Contig 005978:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025M24Sequence589005978 (5)emb|CDP04050.1|8e-67unnamed protein product [Coffea canephora]739013726 (4)emb|CDP04050.1|4e-66unnamed protein product [Coffea canephora]
JMFF028K09Sequence518005978 (5)emb|CDP04050.1|2e-64unnamed protein product [Coffea canephora]100013726 (4)
JMFF037F09Sequence465005978 (5)emb|CDP04050.1|1e-04unnamed protein product [Coffea canephora]426005978 (5)emb|CDP04050.1|9e-05unnamed protein product [Coffea canephora]
JMSF033K05Sequence713005978 (5)emb|CDP04050.1|1e-95unnamed protein product [Coffea canephora]731013726 (4)gb|EYU46015.1|8e-59hypothetical protein MIMGU_mgv1a009125mg [Erythranthe guttata]

Alignment

This contig is upended


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JMSF033K05+                             GGTCCAGTTACGAACAGTGTAATTGCTTGATATGGNCAAGAT
                      ____________________________________________________________
consensus                               GGTCCAGTTACGAACAGTGTAATTGCTTGATATGGNCAAGAT
 
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JMSF033K05+           TGATATAGAAGCTGTGTAGATGAANCCTTGAACTTCTTCTGGATGGTATTAGTCATAATC
                      ____________________________________________________________
consensus             TGATATAGAAGCTGTGTAGATGAANCCTTGAACTTCTTCTGGATGGTATTAGTCATAATC
 
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JMSF033K05+           TGTGCAATGCACGTCGTAACAATTGCAAGCAGAGATAAAACAGAACCCAGCAAGTTGAGC
                      ____________________________________________________________
consensus             TGTGCAATGCACGTCGTAACAATTGCAAGCAGAGATAAAACAGAACCCAGCAAGTTGAGC
 
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JMSF033K05+           TGTAGATCAGTCACTGTTGCAATTCCAACACCTAAGAGAAGGACAACCAGTGCAACCTGG
                      ____________________________________________________________
consensus             TGTAGATCAGTCACTGTTGCAATTCCAACACCTAAGAGAAGGACAACCAGTGCAACCTGG
 
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JMSF033K05+           ACCTTCCTACTGAACTTTTTCCTGAAGAATAGAGTCTCCAAAAGAACTGTACAAGGGATG
JMFF028K09+                                 TGAAGAATAGAGTCTCCAAAAGAACTGTACAAGGGATG
JMFF025M24+                      GAACTTTTTCCTGAAGAATAGAGTCTCCAAAAGAACTGTACAAGGGATG
                      ____________________________________________________________
consensus             ACCTTCCTACTGAACTTTTTCCTGAAGAATAGAGTCTCCAAAAGAACTGTACAAGGGATG
 
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JMSF033K05+           ATTGCCAATTTTGTCATCTGATAAAAGCCAACAGAATTGAACCCCAGACTTAGATTGAGA
JMFF028K09+           ATTGCCAATTTTGTCATCTGATAAAAGCCAACAGAATTGAACCCCAGACTTAGATTGAGA
JMFF025M24+           ATTGCCAATTTTGTCATCTGATAAAAGCCAACAGAATTGAACCCCAGACTTAGATTGAGA
                      ____________________________________________________________
consensus             ATTGCCAATTTTGTCATCTGATAAAAGCCAACAGAATTGAACCCCAGACTTAGATTGAGA
 
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JMSF033K05+           AGGCCAATGGAAGTCCCATTCAGTATTCCAAACCCCATGACAGCTCGTGGATCAAAAGGC
JMFF028K09+           AGGCCAATGGAAGTCCCATTCAGTATTCCAAACCCCATGACAGCTCGTGGATCAAAAGGC
JMFF025M24+           AGGCCAATGGAAGTCCCATTCAGTATTCCAAACCCCATGACAGCTCGTGGATCAAAAGGC
                      ____________________________________________________________
consensus             AGGCCAATGGAAGTCCCATTCAGTATTCCAAACCCCATGACAGCTCGTGGATCAAAAGGC
 
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JMSF033K05+           TTGTGCTCAAACAATTTCATCCATAATGCCACATGAAGGGAACAAAATGTAACCAGAAGA
JMFF028K09+           TTGTGCTCAAACAATTTCATCCATAATGCCACATGAAGGGAACAAAATGTAACCAGAAGA
JMFF025M24+           TTGTGCTCAAACAATTTCATCCATAATGCCACATGAAGGGAACAAAATGTAACCAGAAGA
                      ____________________________________________________________
consensus             TTGTGCTCAAACAATTTCATCCATAATGCCACATGAAGGGAACAAAATGTAACCAGAAGA
 
