clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF033P13 | Sequence | 585 | 006019 (3) | ref|XP_011072869.1| | 4e-18 | PREDICTED: uncharacterized protein LOC105157988 isoform X1 [Sesamum indicum] | 768 | 004142 (3) | ref|XP_006345129.1| | 52.4 | PREDICTED: uncharacterized protein LOC102592426 [Solanum tuberosum] |
JMFF047N19 | Sequence | 637 | 006019 (3) | ref|XP_011072870.1| | 5e-19 | PREDICTED: uncharacterized protein LOC105157988 isoform X2 [Sesamum indicum] | 375 | 004142 (3) | |||
JMSF045M20 | Sequence | 765 | 006019 (3) | ref|XP_011072870.1| | 7e-19 | PREDICTED: uncharacterized protein LOC105157988 isoform X2 [Sesamum indicum] | 747 | 004142 (3) | ref|XP_006345129.1| | 49.3 | PREDICTED: uncharacterized protein LOC102592426 [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMSF045M20+ TTTTCAAGACTTTGAGTCTTTGGA
____________________________________________________________
consensus TTTTCAAGACTTTGAGTCTTTGGA
. : . : . : . : . : . :
JMSF045M20+ TGTTGTAGACCTGATGAAGTAGGATGTTTCTTGGAATTTTCAAGACTTTGAGTCTTCGGG
____________________________________________________________
consensus TGTTGTAGACCTGATGAAGTAGGATGTTTCTTGGAATTTTCAAGACTTTGAGTCTTCGGG
. : . : . : . : . : . :
JMFF047N19+ TGTAGACTCGACGAAGAAGTAGGACGTTTCTTGGAAATGTCAAGACTTTGAGTCTTC
JMSF045M20+ TGTTGTAGACTCGACGAAGAAGTAGGACGTTTCTTGGAAATGTCAAGACTTTGAGTCTTC
____________________________________________________________
consensus TGTTGTAGACTCGACGAAGAAGTAGGACGTTTCTTGGAAATGTCAAGACTTTGAGTCTTC
. : . : . : . : . : . :
JMFF047N19+ AAATGTTGTGGACCCAACGAAGTAGGATGCTTTTTAGGTTGCTGAAATTTAGGAATACTA
JMSF045M20+ AAATGTTGTGGACCCAACGAAGTAGGATGCTTTTTAGGTTGCTGAAATTTAGGAATACTA
____________________________________________________________
consensus AAATGTTGTGGACCCAACGAAGTAGGATGCTTTTTAGGTTGCTGAAATTTAGGAATACTA
. : . : . : . : . : . :
JMFF047N19+ GTACCAGGATTGACAGGAGTCCTGGACAATGGAGATGATACATGTTTCTTAGGTGATAGG
JMSF045M20+ GTACCAGGATTGACAGGAGTCCTGGACAATGGAGATGATACATGTTTCTTAGGTGATAGG
____________________________________________________________
consensus GTACCAGGATTGACAGGAGTCCTGGACAATGGAGATGATACATGTTTCTTAGGTGATAGG
. : . : . : . : . : . :
JMFF047N19+ GGGTTTGAATGTCTAGTTATCTTTATATTGGAAGCAACATTTTGGAGTTTTGGTAGCACA
JMSF045M20+ GGGTTTGAATGTCTAGTTATCTTTATATTGGAAGCAACATTTTGGAGTTTTGGTAGCACA
JMFF033P13+ GTTATCTTTATATTGGAAGCAACATTTTGGAGTTTTGGTAGCACA
____________________________________________________________
consensus GGGTTTGAATGTCTAGTTATCTTTATATTGGAAGCAACATTTTGGAGTTTTGGTAGCACA
. : . : . : . : . : . :
JMFF047N19+ ATTGCTTCTTCAGCAGAAATATATTTTGTTCTCCCTTTTGCAACCTTCTTTTCCCAGTCA
JMSF045M20+ ATTGCTTCTTCAGCAGAAATATATTTTGTTCTCCCTTTTGCAACCTTCTTTTCCCAGTCA
JMFF033P13+ ATTGCTTCTTCAGCAGAAATATATTTTGTTCTCCCTTTTGCAACCTTCTTTTCCCAGTCA
