Contig 005979:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005M05Sequence549005979 (7)gb|AAD32141.1|AF123503_12e-81Nt-gh3 deduced protein [Nicotiana tabacum]583004097 (9)gb|ABN05326.1|4e-74GH3 protein [Rhodiola sachalinensis]
JMFF018M18Sequence571005979 (7)gb|AAD32141.1|AF123503_13e-87Nt-gh3 deduced protein [Nicotiana tabacum]688004097 (9)gb|ABN05326.1|3e-88GH3 protein [Rhodiola sachalinensis]
JMFF025O09Sequence620005979 (7)emb|CDO97242.1|9e-98unnamed protein product [Coffea canephora]730004097 (9)gb|ABN05326.1|3e-83GH3 protein [Rhodiola sachalinensis]
JMFF042C19Sequence650005979 (7)emb|CDO97242.1|7e-106unnamed protein product [Coffea canephora]620004097 (9)gb|ABN05326.1|2e-65GH3 protein [Rhodiola sachalinensis]
JMFF043L14Sequence637005979 (7)gb|AAD32141.1|AF123503_13e-103Nt-gh3 deduced protein [Nicotiana tabacum]395004097 (9)gb|EPS68048.1|2e-14hypothetical protein M569_06726, partial [Genlisea aurea]
JMFS139H01Sequence641005979 (7)emb|CDO97242.1|1e-106unnamed protein product [Coffea canephora]
JMFS151D07Sequence618005979 (7)gb|AAD32141.1|AF123503_12e-103Nt-gh3 deduced protein [Nicotiana tabacum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS151D07+                             CAAGCCCTCCCGGCGTCTTCGTCTCAGACTTCACAAACATGA
JMFF043L14+                             CAAGCCCTCCCGGCGTCTTCGTCTCAGACTTCACAAACATGA
JMFF025O09+                                                   CTCAGACTTCACAAACATGA
                      ____________________________________________________________
consensus                               CAAGCCCTCCCGGCGTCTTCGTCTCAGACTTCACAAACATGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS151D07+           AGTATAACCCCTTTCCCTTGTTTAATCCAGGCACGTAAAGGTTCATAACAGGCATGAGAA
JMFF043L14+           AGTATAACCCCTTTCCCTTGTTTAATCCAGGCACGTAAAGGTTCATAACAGGCATGAGAA
JMFF018M18+                                   ATCCAGGCACGTAAAGGTTCATAACAGGCATGAGAA
JMFF042C19+                                                 AGGTTCATAACAGGCATGAGAA
JMFF005M05+                                                         AACAGGCATGAGAA
JMFS139H01+                                                 AGGTTCATAACAGGCATGAGAA
JMFF025O09+           AGTATAACCCCTTTCCCTTGTTTAATCCAGGCACGTAAAGGTTCATAACAGGCATGAGAA
                      ____________________________________________________________
consensus             AGTATAACCCCTTTCCCTTGTTTAATCCAGGCACGTAAAGGTTCATAACAGGCATGAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS151D07+           GGCTGTAAAGAAGTTGACGACGATCCAGCTCCTCTTTGATTGTGGGCATCAATTTTCTCT
JMFF043L14+           GGCTGTAAAGAAGTTGACGACGATCCAGCTCCTCTTTGATTGTGGGCATCAATTTTCTCT
JMFF018M18+           GGCTGTAAAGAAGTTGACGACGATCCAGTTCCTCTTTGATTGTGGGCATCAATTTTCTCT
JMFF042C19+           GGCTGTAAAGAAGTTGACGACGATCCAGCTCCTCTTTGATTGTGGGCATCAATTTTCTCT
JMFF005M05+           GGCTGTAAAGAAGTTGACGACGATCCAGTTCCTCTTTGATTGTGGGCATCAATTTTCTCT
JMFS139H01+           GGCTGTAAAGAAGTTGACGACGATCCAGCTCCTCTTTGATTGTGGGCATCAATTTTCTCT
JMFF025O09+           GGCTGTAAAGAAGTTGACGACGATCCAGCTCCTCTTTGATTGTGGGCATCAATTTTCTCT
                      ____________________________________________________________
