Contig 005973:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011A01Sequence475005973 (7)ref|XP_007205270.1|6e-58hypothetical protein PRUPE_ppa006473mg [Prunus persica] ref|XP_007205271.1| hypo770004080 (7)emb|CDP15204.1|4e-113unnamed protein product [Coffea canephora]
JMFF012P03Sequence616005973 (7)gb|KDO45354.1|5e-92hypothetical protein CISIN_1g015298mg [Citrus sinensis]774020165emb|CDP15204.1|9e-82unnamed protein product [Coffea canephora]
JMFF024N14Sequence496005973 (7)ref|XP_007205270.1|2e-59hypothetical protein PRUPE_ppa006473mg [Prunus persica] ref|XP_007205271.1| hypo743004080 (7)emb|CDP15204.1|6e-105unnamed protein product [Coffea canephora]
JMFF027E11Sequence573005973 (7)gb|KDO45354.1|3e-89hypothetical protein CISIN_1g015298mg [Citrus sinensis]716004080 (7)emb|CDP15204.1|1e-99unnamed protein product [Coffea canephora]
JMFF030B08Sequence346005973 (7)gb|KDO45355.1|4e-23hypothetical protein CISIN_1g015298mg [Citrus sinensis]684004080 (7)emb|CDP15204.1|1e-97unnamed protein product [Coffea canephora]
JMFF038C23Sequence616005973 (7)gb|KDO45354.1|6e-96hypothetical protein CISIN_1g015298mg [Citrus sinensis]697004080 (7)gb|AAW80932.1|4e-87putative protein kinase, partial [Astragalus membranaceus]
JMFS051C09Sequence595005973 (7)gb|KDO45354.1|2e-91hypothetical protein CISIN_1g015298mg [Citrus sinensis]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS051C09+                                                       AGAACCAGATTAAGAT
JMFF038C23+                                      TTTCAGGTACATATTCAAGAACCAGATTAAGAT
JMFF027E11+                                                                 TAAGAT
JMFF012P03+                                                       AGAACCAGATTAAGAT
                      ____________________________________________________________
consensus                                        TTTCAGGTACATATTCAAGAACCAGATTAAGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS051C09+           ACAGTTCATCCTTATCAGTTGTAGAAAAGAAGCAGTGCTTCAATGACACTACATTTGGGT
JMFF038C23+           ACAGTTCATCCTTATCAGTTGTAGAAAAGAAGCAGTGCTTCAATGACACTACATTTGGGT
JMFF027E11+           ACAGTTCATCCTTATCAGTTGTAGAAAAGAAGCAGTGCTTCAATGACACTACATTTGGGT
JMFF012P03+           ACAGTTCATCCTTATCAGTTGTAGAAAAGAAGCAGTGCTTCAATGACACTACATTTGGGT
                      ____________________________________________________________
consensus             ACAGTTCATCCTTATCAGTTGTAGAAAAGAAGCAGTGCTTCAATGACACTACATTTGGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS051C09+           GGTCAAGAAGACGAATGGTCTGTAATTCCCGGTTCTTGTATCTTTTGTCTTGAAGAACTT
JMFF011A01+                                                           CTTGAAGAACTT
JMFF038C23+           GGTCAAGAAGACGCATGGTCTGTAATTCCCGGTTCTTGTATCTTTTGTCTTGAAGAACTT
JMFF027E11+           GGTCAAGAAGACGCACGGTCTGTAATTCCCGGTTCTTGTATCTTTTGTCTTGAAGAACTT
JMFF012P03+           GGTCAAGAAGACGCATGGTCTGTAATTCCCGGTTCTTGTATCTTTTGTCTTGAAGAACTT
JMFF024N14+                                                       TTGTCTTGAAGAACTT
                      ____________________________________________________________
