Contig 005987:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF043I03+                                  CGGGAGAAGATCGTTAGGAGGAGGAGTAGTCTGGTAC
                      ____________________________________________________________
consensus                                    CGGGAGAAGATCGTTAGGAGGAGGAGTAGTCTGGTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF043I03+           AAGGTTTGCTGCTGTTGCTGGTTAACCGAAGAAGGAGAGTTGGTGAAGAATGGTATGCCG
                      ____________________________________________________________
consensus             AAGGTTTGCTGCTGTTGCTGGTTAACCGAAGAAGGAGAGTTGGTGAAGAATGGTATGCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF043I03+           CGGTGGTGGTCGGAGGAATTATCGGAAGATGAGGAAGAGGATGAGGTTCCGATCATGATA
                      ____________________________________________________________
consensus             CGGTGGTGGTCGGAGGAATTATCGGAAGATGAGGAAGAGGATGAGGTTCCGATCATGATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF043I03+           GAGTTGTTGCCGAGGAAAGTGACCGCCGGTGGAGGTGGCGGAGGAGGAGGAGAAGGGTTT
JMFF027F13+                                                                     TT
                      ____________________________________________________________
consensus             GAGTTGTTGCCGAGGAAAGTGACCGCCGGTGGAGGTGGCGGAGGAGGAGGAGAAGGGTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF043I03+           TGCTGTGGCTCCACTACTACTGCAGCCGCCATGGCGTTCTGGATTTGGAGCTGCCGCTGC
JMFF027F13+           TGCTGTGGCTCCACTACTACTGCAGCCGCCATGGCGTTNTGGATTTGGAGCTGCCGCTGC
                      ____________________________________________________________
consensus             TGCTGTGGCTCCACTACTACTGCAGCCGCCATGGCGTTCTGGATTTGGAGCTGCCGCTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF043I03+           TTGTTTTTGCTTCGGGATTTCCTATTCTGGAACCAGTAAAAGACGTTGGCATCACCTACT
JMFF027F13+           TTGTTTTTGCTTCGGGATTTCCTATTCTGGAACCAGTAAAAGACGTTGGCATCACCTACT
                      ____________________________________________________________
consensus             TTGTTTTTGCTTCGGGATTTCCTATTCTGGAACCAGTAAAAGACGTTGGCATCACCTACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF043I03+           TCTCCATACTCTTCAAGCCGGATTCTTATCCGTCTTATCTCCTCCCGGGACGGATTCACC
JMFF027F13+           TCTCCATACTCTTCAAGCCGGATTCTTATCCGTCTTATCTCCTCCCGGGACGGATTCACC
                      ____________________________________________________________
consensus             TCTCCATACTCTTCAAGCCGGATTCTTATCCGTCTTATCTCCTCCCGGGACGGATTCACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF043I03+           ACCCCAGAATTAAAAAGAGATTCCAGGATACGTATCTGTTCTGGTTTCGGATTCCACCTC
JMFF027F13+           ACCCCAGAATTAAAAAGAGATTCCAGGATACGTATCTGTTCTGGTTTCGGATTCCACCTC
                      ____________________________________________________________
consensus             ACCCCAGAATTAAAAAGAGATTCCAGGATACGTATCTGTTCTGGTTTCGGATTCCACCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF043I03+           GGCTTCGGCTCCGGTGTCCTCTCCTCAGCCCCACCGCCGGAGAGGGAGGAGCTGGAGTCA
JMFF027F13+           GGCTTCGGCTCCGGTGTCCTCTCCTCAGCCCCACCGCCGGAGAGGGAGGAGCTGGAGTCA
                      ____________________________________________________________
consensus             GGCTTCGGCTCCGGTGTCCTCTCCTCAGCCCCACCGCCGGAGAGGGAGGAGCTGGAGTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF043I03+           TGGTGGCGTTGATTAGAGGCAGAAGGCTTGGACCTGAACAGGCTGGGCCAGTGCTTGTTC
JMFF027F13+           TGGTGGCGTTGATTAGAGGCAGAAGGCTTGGACCTGAACAGGCTGGGCCAGTGCTTGTTC
                      ____________________________________________________________
consensus             TGGTGGCGTTGATTAGAGGCAGAAGGCTTGGACCTGAACAGGCTGGGCCAGTGCTTGTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF043I03+           GACGACGAAGACATGATATACCGGTAACGGATAAACAAGAAACGTCCTGCGAATTGAA  
JMFF027F13+           GACGACGAAGACATGATATACCGGTAACGGATAAACAAGAAACGTCCTGCGAATTGAAAT
                      ____________________________________________________________
consensus             GACGACGAAGACATGATATACCGGTAACGGATAAACAAGAAACGTCCTGCGAATTGAAAT