| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF031P12 | Sequence | 574 | 006011 (4) | ref|XP_004231762.1| | 1e-70 | PREDICTED: probable metal-nicotianamine transporter YSL6 [Solanum lycopersicum] | 798 | 012667 (3) | ref|XP_009613490.1| | 5e-138 | PREDICTED: probable metal-nicotianamine transporter YSL6 [Nicotiana tomentosifo |
| JMFS151D06 | Sequence | 614 | 006011 (4) | ref|XP_004231762.1| | 1e-95 | PREDICTED: probable metal-nicotianamine transporter YSL6 [Solanum lycopersicum] | |||||
| JMSF008N04 | Sequence | 368 | 006011 (4) | ref|XP_004231762.1| | 5e-61 | PREDICTED: probable metal-nicotianamine transporter YSL6 [Solanum lycopersicum] | 783 | 012667 (3) | ref|XP_009757311.1| | 3e-135 | PREDICTED: probable metal-nicotianamine transporter YSL6 [Nicotiana sylvestris] |
| JMSF032F08 | Sequence | 709 | 006011 (4) | ref|XP_004231762.1| | 8e-110 | PREDICTED: probable metal-nicotianamine transporter YSL6 [Solanum lycopersicum] | 740 | 012667 (3) | gb|EYU31834.1| | 5e-85 | hypothetical protein MIMGU_mgv1a002047mg [Erythranthe guttata] |
This contig is upended
. : . : . : . : . : . :
JMSF032F08+ ATTAGCATTGCCGT
____________________________________________________________
consensus ATTAGCATTGCCGT
. : . : . : . : . : . :
JMFS151D06+ GCGAAGTGGGAC
JMSF032F08+ GGCAGTACCACTGGGGTATGTTAGTTTATAATCCATAACCATGACCTTGCGAAGTGGGAC
____________________________________________________________
consensus GGCAGTACCACTGGGGTATGTTAGTTTATAATCCATAACCATGACCTTGCGAAGTGGGAC
. : . : . : . : . : . :
JMFS151D06+ AAGGCTGAAAAGGCCAAGAAAACTGACAACAAATATGAAACCCATCATCCATAACAGCCC
JMSF032F08+ AAGGCTGAAAAGGCCAAGAAAACTGACAACAAATATGAAACCCATCATCCATAACAGCCC
____________________________________________________________
consensus AAGGCTGAAAAGGCCAAGAAAACTGACAACAAATATGAAACCCATCATCCATAACAGCCC
. : . : . : . : . : . :
JMFS151D06+ TGGATTCTTCACATCCTCTGCTCTATTGCCAGGGTAATCTGGCCCAATGAGCTGGTATGT
JMSF032F08+ TGGATTCTTCACATCCTCTGCTCTATTGCCAGGGTAATCTGGCCCAATGAGCTGGTATGT
JMFF031P12+ TGCCAGGGTAATCTGGCCCAATGAGCTGGTATGT
____________________________________________________________
consensus TGGATTCTTCACATCCTCTGCTCTATTGCCAGGGTAATCTGGCCCAATGAGCTGGTATGT
. : . : . : . : . : . :
JMFS151D06+ TTTCTCATCCATAGAAAGCAAATATGATCCAAATCCACCGCTAAAGGCGAGGCCATAGCA
JMSF008N04+ TTTCTCATCCATAGAAAGCAAATATGATCCAAATCCACCGCTAAAGGCGAGGCCATAGCA
JMSF032F08+ TTTCTCATCCATAGAAAGCAAATATGATCCAAATCCACCGCTAAAGGCGAGGCCATAGCA
JMFF031P12+ TTTCTCATCCATAGAAAGCAAATATGATCCAAATCCACCGCTAAAGGCGAGGCCATAGCA
____________________________________________________________
consensus TTTCTCATCCATAGAAAGCAAATATGATCCAAATCCACCGCTAAAGGCGAGGCCATAGCA
. : . : . : . : . : . :
JMFS151D06+ AGCAACAACACAGGTCTGAATAACGGTATTCTCTTGTCTGGTAAACGGCTGAACCGAAAA
JMSF008N04+ AGCAACAACACAGGTCTGAATAACGGTATTCTCTTGTCTGGTAAACGGCTGAACCGAAAA
JMSF032F08+ AGCAACAACACAGGTCTGAATAACGGTATTCTCTTGTCTGGTAAACGGCTGAACCGAAAA
JMFF031P12+ AGCAACAACACAGGTCTGAATAACGGTATTCTCTTGTCTGGTAAACGGCTGAACCGAAAA
