| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF020C01 | Sequence | 392 | 005958 (10) | 652 | 005958 (10) | gb|EYU29959.1| | 9e-46 | hypothetical protein MIMGU_mgv1a013696mg [Erythranthe guttata] | |||
| JMFF032J05 | Sequence | 602 | 005958 (10) | gb|EYU29959.1| | 5e-46 | hypothetical protein MIMGU_mgv1a013696mg [Erythranthe guttata] | 630 | 005958 (10) | gb|EYU29959.1| | 1e-45 | hypothetical protein MIMGU_mgv1a013696mg [Erythranthe guttata] |
| JMFF047B12 | Sequence | 647 | 005958 (10) | gb|EYU29959.1| | 7e-46 | hypothetical protein MIMGU_mgv1a013696mg [Erythranthe guttata] | 583 | 005958 (10) | ref|XP_006362559.1| | 2e-44 | PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Solanum tuberosum] |
| JMFN008L23 | Sequence | 617 | 005958 (10) | ref|XP_006362559.1| | 1e-45 | PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Solanum tuberosum] | |||||
| JMFN014D05 | Sequence | 534 | 005958 (10) | emb|CDY07374.1| | 4e-43 | BnaA07g24530D [Brassica napus] | |||||
| JMSF038M16 | Sequence | 674 | 005958 (10) | gb|EYU29959.1| | 1e-45 | hypothetical protein MIMGU_mgv1a013696mg [Erythranthe guttata] | 635 | 005958 (10) | gb|EYU29959.1| | 5e-46 | hypothetical protein MIMGU_mgv1a013696mg [Erythranthe guttata] |
This contig is upended
. : . : . : . : . : . :
rJMFF047B12- ACCCTGGAGAGTTTTTTTTTTTTTTTTGGAGCAAATTAAAATTAAAATTAAA
JMFN014D05+ GGAGCAAATTAAAATTAAAATTAAA
JMSF038M16+ TTTTTTTTTTGGAGCAAATTAAAATTAAAATTAAA
____________________________________________________________
consensus ACCCTGGAGAGTTTTTTTTTTTTTTTTGGAGCAAATTAAAATTAAAATTAAA
. : . : . : . : . : . :
rJMFF047B12- ATGAAACAAGATAGAGTATTGGTTATTGGGGGGAGATGAGAGCAGCAGGAATTACAAAAT
rJMSF038M16- AGATAGAGTATTGGTTATTGGGGGGAGATGAGAGCAGCAGGAATTACAAAAT
JMFN008L23+ CAAGATAGAGTATTGGTTATTGGGGGGAGATGAGAGCAGCAGGAATTACAAAAT
JMFF032J05+ GGGGGAGATGAGAGCAGCAGGAATTACAAAAT
rJMFF032J05- ATGAAACAAGATAGAGTATTGGTTATTGGGGGGAGATGAGAGCAGCAGGAATTACAAAAT
JMFN014D05+ ATGAAACAAGATAGAGTATTGGTTATTGGGGGGAGATGAGAGCAGCAGGAATTACAAAAT
JMSF038M16+ ATGAAACAAGATAGAGTATTGGTTATTGGGGGGAGATGAGAGCAGCAGGAATTACAAAAT
JMFF047B12+ ACAAGATAGAGTATTGGTTATTGGGGGGAGATGAGAGCAGCAGGAATTACAAAAT
