clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMCP002G08 | Sequence | 574 | 005966 (11) | emb|CDP06201.1| | 4e-101 | unnamed protein product [Coffea canephora] | |||||
JMCP004F03 | Sequence | 617 | 005966 (11) | emb|CDP06201.1| | 3e-111 | unnamed protein product [Coffea canephora] | |||||
JMCP010E09 | Sequence | 622 | 005966 (11) | emb|CDP06201.1| | 2e-111 | unnamed protein product [Coffea canephora] | |||||
JMCP017G04 | Sequence | 614 | 005966 (11) | emb|CDP06201.1| | 1e-111 | unnamed protein product [Coffea canephora] | |||||
JMFF019L07 | Sequence | 521 | 005966 (11) | ref|XP_009588398.1| | 3e-77 | PREDICTED: carbonyl reductase [NADPH] 2-like [Nicotiana tomentosiformis] | 701 | 005966 (11) | emb|CDP06201.1| | 3e-66 | unnamed protein product [Coffea canephora] |
JMFF022J06 | Sequence | 544 | 005966 (11) | ref|XP_009588398.1| | 2e-74 | PREDICTED: carbonyl reductase [NADPH] 2-like [Nicotiana tomentosiformis] | 776 | 005966 (11) | emb|CDP06201.1| | 9e-77 | unnamed protein product [Coffea canephora] |
JMFN030A19 | Sequence | 599 | 005966 (11) | emb|CDP06201.1| | 5e-93 | unnamed protein product [Coffea canephora] | |||||
JMFN041A22 | Sequence | 639 | 005966 (11) | emb|CDP06201.1| | 2e-104 | unnamed protein product [Coffea canephora] | |||||
JMFS091A06 | Sequence | 223 | 005966 (11) |
This contig is upended
. : . : . : . : . : . :
rJMFF019L07- AATTTTACATTACATAATTCGATCCAAA
rJMFF022J06- ATTTTACATTACATAATTCGATCCAAA
____________________________________________________________
consensus AATTTTACATTACATAATTCGATCCAAA
. : . : . : . : . : . :
rJMFF019L07- TCAAATTCAGGTTATCCCTAGTATAAAAGGAGGATCGAAGATTACATATTAATCTGCATA
rJMFF022J06- TCAAATTCAGGTTATCCCTAGTATAAAAGGAGGATCGAAGATTACATATTAATCTGCATA
____________________________________________________________
consensus TCAAATTCAGGTTATCCCTAGTATAAAAGGAGGATCGAAGATTACATATTAATCTGCATA
. : . : . : . : . : . :
rJMFF019L07- ACCGGCCAGATGAATAAAGCCATAAACTACCAAGCTTTAAGAGATTGTAACATCTAAACC
rJMFF022J06- ACCGGCCAGATGAATAAAGCCATAAACTACCAAGCTTTAAGAGATTGTAACATCTAAACC
____________________________________________________________
consensus ACCGGCCAGATGAATAAAGCCATAAACTACCAAGCTTTAAGAGATTGTAACATCTAAACC
. : . : . : . : . : . :
rJMFF019L07- TCTTCACAAGAATCAACTATTGTCCTCTCAAATGCTATGTTGAGCCCGGGTGTGGGAGGT
rJMFF022J06- TCTTCACAAGAATCAACTATTGTCCTCTCAAATGCTATGTTGAGCCCGGGTGTGGGAGGT
____________________________________________________________
consensus TCTTCACAAGAATCAACTATTGTCCTCTCAAATGCTATGTTGAGCCCGGGTGTGGGAGGT