consensus             GGCTGTAAAGAAGTTGACGACGATCCAGCTCCTCTTTGATTGTGGGCATCAATTTTCTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS151D07+           CGCCAGCTGACGTTCCAGAGCTGGTGAGGAACTCAGAGATGGGGTGAGAAGACAGAATTG
JMFF043L14+           CGCCAGCTGACGTTCCAGAGCTGGTGAGGAACTCAGAGATGGGGTGAGAAGACAGAATTG
JMFF018M18+           CGCCAGCTGACGTTCCAGAGCTGGTGAGGAACTCAGAGATGGGGTGAGAAGACAGAATTG
JMFF042C19+           CGCCAGCTGACGTTCCAGAGCTGGTGAGGAACTCAGAGATGGGGTGAGAAGACAGAATTG
JMFF005M05+           CGCCAGCTGACGTTCCAGAGCTGGTGAGGAACTCAGAGATGGGGTGAGAAGACAGAATTG
JMFS139H01+           CGCCAGCTGACGTTCCAGAGCTGGTGAGGAACTCAGAGATGGGGTGAGAAGACAGAATTG
JMFF025O09+           CGCCAGCTGACGTTCCAGAGCTGGTGAGGAACTCAGAGATGGGGTGAGAAGACAGAATTG
                      ____________________________________________________________
consensus             CGCCAGCTGACGTTCCAGAGCTGGTGAGGAACTCAGAGATGGGGTGAGAAGACAGAATTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS151D07+           GAGAGCGGTCGCCGTTAGCGATGCGTTGGATCTCCGGCTGGAGATCCTCGTAGGTTACTA
JMFF043L14+           GAGAGCGGTCGCCGTTAGCGATGCGTTGGATCTCCGGCTGGAGATCCTCGTAGGTTACTA
JMFF018M18+           GAGAGCGGTCGCCGTTAGCGATGCGTTGGATCTCCGGCTGGAGATCCTCGTAGGTTACTA
JMFF042C19+           GAGAGCGGTCGCCGTTAGCGATGCGTTGGATCTCCGGCTGGAGATCCTCGTAGGTTACTA
JMFF005M05+           GAGAGCGGTCGCCGTTAGCGATGCGTTGGATCTCCGGCTGGAGATCCTCGTAGGTTACTA
JMFS139H01+           GAGAGCGGTCGCCGTTAGCGATGCGTTGGATCTCCGGCTGGAGATCCTCGTAGGTTACTA
JMFF025O09+           GAGAGCGGTCGCCGTTAGCGATGCGTTGGATCTCCGGCTGGAGATCCTCGTAGGTTACTA
                      ____________________________________________________________
consensus             GAGAGCGGTCGCCGTTAGCGATGCGTTGGATCTCCGGCTGGAGATCCTCGTAGGTTACTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS151D07+           CCGGAACTTTGGACTTAAACGTTTCGCGGTCAGTGGCGCCGTTAAGTCCGAAACGCTGAA
JMFF043L14+           CCGGAACTTTGGACTTAAACGTTTCGCGGTCAGTGGCGCCGTTAAGTCCGAAACGCTGAA
JMFF018M18+           CCGGAACTTTGGACTTAAACGTTTCGCGGTCAGTGGCGCCGTTAAGTCCGAAACGCTGAA
JMFF042C19+           CCGGAACTTTGGACTTAAACGTTTCGCGGTCAGTGGCGCCGTTAAGTCCGAAACGCTGAA
JMFF005M05+           CCGGAACTTTGGACTTAAACGTTTCGCGGTCAGTGGCGCCGTTAAGTCCGAAACGCTGAA
JMFS139H01+           CCGGAACTTTGGACTTAAACGTTTCGCGGTCAGTGGCGCCGTTAAGTCCGAAACGCTGAA
JMFF025O09+           CCGGAACTTTGGACTTAAACGTTTCGCGGTCAGTGGCGCCGTTAAGTCCGAAACGCTGAA
                      ____________________________________________________________
consensus             CCGGAACTTTGGACTTAAACGTTTCGCGGTCAGTGGCGCCGTTAAGTCCGAAACGCTGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS151D07+           GGTACTCGGTCTGTGAATTCCGGGAAAGAATCTCGGCCAACACTCTCTCTTGAACGGCGT
JMFF043L14+           GGTACTCGGTCTGTGAATTCCGGGAAAGAATCTCGGCCAACACTCTCTCTTGAACGGCGT
JMFF018M18+           GGTACTCGGTCTGTGAATTCCGGGAAAGAATCTCGGCCAACACTCTCTCTTGAACGGCGT
JMFF042C19+           GGTACTCGGTCTGTGAATTCCGGGAAAGAATCTCGGCCAACACTCTCTCTTGAACGGCGT
JMFF005M05+           GGTACTCGGTCTGTGAATTCCGGGAAAGAATCTCGGCCAACACTCTCTCTTGAACGGCGT
JMFS139H01+           GGTACTCGGTCTGTGAATTCCGGGAAAGAATCTCGGCCAACACTCTCTCTTGAACGGCGT
JMFF025O09+           GGTACTCGGTCTGTGAATTCCGGGAAAGAATCTCGGCCAACACTCTCTCTTGAACGGCGT
                      ____________________________________________________________