rJMFF020C01- ATGAAACAAGATAGAGTATTGGTTATTGGGGGGAGATGAGAGCAGCAGGAATTACAAAAT
____________________________________________________________
consensus ATGAAACAAGATAGAGTATTGGTTATTGGGGGGAGATGAGAGCAGCAGGAATTACAAAAT
. : . : . : . : . : . :
rJMFF047B12- AATTAAATAGAATTAAGAGGAGATGTTGACACCACTTTGCTGCCACAAATTGATGATATC
rJMSF038M16- AATTAAATAGAATTAAGAGGAGATGTTGACACCACTTTGCTGCCACAAATTGATGATATC
JMFN008L23+ AATTAAATAGAATTAAGAGGAGATGTTGACACCACTTTGCTGCCACAAATTGATGATATC
JMFF032J05+ AATTAAATAGAATTAAGAGGAGATGTTGACACCACTTTGCTGCCACAAATTGATGATATC
rJMFF032J05- AATTAAATAGAATTAAGAGGAGATGTTGACACCACTTTGCTGCCACAAATTGATGATATC
JMFN014D05+ AATTAAATAGAATTAAGAGGAGATGTTGACACCACTTTGCTGCCACAAATTGATGATATC
JMSF038M16+ AATTAAATAGAATTAAGAGGAGATGTTGACACCACTTTGCTGCCACAAATTGATGATATC
JMFF047B12+ AATTAAATAGAATTAAGAGGAGATGTTGACACCACTTTGCTGCCACAAATTGATGATATC
rJMFF020C01- AATTAAATAGAATTAAGAGGAGATGTTGACACCACTTTGCTGCCACAAATTGATGATATC
____________________________________________________________
consensus AATTAAATAGAATTAAGAGGAGATGTTGACACCACTTTGCTGCCACAAATTGATGATATC
. : . : . : . : . : . :
rJMFF047B12- AGTGGCCTGATTGAGTAATATGATCATTTTCTTCTGGGATATCCAAGGCTTGCTCTCTAG
rJMSF038M16- AGTGGCCTGATTGAGTAATATGATCATTTTCTTCTGGGATATCCAAGGCTTGCTCTCTAG
JMFN008L23+ AGTGGCCTGATTGAGTAATATGATCATTTTCTTCTGGGATATCCAAGGCTTGCTCTCTAG
JMFF032J05+ AGTGGCCTGATTGAGTAATATGATCATTTTCTTCTGGGATATCCAAGGCTTGCTCTCTAG
rJMFF032J05- AGTGGCCTGATTGAGTAATATGATCATTTTCTTCTGGGATATCCAAGGCTTGCTCTCTAG
JMFN014D05+ AGTGGCCTGATTGAGTAATATGATCATTTTCTTCTGGGATATCCAAGGCTTGCTCTCTAG
JMSF038M16+ AGTGGCCTGATTGAGTAATATGATCATTTTCTTCTGGGATATCCAAGGCTTGCTCTCTAG
JMFF047B12+ AGTGGCCTGATTGAGTAATATGATCATTTTCTTCTGGGATATCCAAGGCTTGCTCTCTAG
rJMFF020C01- AGTGGCCTGATTGAGTAATATGATCATTTTCTTCTGGGATATCCAAGGCTTGCTCTCTAG
____________________________________________________________
consensus AGTGGCCTGATTGAGTAATATGATCATTTTCTTCTGGGATATCCAAGGCTTGCTCTCTAG
. : . : . : . : . : . :
rJMFF047B12- TGTGGTCTTCAGCTCTTCCCATGCATCTTTCCTTGGCCAAAAAAAGTATGGACTCAAAGG
rJMSF038M16- TGTGGTCTTCAGCTCTTCCCATGCATCTTTCCTTGGCCAAAAAAAGTATGGACTCAAAGG
JMFN008L23+ TGTGGTCTTCAGCTCTTCCCATGCATCTTTCCTTGGCCAAAAAAAGTATGGACTCAAAGG