. : . : . : . : . : . :
JMFS091A06- AAGAACCAACTATTGTTTCAAAGAGAG
rJMFF019L07- ACTTGGGATTGGAAATTAACCTTTTGAGAGAAAAAGAACCAACTATTGTTTCAAAGAGAG
rJMFF022J06- ACTTGGGATTGGAAATTAACCTTTTGAGAGAAAAAGAACCAACTATTGTTTCAAAGAGAG
rJMCP017G04+ CAAAGAGAG
rJMCP004F03+ TTTCAAAGAGAG
JMCP010E09+ TTTCAAAGAGAG
____________________________________________________________
consensus ACTTGGGATTGGAAATTAACCTTTTGAGAGAAAAAGAACCAACTATTGTTTCAAAGAGAG
. : . : . : . : . : . :
JMFS091A06- GAGAAGATAGGCACACCAGGCA
rJMFF019L07- GAGAAGATAGGCACACCAGGCAGTGTATTTCCAGCGTCAACTATGTAAGTATTTCCAGAA
rJMFF022J06- GAGAAGATAGGCACACCAGGCAGTGTATTTCCAGCGTCAAATATGTAAGTATTTCCAGAA
rJMCP017G04+ cAGAAGATAGGCAgtggtccCtcTGTATTTCCAGCGTCAACTATGTAAGTATTTCCAGAA
rJMCP004F03+ GAGAAGATAGGCACACCAGGCAGTGTATTTCCAGCGTCAACTATGTAAGTATTTCCAGAA
JMCP010E09+ GAGAAGATAGGCACACCAGGCAGTGTATTTCCAGCGTCAACTATGTAAGTATTTCCAGAA
rJMCP002G08+ GTAAGTATTTCCAGAA
____________________________________________________________
consensus GAGAAGATAGGCACACCAGGCAGTGTATTTCCAGCGTCAACTATGTAAGTATTTCCAGAA
. : . : . : . : . : . :
rJMFF019L07- ATATATTCAGAGGAGTCGTGGATTAAGTAACGTACAAGTGACGTCAGTGCAGGATTTGAC
rJMFF022J06- ATATATTCAGAGGAGTCGTGGATTAAGTAACGTACAAGTGACGTCAGTGCAGGATTTGAC
rJMCP017G04+ ATATAaaCAGAGGAGTCGTGGATTAAGTAACGTACAAGTGACGTCAGTGCAGGATTTGAC
rJMCP004F03+ ATATATTCAGAGGAGTCGTGGACTAAGTAACGTACAAGTGACGTCAGTGCAGGATTTGAC
JMCP010E09+ ATATATTCAGAGGAGTCGTGGATTAAGTAACGTACAAGTGACGTCAGTGCAGGATTTGAC
rJMCP002G08+ ATATATTCAGAGGAGTCGTGGATTAAGTAACGTACAAGTGACGTCAGTGCAGGATTTGAC
____________________________________________________________
consensus ATATATTCAGAGGAGTCGTGGATTAAGTAACGTACAAGTGACGTCAGTGCAGGATTTGAC
. : . : . : . : . : . :
rJMFF019L07- GTGCCAAATGTTCTCAAAGGTACAGTCCTGAGAGCAACCTTATTGAGCCAATCTTTCTGC
rJMFF022J06- GTGCCAAATGTTCTCAAAGGTACAGTCCTGAGAGCAACCTTATTGAGCCAATCTTTCTGC
rJMCP017G04+ GTGCCAAATGTTCTCAAAGGTACAGTCCTGAGAGCAACCTTATTGAGCCAATCTTTCTGC
rJMCP004F03+ GTGCCAAATGTTCTCAAAGGTACAGTCCTGAGAGCAACCTTATTGAGCCAATCTTTCTGC
JMCP010E09+ GTGCCAAATGTTCTCAAAGGTACAGTCCTGAGAGCAACCTTATTGAGCCAATCTTTCTGC
rJMCP002G08+ GTGCCAAATGTTCTCAAAGGTACAGTCCTGAGAGCAACCTTATTGAGCCAATCTTagaGC
____________________________________________________________
consensus GTGCCAAATGTTCTCAAAGGTACAGTCCTGAGAGCAACCTTATTGAGCCAATCTTTCTGC
. : . : . : . : . : . :
rJMFF019L07- ATGAGGCCATCCGTTATCTCGGATTTGAAGAGCCCTGGCGATATGGAGTTCACTCTTATC
rJMFF022J06- ATGAGGCCATCCGTTATCTCGGATTTGAAGAGCCCTGGCGATATGGAGTTCACTCTTATC
rJMCP017G04+ ATGAGGCCATCCGTTATCTCGGATTTGAAGAGCCCTGGCGATATGGAGTTCACTCTTATC
