Contig 006002:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030C21Sequence316006002 (2)
JMSF019B18Sequence212021033735006002 (2)ref|XP_006351054.1|57.4PREDICTED: uncharacterized protein LOC102581981 [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF019B18+                 TCCACCNTCCATCCTTTGATCGCAATATGTGCGACGCTTGCCTCTTTCCAGCA
                      ____________________________________________________________
consensus                    TCCACCNTCCATCCTTTGATCGCAATATGTGCGACGCTTGCCTCTTTCCAGCA
 
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rJMSF019B18+          AACACCCCTTTCTACCGCTGCAGCATATGCGATTATGACCTGCATGTAGATTGCGCTCTT
                      ____________________________________________________________
consensus             AACACCCCTTTCTACCGCTGCAGCATATGCGATTATGACCTGCATGTAGATTGCGCTCTT
 
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rJMSF019B18+          ATAACCGAATGGCAGAGCCAGCATCTATACTTCTCGTTCCCAGCGGGGGCTAGTGTCTGG
                      ____________________________________________________________
consensus             ATAACCGAATGGCAGAGCCAGCATCTATACTTCTCGTTCCCAGCGGGGGCTAGTGTCTGG
 
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rJMSF019B18+          TGCAGTAAGTGCAATGGTGGAATTTCTAGGAGAGGCGGCTGGGTGTGGTATGACAAGGAG
                      ____________________________________________________________
consensus             TGCAGTAAGTGCAATGGTGGAATTTCTAGGAGAGGCGGCTGGGTGTGGTATGACAAGGAG
 
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rJMSF019B18+          ACAGGTTTCACTGCTCATTTCAACTGTGGACGACCAGTAATACGTAAAATTCAACCTTAT
                      ____________________________________________________________
consensus             ACAGGTTTCACTGCTCATTTCAACTGTGGACGACCAGTAATACGTAAAATTCAACCTTAT
 
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rJMSF019B18+          TTTCTAAGGCCCTTGATGCGTAATGATAATTTTAATAATTTGATACAACCCCACAACTAA
                      ____________________________________________________________
consensus             TTTCTAAGGCCCTTGATGCGTAATGATAATTTTAATAATTTGATACAACCCCACAACTAA
 
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rJMSF019B18+          ACAACCCAAGACCCGAACGAGTTGCGAAGGTCAACTCGCATTCATAAGGAAAGGAAGGAT
                      ____________________________________________________________
consensus             ACAACCCAAGACCCGAACGAGTTGCGAAGGTCAACTCGCATTCATAAGGAAAGGAAGGAT
 
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rJMSF019B18+          GAATCTTTCATTTATGGCTGATTGTACTCACAAGGAAAGGCTTGCGCTATTATTTTGGTT
                      ____________________________________________________________
consensus             GAATCTTTCATTTATGGCTGATTGTACTCACAAGGAAAGGCTTGCGCTATTATTTTGGTT
 
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rJMSF019B18+          TAGAGGATCATGCCTCAATATTTCTTTTTATTTACTTCCATATATAGTTTTGGTTCAATA
                      ____________________________________________________________
consensus             TAGAGGATCATGCCTCAATATTTCTTTTTATTTACTTCCATATATAGTTTTGGTTCAATA
 
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rJMSF019B18+          ATATAGTCTGCATGACAACCCAATAGGGTAGCTCAACTAGCAAATGAGCTCTTTTTGTGG
JMFF030C21+                                                                TTTGTGG
                      ____________________________________________________________
consensus             ATATAGTCTGCATGACAACCCAATAGGGTAGCTCAACTAGCAAATGAGCTCTTTTTGTGG
 
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rJMSF019B18+          GGAAGAATTCTGGGATAACTCGGGTTTGATTTCCACAAGTGACGATTCCCTTTGGGCCAG
JMFF030C21+           GGGAGAATTTCGGGATAACTCGGGTTCAATTCCCACAAGTGACGATTCCCTTTGGGCCAG
                      ____________________________________________________________
consensus             GGGAGAATTTTGGGATAACTCGGGTTTGATTTCCACAAGTGACGATTCCCTTTGGGCCAG
 
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rJMSF019B18+          CTTTTGTGCCTCCCGGAGCGAACCGGGTGGACCTGGAC                      
JMFF030C21+           CTTCTGTGCTTCTCGGAGCGAACCGGGTGGACCTGGACCGTTAAACGGACAGAGAAAGAC
                      ____________________________________________________________
consensus             CTTTTGTGCTTCTCGGAGCGAACCGGGTGGACCTGGACCGTTAAACGGACAGAGAAAGAC
 
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JMFF030C21+           CCGGACCACATTGTGGTTTACACCAAAAGAAAAAATGAATACGAAGTAAACCTGTCCAAA
                      ____________________________________________________________
consensus             CCGGACCACATTGTGGTTTACACCAAAAGAAAAAATGAATACGAAGTAAACCTGTCCAAA
 
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JMFF030C21+           TGGTCCAGAAGAGCCATGTTTTTCTGAGCCTTCATATGGCTTGTGCAGTTTTTCGCTGCC
                      ____________________________________________________________
consensus             TGGTCCAGAAGAGCCATGTTTTTCTGAGCCTTCATATGGCTTGTGCAGTTTTTCGCTGCC
 
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JMFF030C21+           TTTCATCGTGGGATCAGTTCCTTGCAGAGAATCTTGCTTTCCTTGCAAGGAGATCCCCGT
                      ____________________________________________________________
consensus             TTTCATCGTGGGATCAGTTCCTTGCAGAGAATCTTGCTTTCCTTGCAAGGAGATCCCCGT