consensus             GGTACTCGGTCTGTGAATTCCGGGAAAGAATCTCGGCCAACACTCTCTCTTGAACGGCGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS151D07+           CGGCATTTCGGGTCATCTCTTCAATGAACTGAAGTGCCTTGGCGTCTTTCTCGCAGGCCG
JMFF043L14+           CGGCATTTCGGGTCATCTCTTCAATGAACTGAAGTGCCTTGGCGTCTTTCTCGCAGGCCG
JMFF018M18+           CGGCATTTCGGGTCATCTCTTCAATGAACTGAAGTGCCTTGGCGTCTTTCTCGCAGGCCG
JMFF042C19+           CGGCATTTCGGGTCATCTCTTCAATGAACTGAAGTGCCTTGGCGTCTTTCTCGCAGGCCG
JMFF005M05+           CGGCATTTCGGGTCATCTCTTCAATGAACTGAAGTGCCTTGGCGTCTTTCTCGCAGGCCG
JMFS139H01+           CGGCATTTCGGGTCATCTCTTCAATGAACTGAAGTGCCTTGGCGTCTTTCTCGCAGGCCG
JMFF025O09+           CGGCATTTCGGGTCATCTCTTCAATGAACTGAAGTGCCTTGGCGTCTTTCTCGCAGGCCG
                      ____________________________________________________________
consensus             CGGCATTTCGGGTCATCTCTTCAATGAACTGAAGTGCCTTGGCGTCTTTCTCGCAGGCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS151D07+           GAGGACCCAACGGCGACGTTAAAACGGAGTCAACCGCCATTTATGGAGTTCTCAGGAAAG
JMFF043L14+           GAGGACCCAACGGCGACGTTAAAACGGAGTCAACCGCCATTTATGGAGTTCTCAGGAAAG
JMFF018M18+           GAGGACCCAACGGCGACGTTAAAACGGAGTCAACCGCCATTTATGGAGTTCTCAGGAAAG
JMFF042C19+           GAGGACCCAACGGCGACGTTAAAACGGAGTCAACCGCCATTTATGGAGTTCTCAGGAAAG
JMFF005M05+           GAGGACCCAACGGCGACGTTAAAACGGAGTCAACCGCCATTTATGGAGTTCTCAGGAAAG
JMFS139H01+           GAGGACCCAACGGCGACGTTAAAACGGAGTCAACCGCCATTTATGGAGTTCTCAGGAAAG
JMFF025O09+           GAGGACCCAACGGCGACGTTAAAACGGAGTCAACCGCCATTTATGGAGTTCTCAGGAAAG
                      ____________________________________________________________
consensus             GAGGACCCAACGGCGACGTTAAAACGGAGTCAACCGCCATTTATGGAGTTCTCAGGAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS151D07+           TATATATATAATAATATTACAGTTTTTAGTTTAAGAGAGAGGGATCGGAGGGAGAGACTA
JMFF043L14+           TATATATATAATAATATTACAGTTTTTAGTTTAAGAGAGAGGGATCGGAGGGAGAGACTA
JMFF018M18+           TATATATATAATAATATTACAGTTTTTAGTTTAAGAGAGAGGGATCGGAGGGAGAGACTA
JMFF042C19+           TATATATATAATAATATTACAGTTTTTAGTTTAAGAGAGAGGGATCGGAGGGAGAGACTA
JMFF005M05+           TATATATATAATAATATTACAGTTTTTAGTTTAAGAGAGAGGGATCGGAGGGAGAGACTA
JMFS139H01+           TATATATATAATAATATTACAGTTTTTAGTTTAAGAGAGAGGGATCGGAGGGAGAGACTA
JMFF025O09+           TATATATATAATAATATTACAGTTTTTAGTTTAAGAGAGAGGGATCGGAGGGAGAGACTA
                      ____________________________________________________________
consensus             TATATATATAATAATATTACAGTTTTTAGTTTAAGAGAGAGGGATCGGAGGGAGAGACTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS151D07+           AGGATCGGAGATCGGAGATCGGAGAGCTTTGCCTTT                        
JMFF043L14+           AGGATCGGAGATCGGAGATCGGAGAGCTTTGCCTTTGCGTTTGGGGTGCAGTAGT     
JMFF018M18+           AGGATCGGAGATCGGAGATCGGAGAGCTTTGCCTTTGCGTTTGGGGTGCAGTAGT     
JMFF042C19+           AGGATCGGAGATCGGAGATCGGAGAGCTTTGCCTTTGCGTTTGGGGTGCAGTAGT     
JMFF005M05+           AGGATCGGAGATCGGAGATCGGAGAGCTTTGCCTTTGCGTTTGGGGTGCAGTAGT     
JMFS139H01+           AGGATCGGAGATCGGAGATCGGAGAGCTTTGCCTTTGCGTTTGGG               
JMFF025O09+           AGGATCGGAGATCGGAGATCGGAGAGCTTTGCCTTTGCGTTTGGGGTGCAGTAGTGAGGG
                      ____________________________________________________________
consensus             AGGATCGGAGATCGGAGATCGGAGAGCTTTGCCTTTGCGTTTGGGGTGCAGTAGTGAGGG