rJMCP004F03+ ATGAGGCCATCCGTTATCTCGGATTTGAAGAGCCCTGGCGATATGGAGTTCACTCTTATC
JMCP010E09+ ATGAGGCCATCCGTTATCTCGGATTTGAAGAGCCgacGCGATATGGAGTTCACTCTTATC
rJMCP002G08+ ATGAGGCCATCCGTTATCagcGATTTGAAGAGCCCTGGCGATATGGAGTTCACTCTTATC
JMFN030A19+ CCTGGCGATATGGAGTTCACTCTTATC
JMFN041A22+ TTGAAGAGCCCTGGCGAGATGGAGTTCACTTTTATC
____________________________________________________________
consensus ATGAGGCCATCCGTTATCTCGGATTTGAAGAGCCCTGGCGATATGGAGTTCACTCTTATC
. : . : . : . : . : . :
rJMFF019L07- TTGTTTGTTCCTAATTCAAGTGCCATCACCCTTGTGAGTGCGTTAACAGCAGTCTTTGAA
rJMFF022J06- TTGTTTGTTCCTAATTCAAGTGCCATCACCCTTGTGAGTGCGTTAACAGCAGTCTTTGAA
rJMCP017G04+ TTGTTTGTTCCTAATTCAAGTGCCATCACCCTTGTGAGTGCGTTAACAGCAGTCTTTGAA
rJMCP004F03+ TTGTTTGTTCCTAATTCAAGTGCCATCACCCTTGTGAGTGCGTTAACAGCAGTCTTTGAA
JMCP010E09+ TTGTTTGTTCCTAATTCAAGTGCCATCACCCTTGTGAGTGCGTTAACAGCAGTCTTTGAA
rJMCP002G08+ TTGTTTGTTgCTAATTCAAGTGCCATCACCCTTGTGAGTGCGTTAACAGCAGTCTTacAA
JMFN030A19+ TGGTTTGTTCNTAATTCAAGTGCCATCACCCTTGTGAGTGCGTTAACAGCAGTCTNTGAA
JMFN041A22+ TTGTTTGCTCCCAATTCAAGTGCCATCACCCTTGTGAGTGCATTAACAGCAGTCTTTGAA
____________________________________________________________
consensus TTGTTTGTTCCTAATTCAAGTGCCATCACCCTTGTGAGTGCGTTAACAGCAGTCTTTGAA
. : . : . : . : . : . :
rJMFF019L07- GTAGTATAGGCAAGGCCTCCTGGCAACTGCCCACGGTTAAGTCCAGAAATGGAAGAGATG
rJMFF022J06- GTAGTATAGGCAAGGCCTCCTGGCAACTGCCCACGGTTAAGTCCAGAAATGGAAGAGATG
rJMCP017G04+ GTAGTATAGGCAAGGCCTCCTGGCAACTGCCCACGGTTAAGTCCAGAAATGGAAGAGATG
rJMCP004F03+ GTAGTATAGGCAAGGCCTCCTGGCAACTGCCCACGGTTAAGTCCAGAAATGGAAGAGATG
JMCP010E09+ GTAGTATAGGCAAGGCCTCCTGGCAACTGCCCACGGTTAAGTCCAGAAATGGAAGAGATG
rJMCP002G08+ GTAGTATAGGCAAGGCCTCCTGGCAACTGCCCACGGTTAAGTCCAGAAATGGAAGAGATG
JMFN030A19+ GTAGTATAGGCAAGGCCTCCTGGCAACTGCCCACGGTTAAGTCCAGAAATGGAAGAGATG
JMFN041A22+ GTAGCGTAGGCAAGGCCTCCTGGAGCCGGCGCACGGTTAAGCCCAGAAATGGAAGAGATG
JMFF019L07+ CAACTGCCCACGGTTAAGTCCAGAAATGGAAGAGATG
JMFF022J06+ GTCCAGAAATGGAAGAGATG
____________________________________________________________
consensus GTAGTATAGGCAAGGCCTCCTGGCAACTGCCCACGGTTAAGTCCAGAAATGGAAGAGATG
. : . : . : . : . : . :
rJMFF019L07- TTGACGATAGATCCTCCAAACTTAGCGTTACACATGCGCAAGCAAACATATTTCGAGACC
rJMFF022J06- TTGACGATAGATCCTCCAAACTTAGCGTTACACATGCGCAAGCAAACATATTTCGAGACC
rJMCP017G04+ TTGACGATAGATCCTCCAAACTTAGCGTTACACATGCGCAAGCAAACATATTTCGAGACC
rJMCP004F03+ TTGACGATAGATCCTCCAAACTTAGCGTTACACATGCGCAAGCAAACATATTTCGAGACC
JMCP010E09+ CTGACGATAGATCCTCCAAACTTAGCGTTACACATGCGCAAGCAAACATATTTCGAGACC
rJMCP002G08+ TTGACGATAGATCCTCCAAAgTTAGCGTTACACATcgcCAAGCAAACATATTTCGAGACC
