Contig 005967:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF023C10-                                         ACTTTTCATATATATATTTTTATGGACAA
                      ____________________________________________________________
consensus                                            ACTTTTCATATATATATTTTTATGGACAA
 
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rJMFF023C10-          AGAGAAGGAACCAGACAACATTACAACACCACTACAGACCCGACCACAGATCAGACTCGA
                      ____________________________________________________________
consensus             AGAGAAGGAACCAGACAACATTACAACACCACTACAGACCCGACCACAGATCAGACTCGA
 
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rJMFF023C10-          GAATAATAAGATAATTCAAACTATAAACACACATATATATAGGACATCATATGATAATAT
                      ____________________________________________________________
consensus             GAATAATAAGATAATTCAAACTATAAACACACATATATATAGGACATCATATGATAATAT
 
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rJMFF023C10-          TATTAATACAACTATTTTATTTCTTTATTTATTTTATTCCAATCTAGTAGTGTGTTAATA
                      ____________________________________________________________
consensus             TATTAATACAACTATTTTATTTCTTTATTTATTTTATTCCAATCTAGTAGTGTGTTAATA
 
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rJMFF023C10-          ACGTAACATGAAGTGGCAAGCCCAAGCTTTTAGTGCCTGCCGCTACCTCCACCGTAGCCA
                      ____________________________________________________________
consensus             ACGTAACATGAAGTGGCAAGCCCAAGCTTTTAGTGCCTGCCGCTACCTCCACCGTAGCCA
 
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rJMFF023C10-          CTTCCCTGTCCACCTCCGTAGCCGCCCGATCCGGATCTTGATCCGGCATACGACCCGGCA
JMFF023C10+                          CCGTAGCCGCCCGATCCGGATCTTGATCCGGCATACGACCCGGCA
                      ____________________________________________________________
consensus             CTTCCCTGTCCACCTCCGTAGCCGCCCGATCCGGATCTTGATCCGGCATACGACCCGGCA
 
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rJMFF023C10-          GAGGATCCGGCTTCGGATCCAGCCCCA-CCACCACCACCAGAGCTAGAACTCGAACTTGA
rJMFF047I22-                                      CCACCACCACCAGAGCTAGAACTCGAACTTGA
JMFF047I22+                                       CCACCACCACCAGAGCTAGAACTCGAACTTGA
JMFF023C10+           GAGGATCCGGCTTCGGATCCAGCCCCACCCACCACCACCAGAGCTAGAACTCGAACTTGA
                      ____________________________________________________________
consensus             GAGGATCCGGCTTCGGATCCAGCCCCACCCACCACCACCAGAGCTAGAACTCGAACTTGA
 
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rJMFF023C10-          ACTCGAGCTCGAGCTTGAACTACTGGAGCCACCGCCTGAACCCGAACCTGCTCCTGCCCC
rJMFF047I22-          ACTCGAGCTCGAGCTTGAACTACTGGAGCCACCGCCTGAACCCGAACCTGCTCCTGCCCC
JMFF047I22+           ACTCGAGCTCGAGCTTGAACTACTGGAGCCACCGCCTGAACCCGAACCTGCTCCTGCCCC
JMFF023C10+           ACTCGAGCTCGAGCTTGAACTACTGGAGCCACCGCCTGAACCCGAACCTGCTCCTGCCCC
                      ____________________________________________________________
consensus             ACTCGAGCTCGAGCTTGAACTACTGGAGCCACCGCCTGAACCCGAACCTGCTCCTGCCCC
 
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rJMFF023C10-          TGACCCACTACCGCTACCACCTAATCCAATACCAATGCCCGCACCAATACCGATGCCAAT
rJMFF047I22-          TGACCCACTACCGCTACCACCTAATCCAATACCAATGCCCGCACCAATACCGATGCCAAT
JMFF047I22+           TGACCCACTACCGCTACCACCTAATCCAATACCAATGCCCGCACCAATACCGATGCCAAT
JMFF023C10+           TGACCCACTACCGCTACCACCTAATCCAATACCAATGCCCGCACCAATACCGATGCCAAT
                      ____________________________________________________________
consensus             TGACCCACTACCGCTACCACCTAATCCAATACCAATGCCCGCACCAATACCGATGCCAAT
 
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rJMFF023C10-          ACCACCCAGGTCCAACCCTAACCCCTCCGTCCTTACTTGGGCCGCCTTTTCGGCCTTGAT
rJMFF047I22-          ACCACCCAGGTCCAACCCTAACCCCTCCGTCCTTACTTGGGCCGCCTTTTCGGCCTTGAT
JMFF047I22+           ACCACCCAGGTCCAACCCTAACCCCTCCGTCCTTACTTGGGCCGCCTTTTCGGCCTTGAT
JMFF023C10+           ACCACCCAGGTCCAACCCTAACCCCTCCGTCCTTACTTGGGCCGCCTTTTCGGCCTTGAT
                      ____________________________________________________________
consensus             ACCACCCAGGTCCAACCCTAACCCCTCCGTCCTTACTTGGGCCGCCTTTTCGGCCTTGAT
 
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rJMFF023C10-          GTCCCGACTCTGGGACACCACAAACACACTAGAAAATACAAGCAAAGCAACTAGAGCTGA
rJMFF047I22-          GTCCCGACTCTGGGACACCACAAACACACTAGAAAATACAAGCAAAGCAACTAGAGCTGA
JMFF047I22+           GTCCCGACTCTGGGACACCACAAACACACTAGAAAATACAAGCAAAGCAACTAGAGCTGA
JMFF023C10+           GTCCCGACTCTGGGACACCACAAACACACTAGAAAATACAAGCAAAGCAACTAGAGCTGA
                      ____________________________________________________________
consensus             GTCCCGACTCTGGGACACCACAAACACACTAGAAAATACAAGCAAAGCAACTAGAGCTGA
 
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rJMFF023C10-          CGCCGCGAATTTAGCCATGCTAGGAAGCTCACCAAGAGTGGCAAATCCTAGGTTGTGTGA
rJMFF047I22-          CGCCGCGAATTTAGCCATGCTAGGAAGCTCACCAAGAGTGGCAAATCCTAGGTTGTGTGA
JMFF047I22+           CGCCGCGAATTTAGCCATGCTAGGAAGCTCACCAAGAGTGGCAAATCCTAGGTTGTGTGA
JMFF023C10+           CGCCGCGAATTTAGCCATGCTAGGAAGCTCACCAAGAGTGGCAAATCCTAGGTTGTGTGA
                      ____________________________________________________________
consensus             CGCCGCGAATTTAGCCATGCTAGGAAGCTCACCAAGAGTGGCAAATCCTAGGTTGTGTGA
 
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rJMFF023C10-          CAAGG                                                       
rJMFF047I22-          CAAGGTTTCTTGTTTAGCTTCTATGGTGATAGTTGAGGGTTTTTGTGTATGGG       
JMFF047I22+           CAAGGTTTCTTGTTTAGCTTCTATGGTGATAGTTGAGGGTTTTTGTGTATGGG       
JMFF023C10+           CAAGGTTTCTTGTTTAGCTTCTATGGTGATAGTTGAGGGTTTTTGTGTATGGGTGGTGAC
                      ____________________________________________________________
consensus             CAAGGTTTCTTGTTTAGCTTCTATGGTGATAGTTGAGGGTTTTTGTGTATGGGTGGTGAC