consensus             GGTCAAGAAGACGCATGGTCTGTAATTCCCGGTTCTTGTATCTTTTGTCTTGAAGAACTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS051C09+           TCTTTATAGCAACAGTTTCACCAGTTTCTAAGCATTTAGCCTGAAATACTACACCAAATG
JMFF011A01+           TCTTTATAGCAACAGTTTCACCAGTTTCTAAGCATTTAGCCTGAAATACTACACCAAATG
JMFF038C23+           TCTTTATAGCAACAGTTTCACCAGTTTCTAAGCATTTAGCCTGAAATACTACACCAAATG
JMFF027E11+           TCTTTATAGCAACAGTTTCACCAGTTTCTAAGCATTTAGCCTGAAATACTACACCAAATG
JMFF012P03+           TCTTTATAGCAACAGTTTCACCAGTTTCTAAGCATTTAGCCTGAAATACTACACCAAATG
JMFF024N14+           TCTTTATAGCAACAGTTTCACCAGTTTCTAAGCATTTAGCCTGAAATACTACACCAAATG
                      ____________________________________________________________
consensus             TCTTTATAGCAACAGTTTCACCAGTTTCTAAGCATTTAGCCTGAAATACTACACCAAATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS051C09+           ATCCATGCCCAACAATTCGTTCAGCCATGTAACTTATAGTCTGTTTTGGTTGACCATTTT
JMFF011A01+           ATCCATGCCCAACAATTCGTTCAGCCACGTAACTTATAGTCTGTTTTGGTTGACCATTTT
JMFF038C23+           ATCCATGCCCAACAATTCGTTCAGCCACGTAACTTATAGTCTGTTTTGGTTGACCATTTT
JMFF027E11+           ATCCATGCCCAACAATTCGTTCAGCCATGTAACTTATAGTCTGTTTTGGTTGACCATTTT
JMFF012P03+           ATCCATGCCCAACAATTCGTTCAGCCATGTAACTTATAGTCTGTTTTGGTTGACCATTTT
JMFF024N14+           ATCCATGCCCAACAATTCGTTCAGCCATGTAACTTATAGTCTGTTTTGGTTGACCATTTT
                      ____________________________________________________________
consensus             ATCCATGCCCAACAATTCGTTCAGCCATGTAACTTATAGTCTGTTTTGGTTGACCATTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS051C09+           GACCACCAATAGTTGTCACTATTATGTGACCTGCCTCAGTCCCATTACCATCAACAACTG
JMFF011A01+           GACCACCAATAGTTGTCACTATTATGTGACCTGCCTCAGTCCCATTACCATCAACAACTG
JMFF038C23+           GACCACCAATAGTTGTCACTATTATGTGACCTGCCTCAGTCCCATTACCATCAACAACTG
JMFF027E11+           GACCACCAATAGTTGTCACTATTATGTGACCTGCCTCAGTCCCATTACCATCAACAACTG
JMFF012P03+           GACCACCAATAGTTGTCACTATTATGTGACCTGCCTCAGTCCCATTACCATCAACAACTG
JMFF030B08+                         GTCACTATTATGTGACCTGCCTCAGTCCCATTACCNTCAACAACTG
JMFF024N14+           GACCACCAATAGTTGTCACTATTATGTGACCTGCCTCAGTCCCATTACCATCAACAACTG
                      ____________________________________________________________
consensus             GACCACCAATAGTTGTCACTATTATGTGACCTGCCTCAGTCCCATTACCATCAACAACTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS051C09+           CTGCTTCCATATCCTTATCATCCCTGATTTTCATGTCATTCATCTCCTCAGGCAAACTAT
JMFF011A01+           CTGCTTCCATATCCTTATCATCCCTGATTTTCATGTCATTCATCTCCTCAGGCAAACTAT
JMFF038C23+           CTGCTTCCATATCCTTATCATCCCTGATTTTCATGTCATTCATCTCCTCAGGCAAACTAT
JMFF027E11+           CTGCTTCCATATCCTTATCATCCCTGATTTTCATGTCATTCATCTCCTCAGGCAAACTAT
JMFF012P03+           CTGCTTCCATATCCTTATCATCCCTGATTTTCATGTCATTCATCTCCTCAGGCAAACTAT
JMFF030B08+           CTGCTTCCATATCNTTATCATCCCTGATTTTCATGTCATTCATCTCCTCAGGCAAACTAT
JMFF024N14+           CTGCTTCCATATCCTTATCATCCCTGATTTTCATGTCATTCATCTCCTCAGGCAAACTAT
                      ____________________________________________________________
consensus             CTGCTTCCATATCCTTATCATCCCTGATTTTCATGTCATTCATCTCCTCAGGCAAACTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS051C09+           CAACACCAACAGTGTGACCACTGGATTCTCTCATACCAGAAGCAGGTGGTACACCCACTG
