Contig 005965:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008M01Sequence495005965 (9)ref|XP_009780936.1|5e-81PREDICTED: glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic-like [Nico654002581 (9)ref|XP_002540513.1|6e-89glyceraldehyde 3-phosphate dehydrogenase, putative [Ricinus communis] gb|EEF2187
JMFF022A03Sequence472005965 (9)ref|XP_009780936.1|8e-67PREDICTED: glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic-like [Nico771002581 (9)ref|XP_011034836.1|5e-107PREDICTED: glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic isoform X1
JMFF024H10Sequence560005965 (9)ref|XP_009780936.1|3e-81PREDICTED: glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic-like [Nico757002581 (9)ref|XP_011034836.1|1e-111PREDICTED: glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic isoform X1
JMSF002P10Sequence270005965 (9)ref|XP_009780936.1|1e-26PREDICTED: glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic-like [Nico747002581 (9)ref|XP_011034836.1|2e-105PREDICTED: glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic isoform X1
JMSF008L11Sequence377005965 (9)ref|XP_009780936.1|3e-53PREDICTED: glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic-like [Nico761002581 (9)ref|XP_011034836.1|1e-89PREDICTED: glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic isoform X1
JMSF010P24Sequence263005965 (9)ref|XP_009780936.1|3e-25PREDICTED: glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic-like [Nico
JMSF021N16Sequence636005965 (9)ref|XP_009780936.1|7e-115PREDICTED: glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic-like [Nico752002581 (9)ref|XP_011034836.1|9e-118PREDICTED: glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic isoform X1
JMSF034G15Sequence673005965 (9)ref|XP_009780936.1|1e-124PREDICTED: glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic-like [Nico751002581 (9)ref|XP_011034836.1|2e-117PREDICTED: glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic isoform X1
JMSF038B20Sequence661005965 (9)ref|XP_009780936.1|9e-125PREDICTED: glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic-like [Nico833002581 (9)ref|XP_011034836.1|1e-107PREDICTED: glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic isoform X1

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF038B20+ TACGCCAACAACATAGGTTGGAATATCAGCCCCTTTTGCTGGGGCAGTGATGATA
JMSF034G15+ CCAACAACATAGGTTGGAATATCAGCCCCTTTTGCTGGGGCAGTGATGATA
JMSF021N16+ GCAGTGATGATA
                      ____________________________________________________________
consensus TACGCCAACAACATAGGTTGGAATATCAGCCCCTTTTGCTGGGGCAGTGATGATA
 
. : . : . : . : . : . :
JMSF038B20+ ACTTTCTTTGCACCAGCTTGTATGTGCTTTCCAGCACCCGGACCATCCACAAACACTCCT
JMSF034G15+ ACTTTCTTTGCACCAGCTTGTATGTGCTTTCCAGCACCCGGACCATCCACAAACACTCCT
JMFF024H10+ CT
JMSF021N16+ ACTTTCTTTGCACCAGCTTGTATGTGCTTTCCAGCACCCGGACCATCCACAAACACTCCT
                      ____________________________________________________________
consensus ACTTTCTTTGCACCAGCTTGTATGTGCTTTCCAGCACCCGGACCATCCACAAACACTCCT
 
. : . : . : . : . : . :
JMSF038B20+ GTTCCCTCAATAACAATGTCAATACCCATATCAGCCCAGGGAAGCTTGAGAGGAT-CCCT
JMSF034G15+ GTTCCCTCAATAACAATGTCAATACCCATATCAGCCCAGGGAAGCTTGAGAGGAT-CCCT
JMFF024H10+ GTTCCCTCAATAACAATGTCAATACCCATATCAGCCCAGGGAAGCTTGAGAGGATCCCCT
JMSF021N16+ GTTCCCTCAATAACAATGTCAATACCCATATCAGCCCAGGGAAGCTTGAGAGGAT-CCCT
                      ____________________________________________________________
consensus GTTCCCTCAATAACAATGTCAATACCCATATCAGCCCAGGGAAGCTTGAGAGGAT-CCCT
 