JMFF032J05+ TGTGGTCTTCAGCTCTTCCCATGCATCTTTCCTTGGCCAAAAAAAGTATGGACTCAAAGG
rJMFF032J05- TGTGGTCTTCAGCTCTTCCCATGCATCTTTCCTTGGCCAAAAAAAGTATGGACTCAAAGG
JMFN014D05+ TGTGGTCTTCAGCTCTTCCCATGCATCTTTCCTTGGCCAAAAAAAGTATGGACTCAAAGG
JMSF038M16+ TGTGGTCTTCAGCTCTTCCCATGCATCTTTCCTTGGCCAAAAAAAGTATGGACTCAAAGG
JMFF047B12+ TGTGGTCTTCAGCTCTTCCCATGCATCTTTCCTTGGCCAAAAAAAGTATGGACTCAAAGG
rJMFF020C01- TGTGGTCTTCAGCTCTTCCCATGCATCTTTCCTTGGCCAAAAAAAGTATGGACTCAAAGG
____________________________________________________________
consensus TGTGGTCTTCAGCTCTTCCCATGCATCTTTCCTTGGCCAAAAAAAGTATGGACTCAAAGG
. : . : . : . : . : . :
rJMFF047B12- AACTGTACCGTGCCCTGCTATTTCTTGATCAAGTCCTAACCCTATGTTCTTTTCCATCCA
rJMSF038M16- AACTGTACCGTGCCCTGCTATTTCTTGATCAAGTCCTAACCCTATGTTCTTTTCCATCCA
JMFN008L23+ AACTGTACCGTGCCCTGCTATTTCTTGATCAAGTCCTAACCCTATGTTCTTTTCCATCCA
JMFF032J05+ AACTGTACCGTGCCCTGCTATTTCTTGATCAAGTCCTAACCCTATGTTCTTTTCCATCCA
rJMFF032J05- AACTGTACCGTGCCCTGCTATTTCTTGATCAAGTCCTAACCCTATGTTCTTTTCCATCCA
JMFN014D05+ AACTGTACCGTGCCCTGCTATTTCTTGATCAAGTCCTAACCCTATGTTCTTTTCCATCCA
JMSF038M16+ AACTGTACCGTGCCCTGCTATTTCTTGATCAAGTCCTAACCCTATGTTCTTTTCCATCCA
JMFF047B12+ AACTGTACCGTGCCCTGCTATTTCTTGATCAAGTCCTAACCCTATGTTCTTTTCCATCCA
rJMFF020C01- AACTGTACCGTGCCCTGCTATTTCTTGATCAAGTCCTAACCCTATGTTCTTTTCCATCCA
JMFF020C01+ TCAAGTCCTAACCCTATGTTCTTTTCCATCCA
____________________________________________________________
consensus AACTGTACCGTGCCCTGCTATTTCTTGATCAAGTCCTAACCCTATGTTCTTTTCCATCCA
. : . : . : . : . : . :
rJMFF047B12- CACGAACTTCAACACCAGTTTTGTCTTCCCCACCTTCTTCACCCCCGCTCCACTCTTCTG
rJMSF038M16- CACGAACTTCAACACCAGTTTTGTCTTCCCCACCTTCTTCACCCCCGCTCCACTCTTCTG
JMFN008L23+ CACGAACTTCAACACCAGTTTTGTCTTCCCCACCTTCTTCACCCCCGCTCCACTCTTCTG
JMFF032J05+ CACGAACTTCAACACCAGTTTTGTCTTCCCCACCTTCTTCACCCCCGCTCCACTCTTCTG
rJMFF032J05- CACGAACTTCAACACCAGTTTTGTCTTCCCCACCTTCTTCACCCCCGCTCCACTCTTCTG
JMFN014D05+ CACGAACTTCAACACCAGTTTTGTCTTCCCCACCTTCTTCACCCCCGCTCCACTCTTCTG
JMSF038M16+ CACGAACTTCAACACCAGTTTTGTCTTCCCCACCTTCTTCACCCCCGCTCCACTCTTCTG
JMFF047B12+ CACGAACTTCAACACCAGTTTTGTCTTCCCCACCTTCTTCACCCCCGCTCCACTCTTCTG
rJMFF020C01- CACGAACTTCAACACCAGTTTTGTCTTCCCCACCTTCTTCACCCCCGCTCCACTCTTCTG
