| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF031I18 | Sequence | 571 | 006009 (5) | ref|XP_009587556.1| | 7e-39 | PREDICTED: adenylyl-sulfate kinase 3-like [Nicotiana tomentosiformis] | 819 | 006009 (5) | ref|XP_006364411.1| | 2e-93 | PREDICTED: adenylyl-sulfate kinase, chloroplastic-like isoform X1 [Solanum tube |
| JMFF044F11 | Sequence | 635 | 006009 (5) | ref|XP_009587556.1| | 9e-55 | PREDICTED: adenylyl-sulfate kinase 3-like [Nicotiana tomentosiformis] | 617 | 006009 (5) | emb|CDY08724.1| | 4e-29 | BnaA06g25000D [Brassica napus] |
| JMFS066G08 | Sequence | 519 | 006009 (5) | ref|XP_006364411.1| | 6e-25 | PREDICTED: adenylyl-sulfate kinase, chloroplastic-like isoform X1 [Solanum tube | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF044F11- ACTCGAATGAGATGACTTCATTTATTCCATTA
JMFS066G08+ ACTCGAATGAGATGACTTCATTTATTCCATTA
rJMFF031I18- ATGACTTCATTTATTCCATTA
____________________________________________________________
consensus ACTCGAATGAGATGACTTCATTTATTCCATTA
. : . : . : . : . : . :
rJMFF044F11- TCATACAACTTGTACAAGAGTTTCAACACTGGAAATTTGAAAACCATACATAAAGTTCAC
JMFS066G08+ TCATACAACTTGTACAAGAGTTTCAACACTGGAAATTTGAAAACCATACATAAAGTTCAC
rJMFF031I18- TCATACAACTTGTACAAGAGTTTCAACACTGGAAATTTGAAAACCATACATAAAGTTCAC
____________________________________________________________
consensus TCATACAACTTGTACAAGAGTTTCAACACTGGAAATTTGAAAACCATACATAAAGTTCAC
. : . : . : . : . : . :
rJMFF044F11- ACTATTTCAGGCCTATCTACTACCAAACACTAGCAAGCATAAATGTCACAGGCAGTGACG
JMFS066G08+ ACTATTTCAGGCCTATCTACTACCAAACACTAGCAAGCATAAATGTCACAGGCAGTGACG
rJMFF031I18- ACTATTTCAGGCCTATCTACTACCAAACACTAGCAAGCATAAATGTCACAGGCAGTGACG
____________________________________________________________
consensus ACTATTTCAGGCCTATCTACTACCAAACACTAGCAAGCATAAATGTCACAGGCAGTGACG
. : . : . : . : . : . :
rJMFF044F11- ATGCAATGCATAAATGATTTTACATTTTCTTTTCTTTATTCAATATTGAATTAAGCATTA
JMFS066G08+ ATGCAATGCATAAATGATTTTACATTTTCTTTTCTTTATTCAATATTGAATTAAGCATTA
rJMFF031I18- ATGCAATGCATAAATGATTTTACATTTTCTTTTCTTTATTCAATATTGAATTAAGCATTA
____________________________________________________________
consensus ATGCAATGCATAAATGATTTTACATTTTCTTTTCTTTATTCAATATTGAATTAAGCATTA
. : . : . : . : . : . :
rJMFF044F11- AGGAAACGCGAGATTTCCTTACTGCAAAACAAATAAATGCACGGGTACATGGCATACAAG
JMFS066G08+ AGGAAACGCGAGATTTCCTTACTGCAAAACAAATAAATGCACGGGTACATGGCATACAAG
rJMFF031I18- AGGAAACGCGAGATTTCCTTACTGCAAAACAAATAAATGCACGGGTACATGGCATACAAG
____________________________________________________________
consensus AGGAAACGCGAGATTTCCTTACTGCAAAACAAATAAATGCACGGGTACATGGCATACAAG
. : . : . : . : . : . :
rJMFF044F11- GATGGAAGATCTATTGACATGGACTTAGCCCGTTAGCCATGAGGCAGCTAGCCAGCTATG
JMFS066G08+ GATGGAAGATCTATTGACATGGACTTAGCCCGTTAGCCATGAGGCAGCTAGCCAGCTATG