____________________________________________________________
consensus ATTGCTTCTTCAGCAGAAATATATTTTGTTCTCCCTTTTGCAACCTTCTTTTCCCAGTCA
. : . : . : . : . : . :
JMFF047N19+ ACCCAACCACGACCACGGTACGATTTTCTTGGATATGCACACTGTAAATTCTCACGATGA
JMSF045M20+ ACCCAACCACGACCACGGTACGATTTTCTTGGATATGCACACTGTAAATTCTCACGATGA
JMFF033P13+ ACCCATCCACGACCACGGTACGATTTTCTTGGATATGCACACTGTAAATTCTCACGATGA
____________________________________________________________
consensus ACCCAACCACGACCACGGTACGATTTTCTTGGATATGCACACTGTAAATTCTCACGATGA
. : . : . : . : . : . :
JMFF047N19+ TCCTTAGAAGAGATCGTAAAATTTGGTGCCTCAGAAAGCCCATTCTTTCCACATGATGAC
JMSF045M20+ TCCTTAGAAGAGATCGTAAAATTTGGTGCCTCAGAAAGCCCATTCTTTCCACATGATGAC
JMFF033P13+ TCCTTAGAAGAGATCGTAAAATTTGGTGCCTCAGAAAGCCCATTCTTTCCACATGATGAC
____________________________________________________________
consensus TCCTTAGAAGAGATCGTAAAATTTGGTGCCTCAGAAAGCCCATTCTTTCCACATGATGAC
. : . : . : . : . : . :
JMFF047N19+ TGATTCCCGTCCCTAGGAGTGCATTCTTCACATATCCAAACCTCTGGTTGCTCTATACGA
JMSF045M20+ TGATTCCCGTCCCTAGGAGTGCATTCTTCACATATCCAAACCTCTGGTTGCTCTATACGA
JMFF033P13+ TGATTCCCGTCCCTAGGAGTGCATTCTTCACATATCCAAACCTCTGGTTGCTCTATACGA
____________________________________________________________
consensus TGATTCCCGTCCCTAGGAGTGCATTCTTCACATATCCAAACCTCTGGTTGCTCTATACGA
. : . : . : . : . : . :
JMFF047N19+ AATGTCTCCATGCAATAGAGATGTTCTTGGTTAATTTTACACTTCTCACATGTAATAATT
JMSF045M20+ AATGTCTCCATGCAATAGAGATGTTCTTGGTTAATTTTACACTTCTCACATGTAATAATT
JMFF033P13+ AATGTCTCCATGCAATAGAGATGTTCTTGGTTAATTTTACACTTCTCACATGTAATAATT
____________________________________________________________
consensus AATGTCTCCATGCAATAGAGATGTTCTTGGTTAATTTTACACTTCTCACATGTAATAATT
. : . : . : . : . : . :
JMFF047N19+ GTCTCTGCAAACCCAATATCACCACAGATATCACAGCGTTCCGC
JMSF045M20+ GTCTCTGCAAACCCAATATCACCACAGATATCACAGCGTTCCGC
JMFF033P13+ GTCTCTGCAAACCCAATATCACCACAGATATCACAGCGTTCCGCTTTTAGTTACTGGCAA
____________________________________________________________
consensus GTCTCTGCAAACCCAATATCACCACAGATATCACAGCGTTCCGCTTTTAGTTACTGGCAA
. : . : . : . : . : . :
JMFF033P13+ TGGATGAGGACGTATAGAATTAGCGCTTCACTGCAGCCAATATTTATATCCCTCCACATA
____________________________________________________________
consensus TGGATGAGGACGTATAGAATTAGCGCTTCACTGCAGCCAATATTTATATCCCTCCACATA
. : . : . : . : . : . :
JMFF033P13+ TTTAGTCAAATGGATCATAAATGCTAGTTCTCTTCAGCCTTCATTGTTCAAACCCTTTTT
____________________________________________________________
consensus TTTAGTCAAATGGATCATAAATGCTAGTTCTCTTCAGCCTTCATTGTTCAAACCCTTTTT
. : . : . : . : . : . :
JMFF033P13+ CCCATGGACATGGAGCAATGGTGGTGGGCCTGTAGTGCTGAGATTCTCCTCAACAAAATC
____________________________________________________________
consensus CCCATGGACATGGAGCAATGGTGGTGGGCCTGTAGTGCTGAGATTCTCCTCAACAAAATC