JMFN030A19+ TTGACGATAGATCCTCCAAACTTAGCGTTACACATGCGCAAGCAAACATATTTCGAGACC
JMFN041A22+ TTGACGATAGATCATTCGAGTTTAGCGTTACACATGCGCAAGCAAACATATTTCGAGACC
JMFF019L07+ TTGACGATAGATCCTCCAAACTTAGCGTTACACATGCGCAAGCAAACATATTTCGAGACC
JMFF022J06+ TTGACGATAGATCCTCCAAACTTAGCGTTACACATGCGCAAGCAAACATATTTCGAGACC
____________________________________________________________
consensus TTGACGATAGATCCTCCAAACTTAGCGTTACACATGCGCAAGCAAACATATTTCGAGACC
. : . : . : . : . : . :
rJMFF019L07- AACCATGTGCCAG
rJMFF022J06- AACCATGTGCCAGTTAGGTTTGTTTTTGTGAGATCATTCCACTCTTCCTCTGTTAGATCC
rJMCP017G04+ AACCATGTGCCAGTTAGGTTTGTTTTTGTGAGATCATTCCACTCTTCCTCTGTTAGATCC
rJMCP004F03+ AACCATGTGCCAGTTAGGTTTGTTTTTGTGAGATCATTCCACTCTTCCTCTGTTAGATCC
JMCP010E09+ AACCATGTGCCAGTTAGGTTacaaaaaGTGAGATCATTCCACTCTTCCTCTGTTAGATCC
rJMCP002G08+ AACCATGTGCCAGTTAGGTTTGTTTTTGTGAGATCATTCCACTCTTCCTCTGTTAGATCC
JMFN030A19+ AACCATGTGCCAGTTAGGTTTGTTTTTGTGAGATCATTCCACTCTTCCTCTGTTAGATCC
JMFN041A22+ AACCATGTGCCAGTTAGGTTTGTTTTTGTGAGATCATTCCACTCTTCCTCTGTTAGATCC
JMFF019L07+ AACCATGTGCCAGTTAGGTTTGTTTTTGTGAGATCATTCCACTCTTCCTCTGTTAGATCC
JMFF022J06+ AACCATGTGCCAGTTAGGTTTGTTTTTGTGAGATCATTCCACTCTTCCTCTGTTAGATCC
____________________________________________________________
consensus AACCATGTGCCAGTTAGGTTTGTTTTTGTGAGATCATTCCACTCTTCCTCTGTTAGATCC
. : . : . : . : . : . :
rJMFF022J06- NATGGGAGTGTGTACTCGACCTCTAACGC
rJMCP017G04+ AAT-GGAGTGTGTACTCGACCTCTAACGCCGGCATTGTTAATCAGTGCGTCGATCCGCCC
rJMCP004F03+ AAT-GGAGTGTGTACTCGACCTCTAACGCCGGCATTGTTAATCAGTGCGTCGATCCGCCC
JMCP010E09+ AAT-GGAGTGTGTACTCGACCTCTAACGCCGGCATTGTTAATCAGTGCGTCGATCCGCCC
rJMCP002G08+ AAT-GGAGTGTGTACTCGACCTCTAACGCCGGCATTGTTAATCAGTGCGTCGATCCGCCC
JMFN030A19+ AAT-GGAGTGTGTACTCGACCTCTAACGCCGGCATTGTTAATCAGTGCGTCGATCCGCCC
JMFN041A22+ AAT-GGAGTGTGTACTCGACCTCTAACGCCGGCATTGTTAATCAGTGCGTCGATCCGCCC
JMFF019L07+ AAT-GGAGTGTGTACTCGACCTCTAACGCCGGCATTGTTAATCAGTGCGTCGATCCGCCC
JMFF022J06+ AAT-GGAGTGTGTACTCGACCTCTAACGCCGGCATTGTTAATCAGTGCGTCGATCCGCCC
____________________________________________________________
consensus AAT-GGAGTGTGTACTCGACCTCTAACGCCGGCATTGTTAATCAGTGCGTCGATCCGCCC
. : . : . : . : . : . :
rJMCP017G04+ AAATGCATCCCAAGCCCTCTGAACGGCCGCCTCAATGGCCGGACCATCAGCACTAACGTC
rJMCP004F03+ AAATGCATCCCAAGCCCTCTGAACGGCCGCCTCAATGGCCGGACCATCAGCACTAACGTC
JMCP010E09+ AAATGCATCCCAAGCCCTCTGAACGGCCGCCTCAATGGCCGGACCATCAGCACTAACGTC
rJMCP002G08+ AAATGCATCCCAAGCCCTCTGAACGGCCGCCTCAATGGCCGGACCATCAGCACTAACGTC
JMFN030A19+ AAATGCATCCCAAGCCCTCTGAACGGCCGCCTCAATGGCCGGACCATCAGCACTAACGTC