rJMFF031I18- GATGGAAGATCTATTGACATGGACTTAGCCCGTTAGCCATGAGGCAGCTAGCCAGCTATG
____________________________________________________________
consensus GATGGAAGATCTATTGACATGGACTTAGCCCGTTAGCCATGAGGCAGCTAGCCAGCTATG
. : . : . : . : . : . :
rJMFF044F11- TTTTCAGGTACCCCTTTTCCTCCAGGTAAGAGATCACAACCTCAGCCATATCATATGGAG
JMFS066G08+ TTTTCAGGTACCCCTTTTCCTCCAGGTAAGAGATCACAACCTCAGCCATATCATATGGAG
rJMFF031I18- TTTTCAGGTACCCCTTTTCCTCCAGGTAAGAGATCACAACCTCAGCCATATCATATGGAG
____________________________________________________________
consensus TTTTCAGGTACCCCTTTTCCTCCAGGTAAGAGATCACAACCTCAGCCATATCATATGGAG
. : . : . : . : . : . :
rJMFF044F11- AATCATTGAATCCACGGTTAAGCCTCAGCACTATCTCTGAATTCTCTGGTGGCTCATATG
JMFS066G08+ AATCATTGAATCCACGGTTAAGCCTCAGCACTATCTCTGAATTCTCTGGTGGCTCATATG
rJMFF031I18- AATCATTGAATCCACGGTTAAGCCTCAGCACTATCTCTGAATTCTCTGGTGGCTCATATG
____________________________________________________________
consensus AATCATTGAATCCACGGTTAAGCCTCAGCACTATCTCTGAATTCTCTGGTGGCTCATATG
. : . : . : . : . : . :
rJMFF044F11- GATCGTCAATACCAGTGAAACCT
JMFS066G08+ GATCGTCAATACCAGTGAAACCTTTTATTTTTCCTGCTCGGGCAAGTTTGTACAATCCCT
rJMFF031I18- GATCGTCAATACCAGTGAAACCTTTTATTTTTCCTGCTCGGGCAAGTTTGTACAATCCCT
____________________________________________________________
consensus GATCGTCAATACCAGTGAAACCTTTTATTTTTCCTGCTCGGGCAAGTTTGTACAATCCCT
. : . : . : . : . : . :
JMFS066G08+ TGGG
rJMFF031I18- TGGGGTCTCTTGCCTCACAAACATCTAAAGGCACATCCAAGAATACCTCAATGAAATCTC
____________________________________________________________
consensus TGGGGTCTCTTGCCTCACAAACATCTAAAGGCACATCCAAGAATACCTCAATGAAATCTC
. : . : . : . : . : . :
rJMFF031I18- CTTCTGGAAGTAAAGCACGACAAGCATCCCGCTCCTTTCTGTATGGAGATATCAAACTGA
____________________________________________________________
consensus CTTCTGGAAGTAAAGCACGACAAGCATCCCGCTCCTTTCTGTATGGAGATATCAAACTGA
. : . : . : . : . : . :
rJMFF031I18- CAATGCAAATGACCCCAGCATCTGCAAAAAGCTTTGCCACCTCCCCAACCCGTCTAATGT
____________________________________________________________
consensus CAATGCAAATGACCCCAGCATCTGCAAAAAGCTTTGCCACCTCCCCAACCCGTCTAATGT
. : . : . : . : . : . :
rJMFF031I18- TCTCTGTTCGATCTTCTGCCCTAAAACTAAGATCACTACTCAGACCATGGCGGACATTAT
JMFF044F11+ CTAAGATCACTACTCAGACCATGGCGGACATTAT
____________________________________________________________
consensus TCTCTGTTCGATCTTCTGCCCTAAAACTAAGATCACTACTCAGACCATGGCGGACATTAT
. : . : . : . : . : . :
rJMFF031I18- CTCCATCCAGAATGTAAGTAAGCTTTCTCCGAGCATGTAAGCCTCTACTTANAGCACATG
JMFF044F11+ CTCCATCCAGAATGTAAGTAAGCTTTCTCCGAGCATGTAAGC--CTACTTAGAGCACATG
____________________________________________________________
consensus CTCCATCCAGAATGTAAGTAAGCTTTCTCCGAGCATGTAAGCCTCTACTTAGAGCACATG
. : . : . : . : . : . :
rJMFF031I18- CTACACTGCTCTTTCC
JMFF044F11+ CTACACTGCTCTTTCCTGAACCACTGAGACCAGTAATCCATACAACACAGCCCTTCTGCT