JMFF020C01+ CACGAACTTCAACACCAGTTTTGTCTTCCCCACCTTCTTCACCCCCGCTCCACTCTTCTG
____________________________________________________________
consensus CACGAACTTCAACACCAGTTTTGTCTTCCCCACCTTCTTCACCCCCGCTCCACTCTTCTG
. : . : . : . : . : . :
rJMFF047B12- GGTGGGAGCCTCCAAAGCAGCCGTAGCTGCAATCTTGAAGTCTCTTCTAATGGGTGTGGT
rJMSF038M16- GGTGGGAGCCTCCAAAGCAGCCGTAGCTGCAATCTTGAAGTCTCTTCTAATGGGTGTGGT
JMFN008L23+ GGTGGGAGCCTCCAAAGCAGCCGTAGCTGCAATCTTGAAGTCTCTTCTAATGGGTGTGGT
JMFF032J05+ GGTGGGAGCCTCCAAAGCAGCCGTAGCTGCAATCTTGAAGTCTCTTCTAATGGGTGTGGT
rJMFF032J05- GGTGGGAGCCTCCAAAGCAGCCGTAGCTGCAATCTTGAAGTCTCTTCTAATGGGTGTGGT
JMFN014D05+ GGTGGGAGCCTCCAAAGCAGCCGTAGCTGCAATCTTGAAGTCTCTTCTAATGGGTGTGGT
JMSF038M16+ GGTGGGAGCCTCCAAAGCAGCCGTAGCTGCAATCTTGAAGTCTCTTCTAATGGGTGTGGT
JMFF047B12+ GGTGGGAGCCTCCAAAGCAGCCGTAGCTGCAATCTTGAAGTCTCTTCTAATGGGTGTGGT
rJMFF020C01- GGTGGGAGCCTCCAAAGCAGCCGTAGCTGCAATCTTGAAGTCTCTTCTAATGGGTGTGGT
JMFF020C01+ GGTGGGAGCCTCCAAAGCAGCCGTAGCTGCAATCTTGAAGTCTCTTCTAATGGGTGTGGT
____________________________________________________________
consensus GGTGGGAGCCTCCAAAGCAGCCGTAGCTGCAATCTTGAAGTCTCTTCTAATGGGTGTGGT
. : . : . : . : . : . :
rJMFF047B12- TTTGGCTTGAAGAATTATTGTTGCAGGAGCTCTGGGCTTTACAGAGAATGGTTTGTTGGA
rJMSF038M16- TTTGGCTTGAAGAATTATTGTTGCAGGAGCTCTGGGCTTTACAGAGAATGGTTTGTTGGA
JMFN008L23+ TTTGGCTTGAAGAATTATTGTTGCAGGAGCTCTGGGCTTTACAGAGAATGGTTTGTTGGA
JMFF032J05+ TTTGGCTTGAAGAATTATTGTTGCAGGAGCTCTGGGCTTTACAGAGAATGGTTTGTTGGA
rJMFF032J05- TTTGGCTTGAAGAATTATTGTTGCAGGAGCTCTGGGCTTTACAGAGAATGGTTTGTTGGA
JMFN014D05+ TTTGGCTTGAAGAATTATTGTTGCAGGAGCTCTGGGCTTTACAGAGAATGGTTTGTTGGA
JMSF038M16+ TTTGGCTTGAAGAATTATTGTTGCAGGAGCTCTGGGCTTTACAGAGAATGGTTTGTTGGA
JMFF047B12+ TTTGGCTTGAAGAATTATTGTTGCAGGAGCTCTGGGCTTTACAGAGAATGGTTTGTTGGA
rJMFF020C01- TTTGGCTTGAAGAATTATTGTTGCAGGAGCTCTGGGCTTTACAGAGAATGGTTTGTTGGA
JMFF020C01+ TTTGGCTTGAAGAATTATTGTTGCAGGAGCTCTGGGCTTTACAGAGAATGGTTTGTTGGA
____________________________________________________________
consensus TTTGGCTTGAAGAATTATTGTTGCAGGAGCTCTGGGCTTTACAGAGAATGGTTTGTTGGA
. : . : . : . : . : . :
rJMFF047B12- AAATAAAGAAGACGGGCAAGCGAAAGTTCCCTTTATGTTGGCTTGAACTGA