JMFN041A22+ AAACGCGTCCCAAGCCCTCTGAACGGCCGCCTCAATGGCCGGACCATCCGCGCTAACGTC
JMFF019L07+ AAATGCATCCCAAGCCCTCTGAACGGCCGCCTCAATGGCCGGACCATCAGCACTAACGTC
JMFF022J06+ AAATGCATCCCAAGCCCTCTGAACGGCCGCCTCAATGGCCGGACCATCAGCACTAACGTC
____________________________________________________________
consensus AAATGCATCCCAAGCCCTCTGAACGGCCGCCTCAATGGCCGGACCATCAGCACTAACGTC
. : . : . : . : . : . :
rJMCP017G04+ GAGCTC
rJMCP004F03+ GAGCTC
JMCP010E09+ GAGCTC
rJMCP002G08+ GAGCTCAATGGCCACa
JMFN030A19+ GAGCTCAATGGCCACTGCTCGGAGCGGCGT---------------GCCGGAACCGACTCC
JMFN041A22+ GAGCTCAATGGCCACCGCTCGGAGCGGCGTACCGGAGCTCGACTCGCCGGAACCGACTCC
JMFF019L07+ GAGCTCAATGGCCACTGCTCGGAGCGGCGT---------------GCCGGAACCGACTCC
JMFF022J06+ GAGCTCAATGGCCACTGCTCGGAGCGGCGT---------------GCCGGAACCGACTCC
____________________________________________________________
consensus GAGCTCAATGGCCACTGCTCGGAGCGGCGT---------------GCCGGAACCGACTCC
. : . : . : . : . : . :
JMFN030A19+ ATTGATCTCGTCGCAGAGCGACTTGAGCCGGTCGACACGGCGCGCGGCGGCGATGACTCT
JMFN041A22+ ATTGATCTCGTCGCAGAGCAACTTGAGCCGGTCGACACGGCGCGCGGCGGCGATGACTCT
JMFF019L07+ ATTGATCTCGTCGCAGAGCGACTTGAGCCGGTCGACACGGCGCGCGGCGGCGATGACTCT
JMFF022J06+ ATTGATCTCGTCGCAGAGCGACTTGAGCCGGTCGACACGGCGCGCGGCGGCGATGACTCT
____________________________________________________________
consensus ATTGATCTCGTCGCAGAGCGACTTGAGCCGGTCGACACGGCGCGCGGCGGCGATGACTCT
. : . : . : . : . : . :
JMFN030A19+ GCAGCCGGCCTTGGCCAAGTCGAGGCTGATCTCTCGGCCGATCCCCGACGACGCTCCGGT
JMFN041A22+ GCAGCCGGCCTTGGCCAAGTCGAGGCTGATCTCTCGGCCGATTCCCGACGACGCTCCGGT
JMFF019L07+ GCAGCCGGCCTTGGCCAAGTCGAGGCTGATCTCTCGGCCGATCCCCGACGACGCTCCGGT
JMFF022J06+ GCAGCCGGCCTTGGCCAAGTCGAGGCTGATCTCTCGGCCGATCCCCGACGACGCTCCGGT
____________________________________________________________
consensus GCAGCCGGCCTTGGCCAAGTCGAGGCTGATCTCTCGGCCGATCCCCGACGACGCTCCGGT
. : . : . : . : . : . :
JMFN030A19+ CACCATCGCCACCTTGCCGGTAAGTTCCCGCCATGGCTCCAGGTGGCG
JMFN041A22+ CACCATCGCCACCTTTCCGGTAAGGTCACGCCACGGCTCCAGGTGGCGCGCCACTTTCAC
JMFF019L07+ CACCATCGCCACCTTGCCGGTAAGTTCCCGCCATGGCTCCAGGTGGCGCGCCACTTTCAC
JMFF022J06+ CACCATCGCCACCTTGCCGGTAAGTTCCCGCCATGGCTCCAGGTGGCGCGCCACTTTCAC
____________________________________________________________
consensus CACCATCGCCACCTTGCCGGTAAGTTCCCGCCATGGCTCCAGGTGGCGCGCCACTTTCAC
. : . : . : . : . : . :
JMFF019L07+ ACGGCTCTCCATTTCGCTTT
JMFF022J06+ ACGGCTCTCCATTTCGCTTTGCGGTAAGAGGGAGAAGCAGAGGCATTTATAGGTCACGGG
____________________________________________________________
consensus ACGGCTCTCCATTTCGCTTTGCGGTAAGAGGGAGAAGCAGAGGCATTTATAGGTCACGGG