Contig 006012:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF032E13Sequence469006012 (3)ref|XP_009775775.1|6e-46PREDICTED: glucan endo-1,3-beta-glucosidase, acidic isoform GI9 [Nicotiana sylv
JMFF040G18Sequence462006012 (3)ref|XP_009775775.1|3e-44PREDICTED: glucan endo-1,3-beta-glucosidase, acidic isoform GI9 [Nicotiana sylv712018053sp|P52398.1|E13K_TOBAC4e-67RecName: Full=Glucan endo-1,3-beta-glucosidase, acidic isoform GL161; AltName:
JMFN006F12Sequence410006012 (3)sp|P23547.1|E13G_TOBAC2e-41RecName: Full=Glucan endo-1,3-beta-glucosidase, acidic isoform GI9; AltName: Fu

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040G18+                          TGCAACCCGGAAGCCGCCAAGGAATTGTACACATTCTGCATCACC
JMFN006F12+                                       CCGCCAAGGAATTGTACACATTCTGCATCACC
JMFF032E13+                      TTCCTGCAACCCGGAAGCCGCCAAGGAATTGTACACATTCTGCATCACC
                      ____________________________________________________________
consensus                        TTCCTGCAACCCGGAAGCCGCCAAGGAATTGTACACATTCTGCATCACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040G18+           GGGAGAACGAAAGCGGCGAACTCACCGGAGGGGGTGTTAGGCAAAACCTCGTTCCCTACA
JMFN006F12+           GGGAGAACGAAAGCGACGAACTCACCGAAGGGGGTGTTAGGCAAAACCTCGTTCCCTACA
JMFF032E13+           GGGAGAACGAAAGCGGCGAACTCACCGGAGGGGGTGTTAGGCAAAACCTCGTTCCCTACA
                      ____________________________________________________________
consensus             GGGAGAACGAAAGCGGCGAACTCACCGGAGGGGGTGTTAGGCAAAACCTCGTTCCCTACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040G18+           GCTAGGTACTTGAATTTCACATCCGGATAGTAGTTCTTGACGAAGGTTTGGACCCATTGG
JMFN006F12+           GCTAGGTACTTGAATTTCACATCCGGATAGTAGTTCTTGACGAAGGTTTGGACCCATTGG
JMFF032E13+           GCTAGGTACTTGAATTTCACATCCGGATAGTAGTTCTTGACGAAGGTTTGGACCCATTGG
                      ____________________________________________________________
consensus             GCTAGGTACTTGAATTTCACATCCGGATAGTAGTTCTTGACGAAGGTTTGGACCCATTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040G18+           TCGGCGGCGGCGGGATCGGTGAGCGATTGCAGGGTGGGATTAGGGATGCAGAGAATGACT
JMFN006F12+           TCGGCGGCGGCGGGATCGGTGAGCGATTGCAGGGTGGGATTAGGGATGCAGAGAATGACT
JMFF032E13+           TCGGCGGCGGCGGGATCGGTGAGCGATTGCAGGGTGGGATTAGGGATGCAGAGAATGACT
                      ____________________________________________________________
consensus             TCGGCGGCGGCGGGATCGGTGAGCGATTGCAGGGTGGGATTAGGGATGCAGAGAATGACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040G18+           TGGATTTGGGATCCCCGGAGAGCATCGAGAACCGGCGGGACGGGGTCGAAAACTCGCATG
JMFN006F12+           TGGATTTGGGATCCCCGGAGAGCATCGAGAACCGGCGGGACGGGGTCGAAAACTCGCATG
JMFF032E13+           TGGATTTGGGATCCCCGGAGAGCATCGAGAACCGGCGGGACGGGGTCGAAAACTCGCATG
                      ____________________________________________________________
consensus             TGGATTTGGGATCCCCGGAGAGCATCGAGAACCGGCGGGACGGGGTCGAAAACTCGCATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040G18+           CTGCTGATCCCATTTTGCTTGTACAGGTTAATCACTTGTGGTTCCGATGGCAAATCATTT
JMFN006F12+           CTGCTGATCCCATTTTGCTTGTACAGGTTAATCACTTGTGGTTCCGATGGCAAATCATTT
JMFF032E13+           CTGCTGATCCCATTTTGCTTGTACAGGTTAATCACTTGTGGTTCCGATGGCAAATCATTT
                      ____________________________________________________________
consensus             CTGCTGATCCCATTTTGCTTGTACAGGTTAATCACTTGTGGTTCCGATGGCAAATCATTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040G18+           CCATTCCTCCCATAACAAACACCAACCGATTCTGCCACTGTTGTTCGAAGGGTGACAAAG
JMFN006F12+           CCATTCCTCCCATAACAAACTCCAACCGATTCTGCCACTGTTGTTTCTAGGGTGACAAAG
JMFF032E13+           CCATTCCTCCCATAACAAACACCAACCGATTCTGCCACTGTTGTTTGAAGGGTGACAAAG
                      ____________________________________________________________
consensus             CCATTCCTCCCATAACAAACACCAACCGATTCTGCCACTGTTGTTTGAAGGGTGACAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF040G18+           AGGAGAATAGCTGCAAAGAAGCAATGGGTTGCCATGACTCAATCAAGTTGCATTGGT   
JMFN006F12+           AGGAG                                                       
JMFF032E13+           AGGAGAATAGCTGCAAAGAAGCAATGGGTTGCCATGACTCAATCAAGTTGCATTGGTGCC
                      ____________________________________________________________
consensus             AGGAGAATAGCTGCAAAGAAGCAATGGGTTGCCATGACTCAATCAAGTTGCATTGGTGCC