rJMSF038M16- AAATAAAGAAGACGGGCAAGCGAAAGTTCCCTTTATGTTGGCTTGAACTGACGACATTGA
JMFN008L23+ AAATAAAGAAGACGGGCAAGCGAAAGTTCCCTTTATGTTGGCTTGAACTGACGACATTGA
JMFF032J05+ AAATAAAGAAGACGGGCAAGCGAAAGTTCCCTTTATGTTGGCTTGAACTGACGACATTGA
rJMFF032J05- AAATAAAGAAGACGGGCAAGCGAAAGTTCCCTTTATGTTGGCTTGAACTGACGACATTGA
JMFN014D05+ AAATAAAGAAGACGGGCAAGCGAAAGTTC
JMSF038M16+ AAATAAAGAAGACGGGCAAGCGAAAGTTCCCTTTATGTTGGCTTGAACTGACGACATTGA
JMFF047B12+ AAATAAAGAAGACGGGCAAGCGAAAGTTCCCTTTATGTTGGCTTGAACTGACGACATTGA
rJMFF020C01- AAATAAAGAAGACGGGCAAGCGAAAGTTCCCTTTATGTTGGCTTGAACTGACGACATTGA
JMFF020C01+ AAATAAAGAAGACGGGCAAGCGAAAGTTCCCTTTATGTTGGCTTGAACTGACGACATTGA
____________________________________________________________
consensus AAATAAAGAAGACGGGCAAGCGAAAGTTCCCTTTATGTTGGCTTGAACTGACGACATTGA
. : . : . : . : . : . :
rJMSF038M16- TAACATGGTTAGTTTTCTCTGAGTCTGGAGATGGAGATTTTTGAATTCTATGTCGGAACG
JMFN008L23+ TAACATGGTTAGTTTTCTCTGAGTCTGGAGATGGAGATTTTTGAATTCTATGTCGGAACG
JMFF032J05+ TAACATGGTTAGTTTTCTCTGAGTCTGGAGATGGAGATTTTTGAATTCTATGTCGGAACG
rJMFF032J05- TAACATGGTTAGTTTTCTCTGAGTCTGGAGATGGAGATTTTTGAATTCTATGTCGGAACG
JMSF038M16+ TAACATGGTTAGTTTTCTCTGAGTCTGGAGATGGAGATTTTTGAATTCTATGTCGGAACG
JMFF047B12+ TAACATGGTTAGTTTTCTCTGAGTCTGGAGATGGAGATTTTTGAATTCTATGTCGGAACG
rJMFF020C01- TAACATGGTTAGTTTTCTCTGAGTCTGGAGATGGAGATTTTTGAATTCTATGTCGGAACG
JMFF020C01+ TAACATGGTTAGTTTTCTCTGAGTCTGGAGATGGAGATTTTTGAATTCTATGTCGGAACG
____________________________________________________________
consensus TAACATGGTTAGTTTTCTCTGAGTCTGGAGATGGAGATTTTTGAATTCTATGTCGGAACG
. : . : . : . : . : . :
rJMSF038M16- GAAGGTACAGTAGTTGGATTGCAGCGCAGCAGGTGGTT
JMFN008L23+ GAAGGTACAGTAGTTGGATTGCA
JMFF032J05+ GAAGGTACAGTAGTTGGATTGCAGCGCAGC
rJMFF032J05- GAAGGTACAGTAGTTGGATTGCAGCGCAGC
JMSF038M16+ GAAGGTACAGTAGTTGGATTGCAGCGCAGCAGGTGGTT
JMFF047B12+ GAAGGTACAGTAGTTGGATTGCAGCGCAGCAGGTGGTTGAGACTTGAGAGTT
rJMFF020C01- GAAGGTACAGTAGTTGGATTGCAGCGCAGCAGGTGGTTGAGACTTGAGAGTT
JMFF020C01+ GAAGGTACAGTAGTTGGATTGCAGCGCAGCAGGTGGTTGAGACTTGAGAGTTCGGTTCTC
____________________________________________________________
consensus GAAGGTACAGTAGTTGGATTGCAGCGCAGCAGGTGGTTGAGACTTGAGAGTTCGGTTCTC