| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF027O17 | Sequence | 538 | 005992 (6) | ref|XP_010062167.1| | 4e-09 | PREDICTED: putative transcription elongation factor SPT5 homolog 1 [Eucalyptus | 699 | 016979 | ref|XP_011101790.1| | 3e-64 | PREDICTED: putative transcription elongation factor SPT5 homolog 1 [Sesamum ind |
| JMFS026C11 | Sequence | 594 | 005992 (6) | gb|KDO83589.1| | 6e-33 | hypothetical protein CISIN_1g001506mg [Citrus sinensis] | |||||
| JMFS074D05 | Sequence | 642 | 005992 (6) | gb|KDO83589.1| | 1e-43 | hypothetical protein CISIN_1g001506mg [Citrus sinensis] | |||||
| JMFS104B04 | Sequence | 620 | 005992 (6) | ref|XP_010062167.1| | 7e-24 | PREDICTED: putative transcription elongation factor SPT5 homolog 1 [Eucalyptus | |||||
| JMFS136C07 | Sequence | 369 | 005992 (6) | ref|XP_010062167.1| | 1e-09 | PREDICTED: putative transcription elongation factor SPT5 homolog 1 [Eucalyptus | |||||
| JMFS160F09 | Sequence | 543 | 005992 (6) | ref|XP_010062167.1| | 4e-20 | PREDICTED: putative transcription elongation factor SPT5 homolog 1 [Eucalyptus | |||||
This contig is upended
. : . : . : . : . : . :
JMFS026C11+ CTTCGGATCTCTG
JMFS074D05+ AAAGCAACCTCCCTCTCACGACCAATCGCACATTTCACCATCCATAACTTCGGATCTCTG
____________________________________________________________
consensus AAAGCAACCTCCCTCTCACGACCAATCGCACATTTCACCATCCATAACTTCGGATCTCTG
. : . : . : . : . : . :
JMFS026C11+ ACAGATGGTAAAAGTGCTTGCTGCTCTACATCAGTAGCTTCCTCATCATACTCCACATGA
JMFS074D05+ ACAGATGGTAAAAGTGCTTGCTGCTCTACATCAGTAGCTTCCTCATCATACTCCACATGA
JMFS160F09+ ACTCCACATGA
JMFS104B04+ ACATCAGTAGCTTCCTCATCATACTCCACATGA
____________________________________________________________
consensus ACAGATGGTAAAAGTGCTTGCTGCTCTACATCAGTAGCTTCCTCATCATACTCCACATGA
. : . : . : . : . : . :
JMFS026C11+ CTTGACCTTGCATATCTAGCCTGGATGCTTCTCTCAAGTGCCTCAAAGTCTTCCTCTTGG
JMFS136C07+ CTTGG
JMFS074D05+ CTTGACCTTGCATATCTAGCCTGGATGCTTCTCTCAAGTGCCTCAAAGTCTTCCTCTTGG
JMFS160F09+ CTTGACCTTGCATATCTAGCCTGGATGCTTCTCTCAAGTGCCTCAAAGTCTTCCTCTTGG
JMFS104B04+ CTTGACCTTGCATATCTAGCCTGGATGCTTCTCTCAAGTGCCTCANAGTCTTCCTCTTGG
____________________________________________________________
consensus CTTGACCTTGCATATCTAGCCTGGATGCTTCTCTCAAGTGCCTCAAAGTCTTCCTCTTGG
. : . : . : . : . : . :
JMFS026C11+ TCCTCACGTGAGAGAATTGGGCGGCGATGAATCTGTCTTGAATCATAATCATCAGGTATA
JMFS136C07+ TCCTCACGTAAGAGAATTGGGCGGCGATAAATCTGTCTTGAATCATAATCATCAGGTATA