. : . : . : . : . : . :
JMSF038B20+ GTTGGAGACAACCTTAATGGGCTTCCCATCAACAGAGATGGTCTCATTGTCCACTACCTT
JMSF034G15+ GTTGGAGACAACCTTAATGGGCTTCCCATCAACAGAGATGGTCTCATTGTCCACTACCTT
JMFF024H10+ GTTGGAGACAACCTTAATGGGCTTCCCATCAACAGAGATGGTCTCATTGTCCACTACCTT
JMFF008M01+ TGGAGACAACCTTAATGGGCTTCCCATCAACAGAGATGGTCTCATTGTCCACTACCTT
JMSF021N16+ GTTGGAGACAACCTTAATGGGCTTCCCATCAACAGAGATGGTCTCATTGTCCACTACCTT
                      ____________________________________________________________
consensus GTTGGAGACAACCTTAATGGGCTTCCCATCAACAGAGATGGTCTCATTGTCCACTACCTT
 
. : . : . : . : . : . :
JMSF038B20+ CACATCTGCCTTGAAAGTTCCCAGCATGGAATCATACTTGAGCAAGTGAGCCGCATTCTT
JMSF034G15+ CACATCTGCCTTGAAAGTTCCCAGCATGGAATCATACTTGAGCAAGTGAGCCGCATTCTT
JMFF024H10+ CACATCTGCCTTGAAAGTTCCCAGCATGGAATCATACTTGAGCAAGTGAGCCGCATTCTT
JMFF008M01+ CACATCTGCCTTGAAAGTTCCCAGCATGGAATCATACTTGAGCAAGTGAGCCGCATTCTT
JMSF021N16+ CACATCTGCCTTGAAAGTTCCCAGCATGGAATCATACTTGAGCAAGTGAGCCGCATTCTT
JMFF022A03+ CCTTGAAAGTTCCCAGCATGGAATCATACTTGAGCAAGTGAGCCGCATTCTT
                      ____________________________________________________________
consensus CACATCTGCCTTGAAAGTTCCCAGCATGGAATCATACTTGAGCAAGTGAGCCGCATTCTT
 
. : . : . : . : . : . :
JMSF038B20+ GACACCAGCACTGTCATTGACAACAATAACTTCCAATGGCGAATCCTTGCGCCCGTGCCA
JMSF034G15+ GACACCAGCACTGTCATTGACAACAATAACTTCCAATGGCGAATCCTTGCGCCCGTGCCA
JMFF024H10+ GACACCAGCACTGTCATTGACAACAATAACTTCCAATGGCGAATCCTTGCGCCCGTGCCA
JMFF008M01+ GACACCAGCACTGTCATTGACAACAATAACTTCCAATGGCGAATCCTTGCGCCCGTGCCA
JMSF008L11+ ACCAGCACTGTCATTGACAACAATAACTTCCAATGGCGAATCCTTGCGCCCGTGCCA
JMSF021N16+ GACACCAGCACTGTCATTGACAACAATAACTTCCAATGGCGAATCCTTGCGCCCGTGCCA
JMFF022A03+ GACACCAGCACTGTCATTGACAACAATAACTTCCAATGGCGAATCCTTGCGCCCGTGCCA
                      ____________________________________________________________
consensus GACACCAGCACTGTCATTGACAACAATAACTTCCAATGGCGAATCCTTGCGCCCGTGCCA
 
. : . : . : . : . : . :
JMSF038B20+ GCAGCGCAGGAAGTTTCTACCAATGCGCCCAAAACCATTGATTGCAACCTTCAATTTGGC
JMSF034G15+ GCAGCGCAGGAAGTTTCTACCAATGCGCCCAAAACCATTGATTGCAACCTTCAATTTGGC
JMFF024H10+ GCAGCGCAGGAAGTTTCTACCAATGCGCCCAAAACCATTGATTGCAACCTTCAATTTGGC
JMSF010P24+ TTGGC
JMFF008M01+ GCAGCGCAGGAAGTTTCTACCAATGCGCCCAAAACCATTGATTGCAACCTTCAATTTGGC
JMSF008L11+ GCAGCGCAGGAAGTTTCTACCAATGCGCCCAAAACCATTGATTGCAACCTTCAATTTGGC
JMSF021N16+ GCAGCGCAGGAAGTTTCTACCAATGCGCCCAAAACCATTGATTGCAACCTTCAATTTGGC
JMSF002P10+ TCAATTTGGC
JMFF022A03+ GCAGCGCAGGAAGTTTCTACCAATGCGCCCAAAACCATTGATTGCAACCTTCAATTTGGC
                      ____________________________________________________________
consensus GCAGCGCAGGAAGTTTCTACCAATGCGCCCAAAACCATTGATTGCAACCTTCAATTTGGC
 
