCCGTCGTATCTCGACCTCGAACTGTTCCCGAAAACGTACGAC
JMFF021J02+ TCCCGAAAACGTACGAC
JMFF034G13+ GACCTCGAACTGTTCCCGAAAACGTACGAC
                      ____________________________________________________________
consensus TGATGACCTCCATTAACGCCGTCGTATCTCGACCTCGAACTGTTCCCGAAAACGTACGAC
 
. : . : . : . : . : . :
rJMFF021J02- GCCTTCAGCGACACGAAAACTAACGACGTTACCGAACACACGGTCGCGATTCCCAGGTAC
rJMFF034G13- GCCTTCAGCGACACGAAAACTAACGACGTTACCGAACACACGGTCGCGATTCCCAGGTAC
JMFF021J02+ GCCTTCAGCGACACGAAAACTAACGACGTTACCGAACACACGGTCGCGATTCCCAGGTAC
JMFF034G13+ GCCTTCAGCGACACGAAAACTAACGACGTTACCGAACACACGGTCGCGATTCCCAGGTAC
                      ____________________________________________________________
consensus GCCTTCAGCGACACGAAAACTAACGACGTTACCGAACACACGGTCGCGATTCCCAGGTAC
 
. : . : . : . : . : . :
rJMFF021J02- GGCCCCCTCGATANACTTGGGCCGTCNCACGAACTGTACACACATAAAATGATGGCGGAG
rJMFF034G13- GGCCCCCTCGATAGACTTGGGCCGTCGCACGAACTGTACACACATANAATGATGGCGGAG
JMFF021J02+ GGCCCCCTCGATAGACTTGGGCCGTCGCACGAACTGTACACACATAGAATGATGGCGGAG
JMFF034G13+ GGCCCCCTCGATAGACTTGGGCCGTCGCACGAACTGTACACACATAGAATGATGGCGGAG
                      ____________________________________________________________
consensus GGCCCCCTCGATAGACTTGGGCCGTCGCACGAACTGTACACACATAGAATGATGGCGGAG
 
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rJMFF021J02- CG
rJMFF034G13- CGGACGATGGATAC
JMFF021J02+ CGGACGATGGATACGAGGGGGATGTCGACGAGGGAGTAGCGGAAGTCGTAGGTGGTGAGA
JMFF034G13+ CGGACGATGGATACGAGGGGGATGTCGACGAGGGAGTAGCGGAAGTCGTAGGTGGTGAGA
                      ____________________________________________________________
consensus CGGACGATGGATACGAGGGGGATGTCGACGAGGGAGTAGCGGAAGTCGTAGGTGGTGAGA
 
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JMFF021J02+ ATAGAAGACAGAGACGCCGCCGGGGACCAGGACGCCGAGAGCAGCGCCGACGGGAGAACG
JMFF034G13+ ATAGAAGACAGAGACGCCGCCGGGGACCAGGACGCCGAGAGCAGCGCCGACGGGAGAACG
                      ____________________________________________________________
consensus ATAGAAGACAGAGACGCCGCCGGGGACCAGGACGCCGAGAGCAGCGCCGACGGGAGAACG
 
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JMFF021J02+ GCGTCGGCGATTCCGACGAGAATCGGCGCGGAGAAGACCAGGAGAGAGATTAGCATGGTG
JMFF034G13+ GCGTCGGCGATTCCGACGAGAATCGGCGCGGAGAAGACCAGGAGAGAGATTAGCATGGTG
                      ____________________________________________________________
consensus GCGTCGGCGATTCCGACGAGAATCGGCGCGGAGAAGACCAGGAGAGAGATTAGCATGGTG
 
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JMFF021J02+ ATCAAGAAGAAGAGAGTCTTGATCCACCTCAACGCCCTGTTCCTCTTCTCCTCTTTCAAG
JMFF034G13+ ATCAAGAAGAAGAGAGTCTTGATCCACCTCAACGCCCTGTTCCTCTTCTCCTCTTTCAAG
                      ____________________________________________________________
consensus ATCAAGAAGAAGAGAGTCTTGATCCACCTCAACGCCCTGTTCCTCTTCTCCTCTTTCAAG
 
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JMFF021J02+ AAACTCATCGTCTTCCCGGCCTGCTCTTCTTGAATTTCCGGCGAGAAATGAAAACTGATT
JMFF034G13+ AAACTCATCGTCTTCCCGGCCTGCTCTTCTTGAATTTCCGGCGAGAAATGAAAACTGATT
                      ____________________________________________________________
consensus AAACTCATCGTCTTCCCGGCCTGCTCTTCTTGAATTTCCGGCGAGAAATGAAAACTGATT
 
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JMFF021J02+ GAATGCTTAGACCGTTGGGGGGGTTTTTGGAGGGCTACTTGGAAAGCCGGTCAAGAAGAC
JMFF034G13+ GAATGCTTAGACCGTTGGGGGGGTTTTTGGAGGGCTACTTGGAAAGCCGGTCAAGAAGAC
                      ____________________________________________________________
consensus GAATGCTTAGACCGTTGGGGGGGTTTTTGGAGGGCTACTTGGAAAGCCGGTCAAGAAGAC