JMFS074D05+ TCCTCACGTGAGAGAATTGGGCGGCGATGAATCTGTCTTGAATCATAATCATCAGGTATA
JMFS160F09+ TCCTCACGTGAGAGAATTGGGCGGCGATGAATCTGTCTTGAATCATAATCATCAGGTATA
JMFS104B04+ TCCTCACGTGAGAGAATTGGGCGGCGATGAATCTGTCTTGAATCATAATCATCAGGTATA
JMFF027O17+ CTCACGTGAGAGAATTGGGCGGCGATGAATCTGTCTTGAATCATAATCATCAGGTATA
____________________________________________________________
consensus TCCTCACGTGAGAGAATTGGGCGGCGATGAATCTGTCTTGAATCATAATCATCAGGTATA
. : . : . : . : . : . :
JMFS026C11+ TCAGCTCCATTATCCACGATGAAGTCGTCTTCGCCGTCTTCTTCTTCTTCATCGTCATCG
JMFS136C07+ TCAGCTCCATTATCCACGATGAAGTCGTCTTCGCCGTCTTCTTCTTCTTCATCGTCATCG
JMFS074D05+ TCAGCTCCATTATCCACGATGAAGTCGTCTTCGCCGTCTTCTTCTTCTTCATCGTCATCG
JMFS160F09+ TCAGCTCCATTATCCACGATGAAGTCGTCTTCGCCGTCTTCTTCTTCTTCATCGTCATCG
JMFS104B04+ TCAGCTCCATTATCCACGATGAAGTCGTCTTCGCCGTCTTCTTCTTCTTCATCGTCATCG
JMFF027O17+ TCAGCTCCATTATCCACGATGAAGTCGTCTTCGCCGTCTTCTTCTTCTTCATCGTCATCG
____________________________________________________________
consensus TCAGCTCCATTATCCACGATGAAGTCGTCTTCGCCGTCTTCTTCTTCTTCATCGTCATCG
. : . : . : . : . : . :
JMFS026C11+ CTATCAACCGCTGCCTCGAGATCAAAAAAATGAGACCCCGACCTCTTCTTGTTACGTTTA
JMFS136C07+ CTATCAACCGCTGCCTCGAGATCAAAAAAATGAGACCCCGACCTCTTCTTGTTACGTTTA
JMFS074D05+ CTATCAACCGCTGCCTCGAGATCAAAAAAATGAGACCCCGACCTCTTCTTGTTACGTTTA
JMFS160F09+ CTATCAACCGCTGCCTCGAGATCAAAAAAATGAGACCCCGACCTCTTCTTGTTACGTTTA
JMFS104B04+ CTATCAACCGCTGCCTCGAGATCAAAAAAATGAGACCCCGACCTCTTCTTGTTACGTTTA
JMFF027O17+ CTATCAACCGCTGCCTCGAGATCAAAAAAATGAGACCCCGACCTCTTCTTGTTACGTTTA
____________________________________________________________
consensus CTATCAACCGCTGCCTCGAGATCAAAAAAATGAGACCCCGACCTCTTCTTGTTACGTTTA
. : . : . : . : . : . :
JMFS026C11+ CGACCTCCATAATCGTCGTCGTCATCTTCTTCATCTTCATCATCTTCCTCCGCCGCATCA
JMFS136C07+ CGACCTCCATAATCGTCGTCGTCATCTTCTTCATCTTCATCATCTTCCTCCGCCGCATCA
JMFS074D05+ CGACCTCCATAATCGTCGTCGTCATCTTCTTCATCTTCATCATCTTCCTCCGCCGCATCA
JMFS160F09+ CGACCTCCATAATCGTCGTCGTCATCTTCTTCATCTTCATCATCTTCCTCCGCCGCATCA
JMFS104B04+ CGACCTCCATAATCGTCGTCGTCATCTTCTTCATCTTCATCATCTTCCTCCGCCGCATCA
JMFF027O17+ CGACCTCCATAATCGTCGTCGTCATCTTCTTCATCTTCATCATCTTCCTCCGCCGCATCA
____________________________________________________________
consensus CGACCTCCATAATCGTCGTCGTCATCTTCTTCATCTTCATCATCTTCCTCCGCCGCATCA
. : . : . : . : . : . :
JMFS026C11+ TCGATGAAATCCGATCTCGAGCGCTTCCTCCCGGCCTTTCCGCCGCCGTCATACTCCTCT
JMFS136C07+ TCGATGAAATCCGATCTCGAGCGCTTCCTCCCGGCCTTTCCGCCGCCGTCATACTCCTCT
