Contig 005970:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023I03Sequence398005970 (3)gb|AAB07724.1|2e-34Pn47p [Ipomoea nil]747009742 (3)gb|AAB07724.1|5e-46Pn47p [Ipomoea nil]
JMFF023I23Sequence377005970 (3)gb|AAB07724.1|6e-32Pn47p [Ipomoea nil]693009742 (3)ref|XP_009601720.1|3e-41PREDICTED: phospholipase A1-II 1-like [Nicotiana tomentosiformis]
JMFF036C16Sequence487005970 (3)gb|AAB07724.1|4e-54Pn47p [Ipomoea nil]686009742 (3)ref|XP_009601720.1|3e-38PREDICTED: phospholipase A1-II 1-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF036C16+                                               GTTCCCCTCCAAACGACCAGAATG
                      ____________________________________________________________
consensus                                                 GTTCCCCTCCAAACGACCAGAATG
 
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JMFF036C16+           TCTNTCCGTCCCAAAACCTCCTTTCCCTTGTCGGTGGCAACAGCAACATATCCACCCCAA
                      ____________________________________________________________
consensus             TCTNTCCGTCCCAAAACCTCCTTTCCCTTGTCGGTGGCAACAGCAACATATCCACCCCAA
 
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JMFF023I23+                                      CGCACTGATTGGACATGATATCCTCCATGATGG
JMFF036C16+           TTTGACTCTTTCATCACTGCGTNTGCTCGCACTGATTGGACATGATATCCTCCATGATGG
JMFF023I03+                                      CGCACTGATTGGACATGATATCCTCCATGATGG
                      ____________________________________________________________
consensus             TTTGACTCTTTCATCACTGCGTNTGCTCGCACTGATTGGACATGATATCCTCCATGATGG
 
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JMFF023I23+           GCTCCGCATGTAGTTGAAGGAGTATAAAAGTACTTGGTGATAGTGTACTTGAAAGGATTT
JMFF036C16+           GCTCCGCATGTAGTTGAAGGAGTATAAAAGTACTTGGTGATAGTGTACTTGAAAGGATTT
JMFF023I03+           GCTCCGCATGTAGTTGAAGGAGTATAAAAGTACTTGGTGATAGTGTACTTGAAAGGATTT
                      ____________________________________________________________
consensus             GCTCCGCATGTAGTTGAAGGAGTATAAAAGTACTTGGTGATAGTGTACTTGAAAGGATTT
 
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JMFF023I23+           GCCTTTTCAAGCCCAGTNTCCTCAAGGAGGCTTTTNTTGGNGTAGCGGCTTAGCCCGGCA
JMFF036C16+           GCCTTNTCAAGCCCAGTNTCCTCAAGGAGGCTTTTNTTGGCGTAGCGGCTTAGCCCGGCA
JMFF023I03+           GCCTTNTCAAGCCCAGTNTCCTCAAGGAGGCTTTTNTTGGCGTAGCGGCTTAGCCCGGCA
                      ____________________________________________________________
consensus             GCCTTTTCAAGCCCAGTNTCCTCAAGGAGGCTTTTNTTGGCGTAGCGGCTTAGCCCGGCA
 
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JMFF023I23+           TACTTAGAAGTTGGTTCNCTGATGAAGGAGTCGTATACTGCTCCAATCATTGAACCATAG
JMFF036C16+           TACTTAGAAGTTGGTTCACTGATGAAGGAGTCGTATACTGCTCCAATCATTGAACCATAG
JMFF023I03+           TACTTAGAAGTTGGTTCACTGATGAAGGAGTCGTATACTGCTCCAATCATTGAACCATAG
                      ____________________________________________________________
consensus             TACTTAGAAGTTGGTTCACTGATGAAGGAGTCGTATACTGCTCCAATCATTGAACCATAG
 
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JMFF023I23+           TGAATGAGGTAGCGGNGAAGATCAGAATCCAAAGGGTNTAGTAACCCTTCCCAGTTGTCA
JMFF036C16+           TGAATGAGGTAGCGGNGAAGATCAGAATCCAAAGGGTNTAGTAACCCTTCCCAGTTGTCA
JMFF023I03+           TGAATGAGGTAGCGGCGAAGATCAGAATCCAAAGGGTNTAGTAACCCTTCCCAGTTGTCA
                      ____________________________________________________________
consensus             TGAATGAGGTAGCGGCGAAGATCAGAATCCAAAGGGTNTAGTAACCCTTCCCAGTTGTCA
 
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JMFF023I23+           CTCCCATTCAAAACTNTCCATNTTTTAGCAATGCTCTCCATTTTTTTATTATTATTTTTT
JMFF036C16+           CTCCCATTCAAAACTNTCCATNTNTTAGCAATGCTCTCCATTTTTTTATTATTA-TTTTT
JMFF023I03+           CTCCCATTCAAAACTNTCCATNTNTTAGCAATGCTCTCCATTTTTTTATTATTA-TTTTT
                      ____________________________________________________________
consensus             CTCCCATTCAAAACTNTCCATNTTTTAGCAATGCTCTCCATTTTTTTATTATTA-TTTTT
 
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JMFF023I23+           TTTTTCTGAATGTAATTAGCACTTAGGGGTGTTTCTTTGCTGAT                
JMFF036C16+           TTTTTCTGAATGTAATTAGCACTTAGGGGTGTTTCTTTGCTGAT                
JMFF023I03+           TTTTTCTGAATGTAATTAGCACTTAGGGGTGTTTCTTTGCTGATCTCGAGTACCCCTAAT
                      ____________________________________________________________
consensus             TTTTTCTGAATGTAATTAGCACTTAGGGGTGTTTCTTTGCTGATCTCGAGTACCCCTAAT