. : . : . : . : . : . :
JMSF038B20+ AACAGTGACCCCCTTAACTGGGGCTCCTGTAGCTTTGGGAGTGAGTTGGGCAGCCACAAC
JMSF034G15+ AACAGTGACCCCCTTAACTGGGGCTCCTGTAGCTTTGGGAGTGAGTTGGGCAGCCACAAC
JMFF024H10+ AACAGTGACCCCCTTAACTGGGGCTCCTGTAGCTTTGGGAGTGAGTTGGGCAGCCACAAC
JMSF010P24+ AACAGTGACCCCCTTAACTGGGGCTCCTGTAGCTTTGGGAGTGAGTTGGGCAGCCACAAC
JMFF008M01+ AACAGTGACCCCCTTAACTGGGGCTCCTGTAGCTTTGGGAGTGAGTTGGGCAGCCACAAC
JMSF008L11+ AACAGTGACCCCCTTAACTGGGGCTCCTGTAGCTTTGGGAGTGAGTTGGGCAGCCACAAC
JMSF021N16+ AACAGTGACCCCCTTAACTGGGGCTCCTGTAGCTTTGGGAGTGAGTTGGGCAGCCACAAC
JMSF002P10+ AACAGTGACCCCCTTAACTGGGGCTCCTGTAGCTTTGGGAGTGAGTTGGGCAGCCACAAC
JMFF022A03+ AACAGTGACCCCCTTAACTGGGGCTCCTGTAGCTTTGGGAGTGAGTTGGGCAGCCACAAC
                      ____________________________________________________________
consensus AACAGTGACCCCCTTAACTGGGGCTCCTGTAGCTTTGGGAGTGAGTTGGGCAGCCACAAC
 
. : . : . : . : . : . :
JMSF038B20+ ATCAGAGAAGGAAGCTTCCCTGTTAGAAAACGTAACACATCCACTTGAACGCAGACCAGA
JMSF034G15+ ATCAGAGAAGGAAGCTTCCCTGTTAGAAAACGTAACACATCCACTTGAACGCAGACCAGA
JMFF024H10+ ATCAGAGAAGGAAGCTTCCCTGTTAGAAAACGTAACACATCCACTTGAACGCAGACCAGA
JMSF010P24+ ATCAGAGAAGGAAGCTTCCCTGTTAGAAAACGTAACACATCCACTTGAACGCAGACCAGA
JMFF008M01+ ATCAGAGAAGGAAGCTTCCCTGTTAGAAAACGTAACACATCCACTTGAACGCAGACCAGA
JMSF008L11+ ATCAGAGAAGGAAGCTTCCCTGTTAGAAAACGTAACACATCCACTTGAACGCAGACCAGA
JMSF021N16+ ATCAGAGAAGGAAGCTTCCCTGTTAGAAAACGTAACACATCCACTTGAACGCAGACCAGA
JMSF002P10+ ATCAGAGAAGGAAGCTTCCCTGTTAGAAAACGTAACACATCCACTTGAACGCAGACCAGA
JMFF022A03+ ATCAGAGAAGGAAGCTTCCCTGTTAGAAAACGTAACACATCCACTTGAACGCAGACCAGA
                      ____________________________________________________________
consensus ATCAGAGAAGGAAGCTTCCCTGTTAGAAAACGTAACACATCCACTTGAACGCAGACCAGA
 