JMFS074D05+ TCGATGAAATCCGATCTCGAGCGCTTCCTCCCGGCCTTTCCGCCGCCGTCATACTCCTCT
JMFS160F09+ TCGATGAAATCCGATCTCGAGCGCTTCCTCCCGGCCTTTCCGCCGCCGTCATACTCCTCT
JMFS104B04+ TCGATGAAATCCGATCTCGAGCGCTTCCTCCCGGCCTTTCCGCCGCCGTCATACTCCTCT
JMFF027O17+ TCGATGAAATCCGATCTCGAGCGCTTCCTCCCGGCCTTTCCGCCGCCGTCATACTCCTCT
____________________________________________________________
consensus TCGATGAAATCCGATCTCGAGCGCTTCCTCCCGGCCTTTCCGCCGCCGTCATACTCCTCT
. : . : . : . : . : . :
JMFS026C11+ TCTTCCTCTTCTTCCTCATCATCCATCACATCCTCGTAATCGTCCTCCGGGTCCAGCTCC
JMFS136C07+ TCTTCCTCTTCTTCCTCATCATCCATCACATCCTCGTAATCGTCCTCCGGGTCCAGCTCC
JMFS074D05+ TCTTCCTCTTCTTCCTCATCATCCATCACATCCTCGTAATCGTCCTCCGGGTCCAGCTCC
JMFS160F09+ TCTTCCTCTTCTTCCTCATCATCCATCACATCCTCGTAATCGTCCTCCGGGTCCAGCTCC
JMFS104B04+ TCTTCCTCTTCTTCCTCATCATCCATCACATCCTCGTAATCGTCCTCCGGGTCCAGCTCC
JMFF027O17+ TCTTCCTCTTCTTCCTCATCATCCATCACATCCTCGTAATCGTCCTCCGGGTCCAGCTCC
____________________________________________________________
consensus TCTTCCTCTTCTTCCTCATCATCCATCACATCCTCGTAATCGTCCTCCGGGTCCAGCTCC
. : . : . : . : . : . :
JMFS026C11+ TCATCATCCTCCTCGTCACGCCTCCTCGCCATGGTTAATTTGCTTCAAGTTCCGAAACTA
JMFS136C07+ TCAT
JMFS074D05+ TCATCATCCTCCTCGTCACGCCTCCTCGCCATGGTTAATTTGCTTCAAGTTCCGAAACTA
JMFS160F09+ TCATCATCCTCCTCGTCACGCCTCCTCGCCATGGTTAATTTGCTTCAAGTTCCGAAACTA
JMFS104B04+ TCATCATCCTCCTCGTCACGCCTCCTCGCCATGGTTAATTTGCTTCAAGTTCCGAAACTA
JMFF027O17+ TCATCATCCTCCTCGTCACGCCTCCTCGCCATGGTTAATTTGCTTCAAGTTCCGAAACTA
____________________________________________________________
consensus TCATCATCCTCCTCGTCACGCCTCCTCGCCATGGTTAATTTGCTTCAAGTTCCGAAACTA
. : . : . : . : . : . :
JMFS026C11+ TCCCCAAATTCAGAGCACACACTGAGTTTTCCGAAATTCAG
JMFS074D05+ TCCCCAAATTCAGAGCACACACTGAGTTTTCCGAAATTCAGA
JMFS160F09+ TCCCCAAATTCAGAGCACACACTGAGTTTTCCGAAATTCAGAGAAGAGTGAA
JMFS104B04+ TCCCCAAATTCAGAGCACACACTGAGTTTTCCGAAATTCAGAGAAGAGTGAACTCGATTG
JMFF027O17+ TCCCCAAATTCAGAGCACACACTGAGTTTTCCGAAATTCAGAGAAGAGTGAACTCGATTG
____________________________________________________________
consensus TCCCCAAATTCAGAGCACACACTGAGTTTTCCGAAATTCAGAGAAGAGTGAACTCGATTG
. : . : . : . : . : . :
JMFS104B04+ TGTTCGAAAATTTTATACACTTTTGCGTTTGCAAATAGAAACCTAAC
JMFF027O17+ TGTTCGAAAATTTTATACACTTTTGCGTTTGCAAATAGAAACCTAACTGCTTGAGGCCTT
____________________________________________________________
consensus TGTTCGAAAATTTTATACACTTTTGCGTTTGCAAATAGAAACCTAACTGCTTGAGGCCTT