Contig 005962:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020N03Sequence251005962 (3)
JMFF023N19Sequence409005962 (3)ref|XP_009759222.1|51.2PREDICTED: uncharacterized protein LOC104211794 [Nicotiana sylvestris]689011065 (3)ref|XP_011098555.1|287PREDICTED: uncharacterized protein LOC105177196 [Sesamum indicum]
JMSF012A12Sequence477005962 (3)ref|XP_009759222.1|83.6PREDICTED: uncharacterized protein LOC104211794 [Nicotiana sylvestris]758011065 (3)ref|XP_011098555.1|363PREDICTED: uncharacterized protein LOC105177196 [Sesamum indicum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF012A12+            TGAAAGAACATCCTGAACACTATAGAATTCATCATCACCATCAGAACCAACTCCTGTTT
                      ____________________________________________________________
consensus              TGAAAGAACATCCTGAACACTATAGAATTCATCATCACCATCAGAACCAACTCCTGTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF023N19+                   AACCACGATTCGTTGTTTCCTTGGAATGTCGGATTGCAATAAGACGAATTCG
JMSF012A12+           CCGGGTCAAACCACGATTCGTTGTTTCCTTGGAATGTCGGATTGCAATAAGACGAATTCG
                      ____________________________________________________________
consensus             CCGGGTCAAACCACGATTCGTTGTTTCCTTGGAATGTCGGATTGCAATAAGACGAATTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF023N19+           CGGAACCGGAAGGCTCCACTTTGCTGAGCTTATTGTTGGACAAAGAGCGGCCCCTTACCA
JMSF012A12+           CGGAACCGGAAGGCTCCACTTTGCTGAGCTTATTGTTGGACAAAGAGCGGCCCCTTACCA
                      ____________________________________________________________
consensus             CGGAACCGGAAGGCTCCACTTTGCTGAGCTTATTGTTGGACAAAGAGCGGCCCCTTACCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF023N19+           CCCTCCGCCGCCGCCGCCGCCGTGGCTTGCCAAGATTCAGGCAACCAAATCCCTCACAAC
JMSF012A12+           CCCTCCGCCGCCGCCGCCGCCGTGGCTTGCCAAGATTCAGGCAACCAAATCCCTCACAAC
JMFF020N03+                                                            TCCCTCACAAC
                      ____________________________________________________________
consensus             CCCTCCGCCGCCGCCGCCGCCGTGGCTTGCCAAGATTCAGGCAACCAAATCCCTCACAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF023N19+           CTCTCGGAGTCGACCCAGAAGCTCCCATTCTCCTCTATCTTCCACGACAGTGAAATTGAA
JMSF012A12+           CTCTCGGAGTCGACCCAGAAGCTCCCATTCTCCTCTATCTTCCACGACAGTGAAATTGAA
JMFF020N03+           CTCTCGGAGTCGACCCAGAAGCTCCCATTCTCCTCTATCTTCCACGACAGTGAAATTGAA
                      ____________________________________________________________
consensus             CTCTCGGAGTCGACCCAGAAGCTCCCATTCTCCTCTATCTTCCACGACAGTGAAATTGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF023N19+           TGATGGTGAGACTTGAGAGGGAGCTCTGGTGGATCAATCACTTATATAAGTGTAGTGGGA
JMSF012A12+           TGATGGTGAGACTTGAGAGGGAGCTCTGGTGGATCAATCACTTATATAAGTGTAGTGGGA
JMFF020N03+           TGATGGTGAGACTTGAGAGGGAGCTCTGGTGGATCAATCACTTATATAAGTGTAGTGGGA
                      ____________________________________________________________
consensus             TGATGGTGAGACTTGAGAGGGAGCTCTGGTGGATCAATCACTTATATAAGTGTAGTGGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF023N19+           AAGGGAAAGCCGCTTCTGGAACAGGAACAAACCACTAAGATCAAAACTNTGATTTCATCA
JMSF012A12+           AAGGGAAAGCCGCTTCTGGAACAGGAACAAACCACTAAGATCAAAACTATGATTTCATCA
JMFF020N03+           AAGGGAAAGCCGCTTCTGGAACAGGAACAAACCACTAAGATCAAAACTATGATTTCATCA
                      ____________________________________________________________
consensus             AAGGGAAAGCCGCTTCTGGAACAGGAACAAACCACTAAGATCAAAACTATGATTTCATCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF023N19+           TCTCATATCACATCATATCATATGAGATCGCAGAGGAAATTGCATCGAGGAACAAGC   
JMSF012A12+           TCTCATATCACATCATATCATATGAGATCGCAGAGGAAATTGCATCGAGGAACAAGC   
JMFF020N03+           TCTCATATCACATCATATCATATGAGATCGCAGAGGAAATTGCATCGAGGAACAAGCAAC
                      ____________________________________________________________
consensus             TCTCATATCACATCATATCATATGAGATCGCAGAGGAAATTGCATCGAGGAACAAGCAAC