JMFF011A01+           CAACACCAACAGTGTGACCACTGGATTCTCTCATACCAGAAGCAGGTGGTACACCCACTG
JMFF038C23+           CAACACCAACAGTGTGACCACTGGATTCTCTCATACCAGAAGCAGGTGGTACACCCACTG
JMFF027E11+           CAACACCAACAGTGTGACCACTGGATTCTCTCATACCAGAAGCAGGTGGTACACCCACTG
JMFF012P03+           CAACACCAACAGTGTGACCACTGGATTCTCTCATACCAGAAGCAGGTGGTACACCCACTG
JMFF030B08+           CAACACCAACAGTGTGACCACTGGATTCTCTCATACCAGAAGCAGGTGGTACACCCACTG
JMFF024N14+           CAACACCAACAGTGTGACCACTGGATTCTCTCATACCAGAAGCAGGTGGTACACCCACTG
                      ____________________________________________________________
consensus             CAACACCAACAGTGTGACCACTGGATTCTCTCATACCAGAAGCAGGTGGTACACCCACTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS051C09+           ATGCCATTTATTAGGAACTTTCTTACTATATCACCTCAACAAGTCATTTATCTATGAAAT
JMFF011A01+           ATGCCATTTATTAGGAACTTTCTTACTATATCACCTCAACAAGTCATTTATCTATGAAAT
JMFF038C23+           ATGCCATTTATTAGGAACTTTCTTACTATATCACCTCAACAAGTCATTTATCTATGAAAT
JMFF027E11+           ATGCCATTTATTAGGAACTTTCTTACTATATCACCTCAACAAGTCATTTATCTATGAAAT
JMFF012P03+           ATGCCATTTATTAGGAACTTTCTTACTATATCACCTCAACAAGTCATTTATCTATGAAAT
JMFF030B08+           ATGCCATTTATTAGGAACTTTCTTACTATATCACCTCAACAAGTCATTTATCTATGAAAT
JMFF024N14+           ATGCCATTTATTAGGAACTTTCTTACTATATCACCTCAACAAGTCATTTATCTATGAAAT
                      ____________________________________________________________
consensus             ATGCCATTTATTAGGAACTTTCTTACTATATCACCTCAACAAGTCATTTATCTATGAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS051C09+           CAGAATCTTGAGGAGATCGACAACACAGCGATCACCAGCGGCTGGGCTTGATTGTTTGCA
JMFF011A01+           CAGAATCTTGAGGAGATCGACAACACAGCGATCACCAGCGGCTGGGCTTGATTGTTTGCA
JMFF038C23+           CAGAATCTTGAGGAGATCGACAACACAGCGATCACCAGCGGCTGGGCTTGATTGTTTGCA
JMFF027E11+           CAGAATCTTGAGGAGATCGACAACACAGCGATCACCAGCGGCTGGGCTTGATTGTTTGCA
JMFF012P03+           CAGAATCTTGAGGAGATCGACAACACAGCGATCACCAGCGGCTGGGCTTGATTGTTTGCA
JMFF030B08+           CAGAATCTTGAGGAGATCGACAACACAGCGATCACCAGCGGCTGGGCTTGATTGTTTGCA
JMFF024N14+           CAGAATCTTGAGGAGATCGACAACACAGCGATCACCAGCGGCTGGGCTTGATTGTTTGCA
                      ____________________________________________________________
consensus             CAGAATCTTGAGGAGATCGACAACACAGCGATCACCAGCGGCTGGGCTTGATTGTTTGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS051C09+           GCCGAGATGGCACCACAAGCATTAGAGAGAGAAGAACAG                     
JMFF011A01+           GCCGAGATGGCACCACAAGCATTAGAGAGAGAAGAACAGGAGA                 
JMFF038C23+           GCCGAGATGGCACCACAAGCATTAGAGAGAGAAGAACAGGAGA                 
JMFF027E11+           GCCGAGATGGCACCACAAGCATTAGAG                                 
JMFF012P03+           GCCGAGATGGCACCACAAGCATTAGAGAGAGAAGAACAGGAGAGAGAATCTGATATTGAT
JMFF030B08+           GCCGAGATGGCACCACAAGCATTAGAGAGAGAAGAACAGGAGAGAGAATCTGATATTGAT
JMFF024N14+           GCCGAGATGGCACCACAAGCATTAGAGAGAGAAGAACAGGAGAGAGAATCTGATATTGAT
                      ____________________________________________________________
consensus             GCCGAGATGGCACCACAAGCATTAGAGAGAGAAGAACAGGAGAGAGAATCTGATATTGAT