Contig 005989:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016D18Sequence359005989 (4)ref|XP_009623871.1|2e-28PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like 628006826 (4)ref|XP_009351030.1|3e-30PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like
JMFF020E04Sequence408005989 (4)ref|XP_009623871.1|3e-28PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like 639006826 (4)ref|XP_008386160.1|2e-43PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like
JMFF023A01Sequence337005989 (4)ref|XP_009623871.1|5e-12PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like 507006826 (4)gb|KDO74061.1|3e-16hypothetical protein CISIN_1g0225552mg, partial [Citrus sinensis]
JMFF027I17Sequence530005989 (4)ref|XP_004248267.1|5e-60PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Sola664006826 (4)ref|XP_009628354.1|1e-50PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like,

Alignment

This contig is upended


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JMFF027I17+ AACAACAATGTCATACTTCTTCTCGAGCTTTTGAAGAGCCTCATTACATC
                      ____________________________________________________________
consensus AACAACAATGTCATACTTCTTCTCGAGCTTTTGAAGAGCCTCATTACATC
 
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JMFF027I17+ GCTCAGTTCCATTTCTACATGATTCAGAAGTCATAATGACTTCAGCACCAAATCCCCTAC
                      ____________________________________________________________
consensus GCTCAGTTCCATTTCTACATGATTCAGAAGTCATAATGACTTCAGCACCAAATCCCCTAC
 
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JMFF020E04+ TCTTTTCATCATCCGTCGCCACAACAACTTGATCCAATGCCCTAGNTA
JMFF016D18+ ACATTCAGCAATCTTTTCATCATCCGTCGCCACAACAACTTGATCCAATGCCCTAGCTA
JMFF027I17+ AACATTCAGCAATCTTTTCATCATCCGTCGCCACAACAACTTGATCCAATGCCCTAGCTA
                      ____________________________________________________________
consensus AACATTCAGCAATCTTTTCATCATCCGTCGCCACAACAACTTGATCCAATGCCCTAGCTA
 
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JMFF020E04+ ATTTCGCCCTTTCCCATGTTCTCTGGATCATGGGCTTGCCGAGGATATCTACGAGCGGTT
JMFF016D18+ ATTTCGCCCTTTCCCATGTTCTNTGGATCANGGGCTNGCCGAGGATATNTACGAGCGGTT
JMFF023A01+ TGGATCATGGGCTTGCCGAGGATATCTACGAGCGGTT
JMFF027I17+ ATTTCGCCCTTTCCCATGTTCTCTGGATCATGGGCTTGCCGAGGATATCTACGAGCGGTT
                      ____________________________________________________________
consensus ATTTCGCCCTTTCCCATGTTCTCTGGATCATGGGCTTGCCGAGGATATCTACGAGCGGTT
 
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JMFF020E04+ TACCAGGGAACCGAGTGGAAGCGAAACGGGCGGGTATGATCCCGATGACCCGACTCCGGA
JMFF016D18+ TACCAGGGAACCGAGTGGAAGCGAAACGGGCGGGTATGATCCCGATGACCCGACTCCGGA
JMFF023A01+ TACCAGGGAACCGAGTGGAAGGGAAACGGGCGGGTATGATCCCGATGACCCGACTCCGGA
JMFF027I17+ TACCAGGGAACCGAGTGGAAGCGAAACGGGCGGGTATGATCCCGATGACCCGACTCCGGA
                      ____________________________________________________________
consensus TACCAGGGAACCGAGTGGAAGCGAAACGGGCGGGTATGATCCCGATGACCCGACTCCGGA
 
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JMFF020E04+ ACTTCCCAGATCTAAGAAAGTATCTGTGAGCACCGAAAGCAACGGCCACTGCGGCTCCGG
JMFF016D18+ ACTTCCCAGATNTAAGAAAGTATCTGTGAGCACCGAAAGCAACGGCCACTGCGGCTCCGG
JMFF023A01+ ACTTCCCAGATCTAAGAAAGTATCTGTGAGCACCGAAAGCAACGGCCACTGCGGCTCCGG
JMFF027I17+ ACTTCCCAGATCTAAGAAAGTATCTGTGAGCACCGAAAGCAACGGCCACTGCGGCTCCGG
                      ____________________________________________________________
consensus ACTTCCCAGATCTAAGAAAGTATCTGTGAGCACCGAAAGCAACGGCCACTGCGGCTCCGG
 
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JMFF020E04+ CCACCAGAGCGTGAACGAGCCACGATTTCGTTGAGCTCGACGACGTGGACGACGGCGGCG
JMFF016D18+ CCACCAGAGCGTGAACGAGCCNCGATTTCGTTGAGCTCGACGACGTGGACGACGGCGGCG
JMFF023A01+ CCACCAGAGCGTGAACGAGCCACGATTTCGTTGAGCTCGACGACGTGGACGACGGCGGCG
JMFF027I17+ CCACCAGAGCGTGAACGAGCCACGATTTCGTTGAGCTCGACGACGTGGACGACGGCGGCG
                      ____________________________________________________________
consensus CCACCAGAGCGTGAACGAGCCACGATTTCGTTGAGCTCGACGACGTGGACGACGGCGGCG
 
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JMFF020E04+ ACGAGTTGCACATCGGCATTGCGCTTTTCCAGCTTCAGGGAACACGTGGGAAAGATTTAT
JMFF016D18+ ACGAGTTGCACATCGGCATTGCGCTTTTCCAGCTTCAGGGAACACGTGGGAAAGATTTAT
JMFF023A01+ ACGAGTTGCACATCGGCATTGCGCTTTTCCAGCTTCAGGGAACACGTGGGAAAGATTTAT
JMFF027I17+ ACGAGTTGCACATCGGCATTGCGCTTTTCCAGCTTCAGGGAACACGTGGGAAAGATTTAT
                      ____________________________________________________________
consensus ACGAGTTGCACATCGGCATTGCGCTTTTCCAGCTTCAGGGAACACGTGGGAAAGATTTAT
 
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JMFF020E04+ AAGCCACTCCACCTGGATTTGCGGAGTATGATTAGCTCCAGAAACTGGCAGCCGATGACC
JMFF023A01+ AAGCCACTCCACCTGGATTTGCGGAGTATGATTAGCTCCAGAAACTGGCAGCCGATGACC
JMFF027I17+ AAGCCACTCCACCTGGATTTGCGGAGTATGATTAGCTCCAGAAACTGGCAGCCGATGACC
                      ____________________________________________________________
consensus AAGCCACTCCACCTGGATTTGCGGAGTATGATTAGCTCCAGAAACTGGCAGCCGATGACC