____________________________________________________________
consensus AGCAACAACACAGGTCTGAATAACGGTATTCTCTTGTCTGGTAAACGGCTGAACCGAAAA
. : . : . : . : . : . :
JMFS151D06+ GCCGAGTTTGGAGAGAAAGGCGGTCCAACTCTTGACGAAGAAGAAGCCGAGCAAACCAGC
JMSF008N04+ GCCGAGTTTGGAGAGAAAGGCGGTCCAACTCTTGACGAAGAAGAAGCCGAGCAAACCAGC
JMSF032F08+ GCCGAGTTTGGAGAGAAAGGCGGTCCAACTCTTGACGAAGAAGAAGCCGAGCAAACCAGC
JMFF031P12+ GCCGAGTTTGGAGAGAAAGGCGGTCCAACTCTTGACGAAGAAGAAGCCGAGCAAACCAGC
____________________________________________________________
consensus GCCGAGTTTGGAGAGAAAGGCGGTCCAACTCTTGACGAAGAAGAAGCCGAGCAAACCAGC
. : . : . : . : . : . :
JMFS151D06+ GGCAACATTGAGGGAGGGGATGATCCCAACCGTGAGATTGAGCTTATGGGTGATTATACA
JMSF008N04+ GGCAACATTGAGGGAGGGGATGATCCCAACCGTGAGATTGAGCTTATGGGTGATTATACA
JMSF032F08+ GGCAACATTGAGGGAGGGGATGATCCCAACCGTGAGATTGAGCTTATGGGTGATTATACA
JMFF031P12+ GGCAACATTGAGGGAGGGGATGATCCCAACCGTGAGATTGAGCTTATGGGTGATTATACA
____________________________________________________________
consensus GGCAACATTGAGGGAGGGGATGATCCCAACCGTGAGATTGAGCTTATGGGTGATTATACA
. : . : . : . : . : . :
JMFS151D06+ GAAGAGGGTTCCAAGCACCGCGCTCACCACCAGACCCCTAACAGTAATCTGCTCCTTCCA
JMSF008N04+ GAAGAGGGTTCCAAGCACCGCGCTCACCACCAGACCCCTAACAGTAATCTGCTCCTTCCA
JMSF032F08+ GAAGAGGGTTCCAAGCACCGCGCTCACCACCAGACCCCTAACAGTAATCTGCTCCTTCCA
JMFF031P12+ GAAGAGGGTTCCAAGCACCGCGCTCACCACCAGACCCCTAACAGTAATCTGCTCCTTCCA
____________________________________________________________
consensus GAAGAGGGTTCCAAGCACCGCGCTCACCACCAGACCCCTAACAGTAATCTGCTCCTTCCA
. : . : . : . : . : . :
JMFS151D06+ ATCTGGAATCTCATCCACCTCCGCCTCCACTTTGTTATCATCTAACAAGTGCTCCGTTAT
JMSF008N04+ ATCTGGAATCTCATCCACCTCCGCCTCCACTTTGTTATCATCTAACAAGTGCTCCGTT
JMSF032F08+ ATCTGGAATCTCATCCACCTCCGCCTCCACTTTGTTATCATCTAACAAGTGCTCCGTTAT
JMFF031P12+ ATCTGGAATCTCATCCACCTCCGCCTCCACTTTGTTATCATCTAACAAGTGCTCCGTTAT
____________________________________________________________
consensus ATCTGGAATCTCATCCACCTCCGCCTCCACTTTGTTATCATCTAACAAGTGCTCCGTTAT
. : . : . : . : . : . :
JMFS151D06+ CTCTGCTGCCGCATCCCCATTGCTTACGGTTCCCATCCTTGTTGGTGACAGCTAGGAGGA
JMSF032F08+ CTCTGCTGCCGCATCCCCATTGCTTACGGTTCCCATCCTTGTTGGTGACAGCTAGGAGGA
JMFF031P12+ CTCTGCTGCCGCATCCCCATTGCTTACGGTTCCCATCCTTGTTGGTGACAGCTAGGAGGA
____________________________________________________________
consensus CTCTGCTGCCGCATCCCCATTGCTTACGGTTCCCATCCTTGTTGGTGACAGCTAGGAGGA
. : . : . : . : . : . :
JMFS151D06+ GTGAGAAGAGGTGGAGAGATCAGAAGATTGATCGTGAATGGTGGTGATGAAGATGAAGGG
JMSF032F08+ GTGAGAAGAGGTGGAGAGATCAGAAGATTGATCGTGAATGGTGGTGATGAAGATGAAGGG
JMFF031P12+ GTGAGAAGAGGTGGAGAGATCAGAAGATTGATCGTGAATGGTGGTGATGAAGATGAAGGG
____________________________________________________________
consensus GTGAGAAGAGGTGGAGAGATCAGAAGATTGATCGTGAATGGTGGTGATGAAGATGAAGGG
. : . : . : . : . : . :
JMFS151D06+ CT
JMSF032F08+ CTGGGAAGTTGAAGAAAAGACAAGAAAAGAGGTT
JMFF031P12+ CTGGGAAGTTGAAGAAAAGACAAGAAAAGAGGTTGCTTGCTGGATTGGTACTTACTACTT
____________________________________________________________
consensus CTGGGAAGTTGAAGAAAAGACAAGAAAAGAGGTTGCTTGCTGGATTGGTACTTACTACTT