Contig 006005:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030L14Sequence473006005 (3)ref|XP_009772616.1|57.8PREDICTED: uncharacterized protein LOC104222969 [Nicotiana sylvestris]734006964 (2)emb|CDP08820.1|2e-77unnamed protein product [Coffea canephora]
JMFF041A07Sequence650006005 (3)ref|XP_009632038.1|291PREDICTED: uncharacterized protein LOC104121694 [Nicotiana tomentosiformis]
JMFF045J23Sequence627006005 (3)ref|XP_009632038.1|158PREDICTED: uncharacterized protein LOC104121694 [Nicotiana tomentosiformis]609006964 (2)emb|CDP08820.1|6e-36unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF041A07+                               CCAAATTAGCTCCCCCAAAACCTTCGAATCCGTTTCCTCA
                      ____________________________________________________________
consensus                                 CCAAATTAGCTCCCCCAAAACCTTCGAATCCGTTTCCTCA
 
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JMFF041A07+           ACCCATTGAGCCGACTTCAAGAGCCCATTATGAACAAACCCCCCATCAAACTCAGCCTGC
                      ____________________________________________________________
consensus             ACCCATTGAGCCGACTTCAAGAGCCCATTATGAACAAACCCCCCATCAAACTCAGCCTGC
 
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JMFF041A07+           CCGAGCTTGTCATCGAGCAGGACAAGATAATCACTCTCCTTAGCCAAGTTAAGACCCCTA
                      ____________________________________________________________
consensus             CCGAGCTTGTCATCGAGCAGGACAAGATAATCACTCTCCTTAGCCAAGTTAAGACCCCTA
 
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JMFF041A07+           ATAGCCACAACTATTTCCTCACTGCCATGATCGAGGTATATCATATAAGGCGCCACTTTT
                      ____________________________________________________________
consensus             ATAGCCACAACTATTTCCTCACTGCCATGATCGAGGTATATCATATAAGGCGCCACTTTT
 
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JMFF041A07+           CCCTGAGTATCCTCATAACTTCTCCTGAGAACTATCCAATCCAGATCAACACCATACCCT
JMFF045J23+                                            ATCCAATCCAGATCAACACCATACCCT
                      ____________________________________________________________
consensus             CCCTGAGTATCCTCATAACTTCTCCTGAGAACTATCCAATCCAGATCAACACCATACCCT
 
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JMFF041A07+           CCAGGAGGAGCCCAGAGAGGGTTTCTAAGATCATCCTCATAAACAGACAGAATATAGCGA
JMFF045J23+           CCAGGAGGAGCCCAGAGAGGGTTTCTAAGATCATCCTCATAAACAGACAGAATATAGCGA
                      ____________________________________________________________
consensus             CCAGGAGGAGCCCAGAGAGGGTTTCTAAGATCATCCTCATAAACAGACAGAATATAGCGA
 
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JMFF041A07+           CAAAGGCGAGGCACAGGCTCAAATTCACTAGCGGTTGCAAGGCCCCAGTTCTCACTTTCC
JMFF045J23+           CAAAGGCGAGGCACAGGCTCAAATTCACTAGCGGTTGCAAGGCCCCAGTTCTCACTTTCC
                      ____________________________________________________________
consensus             CAAAGGCGAGGCACAGGCTCAAATTCACTAGCGGTTGCAAGGCCCCAGTTCTCACTTTCC
 
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JMFF041A07+           CTTCCAGCAGTGTAAAGAAACTTCTTCCACGCCCAACGGGCACAGGCTAAACAGTATACA
JMFF045J23+           CTTCCAGCAGTGTAAAGAAACTTCTTCCACGCCCAACGGGCACAGGCTAAACAGTATACA
JMFF030L14+                  CAGTGTAAAGAAACTTNTTCCACGCCCAACGGGCACAGGCTAAACAGTATACA
                      ____________________________________________________________
consensus             CTTCCAGCAGTGTAAAGAAACTTCTTCCACGCCCAACGGGCACAGGCTAAACAGTATACA
 
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JMFF041A07+           CATTCAACAATTGGCAGGCAGCACGCAAATGACATCGGTGCCTACCAAGCT         
JMFF045J23+           CATTCAACAATTGGCAGGCAGCACGCAAATGACATCGGTGCCTACCAAGCTATCATCTTC
JMFF030L14+           CATTCAACAATTGGCAGGCAGCACGCAAATGACATCGGTGCCTACCAAGCTATCATCTTC
                      ____________________________________________________________
consensus             CATTCAACAATTGGCAGGCAGCACGCAAATGACATCGGTGCCTACCAAGCTATCATCTTC
 
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JMFF045J23+           AAACACTTCAAAAATCACAACTTTCTAAAACCCAACCAAAGAAATCAAACATTCATAGTA
JMFF030L14+           AAACACTTCAAAAATCACAACTTTCTAAAACCCAACCAAAGAAATCAAACATTCATAGTA
                      ____________________________________________________________
consensus             AAACACTTCAAAAATCACAACTTTCTAAAACCCAACCAAAGAAATCAAACATTCATAGTA
 
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JMFF045J23+           CCTATGCTTCCGGAATCGGATAATTTTGGAGAAACTAAAGCTTGGGTATCAAGAAATTGG
JMFF030L14+           CCTATGCTTCCGGAATCGGATAATTTTGGAGAAACTAAAGCTTGGGTATCAAGAAATTGG
                      ____________________________________________________________
consensus             CCTATGCTTCCGGAATCGGATAATTTTGGAGAAACTAAAGCTTGGGTATCAAGAAATTGG
 
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JMFF045J23+           GTTTTTTTTCCCCGGAATTTATGAAAAATTAGGACAAGAAATAGTAAAATAAGCTAAAAA
JMFF030L14+           GTTTTTTTTCCCCGGAATTTATGAAAAATTAGGACAAGAAATAGTAAAATAAGCTAAAAA
                      ____________________________________________________________
consensus             GTTTTTTTTCCCCGGAATTTATGAAAAATTAGGACAAGAAATAGTAAAATAAGCTAAAAA
 
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JMFF045J23+           TACCTGATAAAAGAAGAGGAAAGCCCAACACCCATATGACAAGAGTGAAGAATACTGGTC
JMFF030L14+           TACCTGATAAAAGAAGAGGAAAGCCCAACACCCATATGACAAGAGTGAAGAATACTGGTC
                      ____________________________________________________________
consensus             TACCTGATAAAAGAAGAGGAAAGCCCAACACCCATATGACAAGAGTGAAGAATACTGGTC
 
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JMFF045J23+           CAGAAAGGATAGTAATAGTGGAAGATTGAAGTTGTATTAATCATCGGCAGGAAGTCCCAC
JMFF030L14+           CAGAAAGGATAGTAATAGTGGAAGATTGAAGTTGTATTAATCATCGGCAGGAAGTCCCAC
                      ____________________________________________________________
consensus             CAGAAAGGATAGTAATAGTGGAAGATTGAAGTTGTATTAATCATCGGCAGGAAGTCCCAC
 
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JMFF045J23+           GAAGACACATGAAATTGCAGACATGAAGAATGGGGGCAAAAGAGACAATATTTGAACTTT
JMFF030L14+           GAAGACACATGAAATTGCAGACATGAAGAATGGGGGCAAAAGAGACAATATTTGAACTTT
                      ____________________________________________________________
consensus             GAAGACACATGAAATTGCAGACATGAAGAATGGGGGCAAAAGAGACAATATTTGAACTTT