Contig 005986:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023N05Sequence390005986 (3)emb|CDP08180.1|4e-17unnamed protein product [Coffea canephora]
JMFF027A12Sequence452005986 (3)ref|XP_006364726.1|6e-27PREDICTED: caffeoylshikimate esterase-like [Solanum tuberosum]
JMFS030H07Sequence454005986 (3)ref|XP_006364726.1|6e-27PREDICTED: caffeoylshikimate esterase-like [Solanum tuberosum]

Alignment

This contig is upended


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JMFS030H07+             AACGGAGGCTTCCCTCTCCATCCCCAATCGCGGGCACCATCTCCAAGGACTCGGCGAG
JMFF027A12+                                       ATCGCGGGCACCATCTCCAAGGACTCGGCGAG
                      ____________________________________________________________
consensus               AACGGAGGCTTCCCTCTCCATCCCCAATCGCGGGCACCATCTCCAAGGACTCGGCGAG
 
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JMFS030H07+           GGCTCTCCGGCGGAGAGTATCCTCCTCGTCCCTCTGCAGCGCGAATTTCCGGCGTTTCCC
JMFF023N05+                                         CCTCTGCAGCGCGAATTTCCGGCGTTTCCC
JMFF027A12+           GGCTCTCCGGCGGAGAGTATCCTCCTCGTCCCTCTGCAGCGCGAATTTCCGGCGTTTCCC
                      ____________________________________________________________
consensus             GGCTCTCCGGCGGAGAGTATCCTCCTCGTCCCTCTGCAGCGCGAATTTCCGGCGTTTCCC
 
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JMFS030H07+           GGACGCGGCAGCGGCGGCCGCCGCGGAAGGGGAGGACGGCGGAGATGGGGCGGAGAGGCG
JMFF023N05+           GGACGCGGCAGCGGCGGCCGCCGCGGAAGGGGAGGACGGCGGAGATGGGGCGGAGAGGCG
JMFF027A12+           GGACGCGGCAGCGGCGGCCGCCGCGGAAGGGGAGGACGGCGGAGATGGGGCGGAGAGGCG
                      ____________________________________________________________
consensus             GGACGCGGCAGCGGCGGCCGCCGCGGAAGGGGAGGACGGCGGAGATGGGGCGGAGAGGCG
 
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JMFS030H07+           GTAGCGGAACAGGAGGAGGACGATCCATAGGAACATGGAGCGGACAAAGATGATCAAGCG
JMFF023N05+           GTAGCGGAACAGGAGGAGGACGATCCATAGGAACATGGAGCGGACAAAGATGATCAAGCG
JMFF027A12+           GTAGCGGAACAGGAGGAGGACGATCCATAGGAACATGGAGCGGACAAAGATGATCAAGCG
                      ____________________________________________________________
consensus             GTAGCGGAACAGGAGGAGGACGATCCATAGGAACATGGAGCGGACAAAGATGATCAAGCG
 
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JMFS030H07+           GCGAAAGGCGTCGTGGGAGAAAACGGAGCGCCGGAGGTTCTTGAAGACCGGAATAATCCG
JMFF023N05+           GCGAAAGGCGTCGTGGGAGAAAACGGAGCGCCGGAGGTTCTTGAAGACCGGAATAATCCG
JMFF027A12+           GCGAAAGGCGTCGTGGGAGAAAACGGAGCGCCGGAGGTTCTTGAAGACCGGAATAATCCG
                      ____________________________________________________________
consensus             GCGAAAGGCGTCGTGGGAGAAAACGGAGCGCCGGAGGTTCTTGAAGACCGGAATAATCCG
 
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JMFS030H07+           GCCGCTGGCGCCGGATGTTAGCTCCTCCACCTGCACCCCTTCCATTGCAGACGGAGAAGG
JMFF023N05+           GCCGCTGGCGCCGGATGTTAGCTCCTCCACCTGCACCCCTTCCATTGCAGACGGAGAAGG
JMFF027A12+           GCCGCTGGCGCCGGATGTTAGCTCCTCCACCTGCACCCCTTCCATTGCAGACGGAGAAGG
                      ____________________________________________________________
consensus             GCCGCTGGCGCCGGATGTTAGCTCCTCCACCTGCACCCCTTCCATTGCAGACGGAGAAGG
 
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JMFS030H07+           GGAGAAAAGAGAAAAACTCCCTTCCTTTCCTTGCGTGTGTATACGTGAACAGATAAACGA
JMFF023N05+           GGAGAAAAGAGAAAAACTCCCTTCCTTTCCTTGCGTGTGTATACGTGAACAGATAAACGA
JMFF027A12+           GGAGAAAAGAGAAAAACTCCCTTCCTTTCCTTGCGTGTGTATACGTGAACAGATAAACGA
                      ____________________________________________________________
consensus             GGAGAAAAGAGAAAAACTCCCTTCCTTTCCTTGCGTGTGTATACGTGAACAGATAAACGA
 
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JMFS030H07+           CACAGAAATATAGAGACAAAAATGTAGAGAGAGAAA                        
JMFF023N05+           CACAGAAATATAGAGACAAAAATGTAGAGAGAGAAAGAGGGAGAAAGAGAGGAGGTGGAG
JMFF027A12+           CACAGAAATATAGAGACAAAAATGTAGAGAGAGAAAGAGGGAGAAAGAGAGGAGGTGGAG
                      ____________________________________________________________
consensus             CACAGAAATATAGAGACAAAAATGTAGAGAGAGAAAGAGGGAGAAAGAGAGGAGGTGGAG