Contig 005980:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF026A09+                                                                TAACACT
                      ____________________________________________________________
consensus                                                                  TAACACT
 
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JMFF026A09+           CATCATCAGCAACGCAATTAAGCAGATGACGGAACAGTCTATCCTTCAAATCCTTAGCCT
                      ____________________________________________________________
consensus             CATCATCAGCAACGCAATTAAGCAGATGACGGAACAGTCTATCCTTCAAATCCTTAGCCT
 
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JMFF026A09+           TTCAGAACCGATGTTTCATCTCTACAAAAGGTACTCTAGATGATCGTCAAATTTTTTCCT
                      ____________________________________________________________
consensus             TTCAGAACCGATGTTTCATCTCTACAAAAGGTACTCTAGATGATCGTCAAATTTTTTCCT
 
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JMFF026A09+           GTTCATACATCTTTTGAGCCACAAACCCCATTACAGAAACCCAGGGAAAATGCACCCAAT
                      ____________________________________________________________
consensus             GTTCATACATCTTTTGAGCCACAAACCCCATTACAGAAACCCAGGGAAAATGCACCCAAT
 
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JMFF026A09+           CAGAAAATACAAAATGGAAAGGCAATAAAATTCTTGGGAATACAGAGATGGGGAAGGAGG
                      ____________________________________________________________
consensus             CAGAAAATACAAAATGGAAAGGCAATAAAATTCTTGGGAATACAGAGATGGGGAAGGAGG
 
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JMSF016A02+                    ATGTAAGCATTAATACAGAGGGGAGATGAGCAGTGGCGCCCAGGCTGCCAC
JMFF026A09+           TCTGTGTACATGTAAGCATTAATACAGAGGGGAGATGAGCAGTGGCGCCCAGGCTGCCAC
                      ____________________________________________________________
consensus             TCTGTGTACATGTAAGCATTAATACAGAGGGGAGATGAGCAGTGGCGCCCAGGCTGCCAC
 
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JMSF016A02+           GTGGACTGTTGCATGCCAGTGACCGCTCATAGAAGAAGACCTGCACTCTGCTATCTATCT
JMFF026A09+           GTGGACTGTTGCATGCCAGTGACCGCTCATAGAAGAAGACCTGCACTCTGCTATCTATCT
                      ____________________________________________________________
consensus             GTGGACTGTTGCATGCCAGTGACCGCTCATAGAAGAAGACCTGCACTCTGCTATCTATCT
 
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JMSF016A02+           ATCTATTTCCTGTATCCATCACTATCAAACCCACTCCCATAACTGCATGAGTTGTGATCC
JMFF026A09+           ATCTATTTCCTGTATCCATCACTATCAAACCCACTCCCATAACTGCATGAGTTGTGATCC
                      ____________________________________________________________
consensus             ATCTATTTCCTGTATCCATCACTATCAAACCCACTCCCATAACTGCATGAGTTGTGATCC
 
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JMSF016A02+           AAGTGGCCAAGCTGGGTTTCTGGAATTCTGAGGAAAAAGATAAAGGATAAATAGCTTAGG
JMFF026A09+           AAGTGGCCAAGCTGGGTTTCTGGAATTCTGAGGAAAAAGATAAAGGATAAATAGCTTAGG
                      ____________________________________________________________
consensus             AAGTGGCCAAGCTGGGTTTCTGGAATTCTGAGGAAAAAGATAAAGGATAAATAGCTTAGG
 
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JMSF016A02+           GAAACCATCCATTCCCTTCTAGACT                                   
JMFF026A09+           GAAACCATCCATTCCCTTCTAGACTGGGAATCTAAGCAATTTCCCTATCACTTTATATAC
                      ____________________________________________________________
consensus             GAAACCATCCATTCCCTTCTAGACTGGGAATCTAAGCAATTTCCCTATCACTTTATATAC