Contig 005961:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS037A07+                                                   CCATGGTATGATAGGAAGGA
                      ____________________________________________________________
consensus                                                     CCATGGTATGATAGGAAGGA
 
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JMFS037A07+           GAATTTTTGGGAGACAATATGCTCCATACAAACAGGCCAGATTTTCTCTAGAGCATGATT
                      ____________________________________________________________
consensus             GAATTTTTGGGAGACAATATGCTCCATACAAACAGGCCAGATTTTCTCTAGAGCATGATT
 
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JMFS037A07+           CAACCATCTTACACTTTCTGAATCAGAAAGTACCCGTCTTTGATACGACTGCCTTTTTTC
                      ____________________________________________________________
consensus             CAACCATCTTACACTTTCTGAATCAGAAAGTACCCGTCTTTGATACGACTGCCTTTTTTC
 
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JMFS037A07+           CTCAAACTGCAATCTCCTCCTCAATCTAATCACATAGCTCTCATGAACCAAATATAGATA
JMFF020L24+                                                          CCAAATATAGATA
                      ____________________________________________________________
consensus             CTCAAACTGCAATCTCCTCCTCAATCTAATCACATAGCTCTCATGAACCAAATATAGATA
 
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JMFS037A07+           GACGAGAGAGACAAAGTAAGCAAAAGGATGGCAGTAATCGAAGGAATTGAGCAACCAAAG
JMFF049O21+                        AAGTAAGCAAAAGGATGGCAGTAATCGAAGGAA-TGAGCAACCAAAG
JMFF020L24+           GACGAGAGAGACAAAGTAAGCAAAAGGATGGCAGTAATCGAAGGAATTGAGCAACCAAAG
                      ____________________________________________________________
consensus             GACGAGAGAGACAAAGTAAGCAAAAGGATGGCAGTAATCGAAGGAATTGAGCAACCAAAG
 
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JMFS037A07+           AAGCAGCAACACTACGACCACATGATGTATCATTGTACCTTCTGTTATACTACTCACCAT
JMFF049O21+           AAGCAGCAACACTACGACCACATGATGTATCATTGTACCTTCTGTTATACTACTCACCAT
JMFF020L24+           AAGCAGCAACACTACGACCACATGATGTATCATTGTACCTTCTGTTATACTACTCACCAT
                      ____________________________________________________________
consensus             AAGCAGCAACACTACGACCACATGATGTATCATTGTACCTTCTGTTATACTACTCACCAT
 
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JMFS037A07+           TCTCGAAACTTATTTTCTATACATGTATGCAGTTTCTGACCCTAACCATATACCCGACCC
JMFF049O21+           TCTCGAAACTTATNTTCTATACATGTATGCAGTTTCTGACCCTAACCATATACCCGACCC
JMFF020L24+           TCTCGAAACTTATTTTCTATACATGTATGCAGTTTCTGACCCTAACCATATACCCGACCC
                      ____________________________________________________________
consensus             TCTCGAAACTTATTTTCTATACATGTATGCAGTTTCTGACCCTAACCATATACCCGACCC
 
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JMFS037A07+           GACCCTCGCAATTCGCAAGATATGGAGGATGCTTAACAAATTAAAATGCCCCGCCCTTCC
JMFF049O21+           GACCCTCGCAATTCGCAAGATATGGAGGATGCTTAACAAATTAAAATGCCCCGCCCTTCC
JMFF020L24+           GACCCTCGCAATTCGCAAGATATGGAGGATGCTTAACAAATTAAAATGCCCCGCCCTTCC
                      ____________________________________________________________
consensus             GACCCTCGCAATTCGCAAGATATGGAGGATGCTTAACAAATTAAAATGCCCCGCCCTTCC
 
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JMFS037A07+           ATACTGCTCCGTGTAAAACATTCATTGTTACGCACATCGGCTTTGATGAATTGGAGAAAA
JMFF049O21+           ATACTGCTCCGTGTAAAACATTCATTGTTACGCACATAGGCTTTGATGAATTGGAGAAAA
JMFF020L24+           ATACTGCTCCGTGTAAAACATTCATTGTTACGCACATAGGCTTTGATGAATTGGAGAAAA
                      ____________________________________________________________
consensus             ATACTGCTCCGTGTAAAACATTCATTGTTACGCACATAGGCTTTGATGAATTGGAGAAAA
 
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JMFS037A07+           GCCGAGCGGATAGAAAGTGGTATTGGATTGGATTTGTTTTTGGTCTTGGCTGCCGTGGAG
JMFF049O21+           GCCGAGCGGATAGAAAGTGGTATTGGATNGGATTTGTTTTTGGTCTTGGCTGCCGTGGAG
JMFF020L24+           GCCGAGCGGATAGAAAGTGGTATTGGATTGGATTTGTTTTTGGTCTTGGCTGCCGTGGAG
                      ____________________________________________________________
consensus             GCCGAGCGGATAGAAAGTGGTATTGGATTGGATTTGTTTTTGGTCTTGGCTGCCGTGGAG
 
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JMFS037A07+           CGGTGGCGGAGAGCGGAGAGACGTTTTATGAGTAGATCTTAAAGCTGTGA          
JMFF049O21+           CGGTGGCGGAGAGCGGAGAGACGTTTTATGAGTAGATCTTAAAGCTGTGAGGTTGGGGCT
JMFF020L24+           CGGTGGCGGAGAGCGGAGAGACGTTTTATGAGTAGATCTTAAAGCTGTGAGGTTGGGGCT
                      ____________________________________________________________
consensus             CGGTGGCGGAGAGCGGAGAGACGTTTTATGAGTAGATCTTAAAGCTGTGAGGTTGGGGCT
 
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JMFF049O21+           TTTCATGCTTTGACTCTCTCGTTTCTCCGGTTTCACCACGTGTTGACTTCATGCNGGATA
JMFF020L24+           TTTCATGCTTTGACTCTCTCGTTTCTCCGGTTTCACCACGTGTTGACTTCATGCTGGATA
                      ____________________________________________________________
consensus             TTTCATGCTTTGACTCTCTCGTTTCTCCGGTTTCACCACGTGTTGACTTCATGCTGGATA
 
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JMFF049O21+           CGTGTCTGGGAACGGAACAAGCCAGATTCTTACAATCAAACTAAAGCTAAGCCAGACAAC
JMFF020L24+           CGTGTCTGGGAACGGAACAAGCCAGATTCTTACAATCAAACTAAAGCTAAGCCAGACAAC
                      ____________________________________________________________
consensus             CGTGTCTGGGAACGGAACAAGCCAGATTCTTACAATCAAACTAAAGCTAAGCCAGACAAC