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JMSF033K05+           TGCCAACTCGTCAAAGTTGTAGCAAATGTGAAATCAAGTGTGCTTATAAGGGCCTTGTTG
JMFF028K09+           TGCCAACTCGTCAAAGTTGTAGCAAATGTGAAATCAAGTGTGCTTATAAGGGCCTTGTTG
rJMFF037F09-                                CAAATGTGAAATCAAGTGTGCTTATAAGGGCCTTGTTG
JMFF037F09+                                 CAAATGTGAAATCAAGTGTGCTTATAAGGGCCTTGTTG
JMFF025M24+           TGCCAACTCGTCAAAGTTGTAGCAAATGTGAAATCAAGTGTGCTTATAAGGGCCTTGTTG
                      ____________________________________________________________
consensus             TGCCAACTCGTCAAAGTTGTAGCAAATGTGAAATCAAGTGTGCTTATAAGGGCCTTGTTG
 
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JMSF033K05+           CAAATCACAATAGAGACAGAAGATACCACCGACAAGCTGAGTGCCCCAATTGTCCCCAGC
JMFF028K09+           CAAATCACAATAGAGACAGAAGATACCACCGACAAGCTGAGTGCCCCAATTGTCCCCAGC
rJMFF037F09-          CAAATCACAATAGAGACAGAAGATACCACCGACAAGCTGAGTGCCCCAATTGTCCCCAGC
JMFF037F09+           CAAATCACAATAGAGACAGAAGATACCACCGACAAGCTGAGTGCCCCAATTGTCCCCAGC
JMFF025M24+           CAAATCACAATAGAGACAGAAGATACCACCGACAAGCTGAGTGCCCCAATTGTCCCCAGC
                      ____________________________________________________________
consensus             CAAATCACAATAGAGACAGAAGATACCACCGACAAGCTGAGTGCCCCAATTGTCCCCAGC
 
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JMSF033K05+           TGAAACCGCTGGCCTTCGCTCATTTTCGCACCCACTTTTCCAATCTCCAGTCTCAAAACC
JMFF028K09+           TGAAACCGCTGGCCTTCGCTCATTTTCGCACCCACTTTTCCAATCTCCAGTCTCAAAACC
rJMFF037F09-          TGAAACCGCTGGCCTTCGCTCATTTTCGCACCCACTTTTCCAATCTCCAGTCTCAAAACC
JMFF037F09+           TGAAACCGCTGGCCTTCGCTCATTTTCGCACCCACTTTTCCAATCTCCAGTCTCAAAACC
JMFF025M24+           TGAAACCGCTGGCCTTCGCTCATTTTCGCACCCACTTTTCCAATCTCCAGTCTCAAAACC
                      ____________________________________________________________
consensus             TGAAACCGCTGGCCTTCGCTCATTTTCGCACCCACTTTTCCAATCTCCAGTCTCAAAACC
 
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rJMFF037F09-          AGCTCTGCTCCGTGAAAACCCTAGATCTGCTACTTCAGGTCCAACTCCAGATATTATATC
JMFF037F09+           AGCTCTGCTCCGTGAAAACCCTAGATCTGCTACTTCAGGTCCAACTCCAGATATTATATC
JMFF025M24+           AGCTCTGCTCCGTGAAAACCCTAGATCTGCTACTTCAGGTCCAACTCCAGATATTATATC
                      ____________________________________________________________
consensus             AGCTCTGCTCCGTGAAAACCCTAGATCTGCTACTTCAGGTCCAACTCCAGATATTATATC
 
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rJMFF037F09-          ATATATTGTGTGTATGCGAGCACAAACATGCATGTATATATACACATATTTCAGTGTATA
JMFF037F09+           ATATATTGTGTGTATGCGAGCACAAACATGCATGTATATATACACATATTTCAGTGTATA
JMFF025M24+           ATATATTGTGTGTATGCGAGCACAAACATGCATGTATATATACACATATTTCAGTGTATA
                      ____________________________________________________________
consensus             ATATATTGTGTGTATGCGAGCACAAACATGCATGTATATATACACATATTTCAGTGTATA
 
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rJMFF037F09-          CATTGAGAAAGAGAGAGAGAGAAACATAGTATAGAACCTGTAGGAC              
JMFF037F09+           CATTGAGAAAGAGAGAGAGAGAAACATAGTATAGAACCTGTAGGAC              
JMFF025M24+           CATTGAGAAAGAGAGAGAGAGAAACATAGTATAGAACCTGTAGGACATAGGATCCTTGAG
                      ____________________________________________________________
consensus             CATTGAGAAAGAGAGAGAGAGAAACATAGTATAGAACCTGTAGGACATAGGATCCTTGAG