____________________________________________________________
consensus CTACACTGCTCTTTCCTGAACCACTGAGACCAGTAATCCATACAACACAGCCCTTCTGCT
. : . : . : . : . : . :
JMFF044F11+ GAAGCAACTCCTCCCTGTCACTCCTCTCTACCGAGCATTTGTGCCAAAAAATATCTGTAG
____________________________________________________________
consensus GAAGCAACTCCTCCCTGTCACTCCTCTCTACCGAGCATTTGTGCCAAAAAATATCTGTAG
. : . : . : . : . : . :
JMFF044F11+ AGTTCCCAACTGTATAAGCCTGAAGCCTTTCTTTACCAGAGAGACCATCACAATCATTGA
JMFF031I18+ TACCAGAGAGACCATCACAATCATTGA
____________________________________________________________
consensus AGTTCCCAACTGTATAAGCCTGAAGCCTTTCTTTACCAGAGAGACCATCACAATCATTGA
. : . : . : . : . : . :
JMFF044F11+ CGAGCACGTCCTGCTGGGAGCCGCACCCAGACGGATGAGAATTTTCGTTTTTATTGCCAT
JMFF031I18+ CGAGCACGTCCCGCTGGGAGCCGCACCCAGACGGATGAGAATTTTCGTTTTTATTGCCAT
____________________________________________________________
consensus CGAGCACGTCCTGCTGGGAGCCGCACCCAGACGGATGAGAATTTTCGTTTTTATTGCCAT
. : . : . : . : . : . :
JMFF044F11+ TGATTTGCGAAGATCTAGAAGTTTCAAGTGCCCTAATTGGGCCAATAAAGCGGGATTTCA
JMFF031I18+ TGATTTGCGAAGATCTAGAAGTTTCAAGTGCCCTAATTGGGCCAATAAAGCGGGATTTCA
____________________________________________________________
consensus TGATTTGCGAAGATCTAGAAGTTTCAAGTGCCCTAATTGGGCCAATAAAGCGGGATTTCA
. : . : . : . : . : . :
JMFF044F11+ CCTCGCCGCCAGTAATGGAGGAGCTGAAGCCTTTGCCTACGCCGGAATTACACCCCAGCA
JMFF031I18+ CCTCGCCGCCAGTAATGGAGGAGCTGAAGCCTTTGCCTACGCCGGAATTACACCCCAGCA
____________________________________________________________
consensus CCTCGCCGCCAGTAATGGAGGAGCTGAAGCCTTTGCCTACGCCGGAATTACACCCCAGCA
. : . : . : . : . : . :
JMFF044F11+ ACTTCAAAAACCCTACCTTTCCCGATTTTGACGACACAAAGTAAAATTCCGGCGACCGAG
JMFF031I18+ ACTTCAAAAACCCTACCTTTCCCGATTTTGACGACACAAAGTAAAATTCCGGCGACCGAG
____________________________________________________________
consensus ACTTCAAAAACCCTACCTTTCCCGATTTTGACGACACAAAGTAAAATTCCGGCGACCGAG
. : . : . : . : . : . :
JMFF044F11+ AAAAATTAAGCAATGCTTTAGTAGCCGCCATCTTTCCGAATCGCAAGGTATATAGCCAAT
JMFF031I18+ AAAAATTAAGCAATGCTTTAGTAGCCGCCATCTTTCCGAATCGCAAGGTATATAGCCAAT
____________________________________________________________
consensus AAAAATTAAGCAATGCTTTAGTAGCCGCCATCTTTCCGAATCGCAAGGTATATAGCCAAT
. : . : . : . : . : . :
JMFF044F11+ AAACACTCTGGTAGTCTGGTACTGGTTTTCAC
JMFF031I18+ AAACACTCTGGTAGTCTGGTACTGGTTTTCACCAAAAGAGAGGGAGATGAAAAGGTAGCA
____________________________________________________________
consensus AAACACTCTGGTAGTCTGGTACTGGTTTTCACCAAAAGAGAGGGAGATGAAAAGGTAGCA
. : . : . : . : . : . :
JMFF031I18+ ATTAGAAGGCGTTACGGAAGCGCACTCAATTATTTGAGGTTTTCCAGCTCATTTTAACAT
____________________________________________________________
consensus ATTAGAAGGCGTTACGGAAGCGCACTCAATTATTTGAGGTTTTCCAGCTCATTTTAACAT