. : . : . : . : . : . :
JMSF038B20+ GAACTCAGCCACTTCTAGCCTCTTGGAGAAGCATTGAGGAGTGGAGGTCTTGGAGGGAAG
JMSF034G15+ GAACTCAGCCACTTCTAGCCTCTTGGAGAAGCATTGAGGAGTGGAGGTCTTGGAGGGAAG
JMFF024H10+ GAACTCAGCCACTTCTAGCCTCTTGGAGAAGCATTGAGGAGTGGAGGTCTTGGAGGGAAG
JMSF010P24+ GAACTCAGCCACTTCTAGCCTCTTGGAGAAGCATTGAGGAGTGGAGGTCTTGGAGGGAAG
JMFF008M01+ GAACTCAGCCACTTCTAGCCTCTTGGAGAAGCATTGAGGAGTGGAGGTCTTGGAGGGAAG
JMSF008L11+ GAACTCAGCCACTTCTAGCCTCTTGGAGAAGCATTGAGGAGTGGAGGTCTTGGAGGGAAG
JMSF021N16+ GAACTCAGCCACTTCTAGCCTCTTGGAGAAGCATTGAGGAGTGGAGGTCTTGGAGGGAAG
JMSF002P10+ GAACTCAGCCACTTCTAGCCTCTTGGAGAAGCATTGAGGAGTGGAGGTCTTGGAGGGAAG
JMFF022A03+ GAACTCAGCCACTTCTAGCCTCTTGGAGAAGCATTGAGGAGTGGAGGTCTTGGAGGGAAG
                      ____________________________________________________________
consensus GAACTCAGCCACTTCTAGCCTCTTGGAGAAGCATTGAGGAGTGGAGGTCTTGGAGGGAAG
 
. : . : . : . : . : . :
JMSF038B20+ CCTGGTTCGGGTTGGGATTCTTGAATAAACTAGAGCTGCATGGGAAGCCATGGCTGCAAC
JMSF034G15+ CCTGGTTCGGGTTGGGATTCTTGAATAAACTAGAGCTGCATGGGAAGCCATGGCTGCAAC
JMFF024H10+ CCTGGTTCGGGTTGGGATTCTTGAATAAACTAGAGCTGCATGGGAAGCCATGGCTGCAAC
JMSF010P24+ CCTGGTTCGGGTTGGGATTCTTGAATAAACTAGAGCTGCATGGGAAGCCATGGCTGCAAC
JMFF008M01+ CCTGGTTCGGGTTGGGATTCTTGAATAAACTAGAGCTGCATGGGAAGCCATGGCTGCAAC
JMSF008L11+ CCTGGTTCGGGTTGGGATTCTTGAATAAACTAGAGCTGCATGGGAAGCCATGGCTGCAAC
JMSF021N16+ CCTGGTTCGGGTTGGGATTCTTGAATAAACTAGAGCTGCATGGGAAGCCATGGCTGCAAC
JMSF002P10+ CCTGGTTCGGGTTGGGATTCTTGAATAAACTAGAGCTGCATGGGAAGCCATGGCTGCAAC
JMFF022A03+ CCTGGTTCGGGTTGGGATTCTTGAATAAACTAGAGCTGCATGGGAAGCCATGGCTGCAAC
                      ____________________________________________________________
consensus CCTGGTTCGGGTTGGGATTCTTGAATAAACTAGAGCTGCATGGGAAGCCATGGCTGCAAC
 
. : . : . : . : . : . :
JMSF038B20+ TGC
JMSF034G15+ TGCAACAACTTCAGGACC
JMFF024H10+ TGCAACAACTTCAGGACC
JMSF010P24+ TGCAACAACTTCAGG
JMFF008M01+ TGCAACAACTTCAGGAC
JMSF008L11+ TGCAACAACTTCAGGACC
JMSF021N16+ TGCAACAACTTCAGGACC
JMSF002P10+ TGCAACAACTTCAGGACC
JMFF022A03+ TGCAACAACTTCAGGACCAACTTACAAATCCTGATTTCCCAGTTATTTATACTACATTTC
                      ____________________________________________________________
consensus TGCAACAACTTCAGGACCAACTTACAAATCCTGATTTCCCAGTTATTTATACTACATTTC