Contig 005956:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019H16Sequence577005956 (4)ref|XP_009586886.1|2e-94PREDICTED: nudix hydrolase 14, chloroplastic [Nicotiana tomentosiformis]760005956 (4)ref|XP_009768771.1|4e-145PREDICTED: nudix hydrolase 14, chloroplastic [Nicotiana sylvestris]
JMSF031P15Sequence660005956 (4)ref|XP_009586886.1|2e-116PREDICTED: nudix hydrolase 14, chloroplastic [Nicotiana tomentosiformis]731005956 (4)ref|XP_009768771.1|2e-136PREDICTED: nudix hydrolase 14, chloroplastic [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF031P15- AACTGTTCTTTTATTAATTGTAATGGTAATAACTAGATTCC
rJMFF019H16- TTAATTGTAATGGTAATAACTAGATTCC
                      ____________________________________________________________
consensus AACTGTTCTTTTATTAATTGTAATGGTAATAACTAGATTCC
 
. : . : . : . : . : . :
rJMSF031P15- TATGACCAACATTAGGTCTACGATGCATAAACGAGGAATCATTCAGGTTCTCGAAGATGG
rJMFF019H16- TATGACCAACATTAGGTCTACGATGCATAAACGAGGAATCATTCAGGTTCTCGAAGATGG
                      ____________________________________________________________
consensus TATGACCAACATTAGGTCTACGATGCATAAACGAGGAATCATTCAGGTTCTCGAAGATGG
 
. : . : . : . : . : . :
rJMSF031P15- CAGCAGACCGTCCCTTTTGGCCATCTCATAAAGGGCAATAGCAGTTAGCGTTTTTGCATC
rJMFF019H16- CAGCAGACCGTCCCTTTTGGCCATCTCATAAAGGGCAATAGCAGTTAGCGTTTTTGCATC
                      ____________________________________________________________
consensus CAGCAGACCGTCCCTTTTGGCCATCTCATAAAGGGCAATAGCAGTTAGCGTTTTTGCATC
 
. : . : . : . : . : . :
rJMSF031P15- AGCTGTAGAGCGCCAAAGCTTCTCATATGGAACTACATGAACCTTAATTAGCTCGCCATG
rJMFF019H16- AGCTGTAGAGCGCCAAAGCTTCTCATATGGAACTACATGAACCTTAATTAGCTCGCCATG
                      ____________________________________________________________
consensus AGCTGTAGAGCGCCAAAGCTTCTCATATGGAACTACATGAACCTTAATTAGCTCGCCATG
 
. : . : . : . : . : . :
rJMSF031P15- ATCTCGAAGACCTGTTTCTTTCCCTTGTAGCTGTCTAATTTTCTCTATACTCACATTCCC
rJMFF019H16- ATCTCGAAGACCTGTTTCTTTCCCTTGTAGCTGTCTAATTTTCTCTATACTCACATTCCC
                      ____________________________________________________________
consensus ATCTCGAAGACCTGTTTCTTTCCCTTGTAGCTGTCTAATTTTCTCTATACTCACATTCCC
 
. : . : . : . : . : . :
rJMSF031P15- TCTGTACAGAAACAGACTAATCTCCTCGTCACAGCCTCCAGGAGAAGGGAAGACTCTGCA
rJMFF019H16- TCTGTACAGAAACAGACTAATCTCCTCGTCACAGCCTCCAGGAGAAGGGAAGACTCTGCA
JMSF031P15+ GAGAAGGGAAGACTCTGCA
                      ____________________________________________________________
consensus TCTGTACAGAAACAGACTAATCTCCTCGTCACAGCCTCCAGGAGAAGGGAAGACTCTGCA
 
. : . : . : . : . : . :
rJMSF031P15- GCCAGTAGAAGGGTCCAGAAGCGCTGTAAGGTCAATCATGTCTTGCGCATTTAAATGTAT
rJMFF019H16- GCCAGTAGAAGGGTCCAGAAGCGCTGTAAGGTCAATCATGTCTTGCGCATTTAAATGTAT
JMSF031P15+ GCCAGTAGAAGGGTCCAGAAGCGCTGTAAGGTCAATCATGTCTTGCGCATTTAAATGTAT
                      ____________________________________________________________
consensus GCCAGTAGAAGGGTCCAGAAGCGCTGTAAGGTCAATCATGTCTTGCGCATTTAAATGTAT
 
. : . : . : . : . : . :
rJMSF031P15- TCCGGTCTCTTCTTCAACCTCTCGAACTGCTGTTCCCGCAAAGTCACCATTGTCATCATC
rJMFF019H16- TCCGGTCTCTTCTTCAACCTCTCGAACTGCTGTTCCCGCAAAGTCACCATTGTCATCATC
JMSF031P15+ TCCGGTCTCTTCTTCAACCTCTCGAACTGCTGTTCCCGCAAAGTCACCATTGTCATCATC
JMFF019H16+ GAACTGCTGTTCCCGCAAAGTCACCATTGTCATCATC
                      ____________________________________________________________
consensus TCCGGTCTCTTCTTCAACCTCTCGAACTGCTGTTCCCGCAAAGTCACCATTGTCATCATC
 
. : . : . : . : . : . :
rJMSF031P15- TAACATCCCGGCTGGCAATTCCAATATAAGCCTCCCAACAGGGACCCTGACCTGCTCCGT
rJMFF019H16- TAACATCCCGGCTGGCAATTCCAATATAAGCCTCCCAACAGGGACCCTGACCTGCTCCGT
JMSF031P15+ TAACATCCCGGCTGGCAATTCCAATATAAGCCTCCCAACAGGGACCCTGACCTGCTCCGT
JMFF019H16+ TAACATCCCGGCTGGCAATTCCAATATAAGCCTCCCAACAGGGACCCTGACCTGCTCCGT
                      ____________________________________________________________
consensus TAACATCCCGGCTGGCAATTCCAATATAAGCCTCCCAACAGGGACCCTGACCTGCTCCGT
 
. : . : . : . : . : . :
rJMSF031P15- GAGCACAGCATAATTCTCACCCTCCGACTCCAAAATGATTAGCACTGCAACAGCTGGTCC
rJMFF019H16- GAGCACAGCATAATTCTCACCCTCCGACTCCAAAATGATTAGCACTGCAACAGCTGGTCC
JMSF031P15+ GAGCACAGCATAATTCTCACCCTCCGACTCCAAAATGATTAGCACTGCAACAGCTGGTCC
JMFF019H16+ GAGCACAGCATAATTCTCACCCTCCGACTCCAAAATGATTAGCACTGCAACAGCTGGTCC
                      ____________________________________________________________
consensus GAGCACAGCATAATTCTCACCCTCCGACTCCAAAATGATTAGCACTGCAACAGCTGGTCC
 
. : . : . : . : . : . :
rJMSF031P15- TCGTGCAAAGACAATACCAGGAACCTTTTGTCCCGTCTCCTTATCAATAATATCCGCTTT
rJMFF019H16- TCGTGCAAAGACAATACCAGGAACCTTTTGTCCCGTCTCCTTATCAATAATATCCGCTTT
JMSF031P15+ TCGTGCAAAGACAATACCAGGAACCTTTTGTCCCGTCTCCTTATCAATAATATCCGCTTT
JMFF019H16+ TCGTGCAAAGACAATACCAGGAACCTTTTGTCCCGTCTCCTTATCAATAATATCCGCTTT
                      ____________________________________________________________
consensus TCGTGCAAAGACAATACCAGGAACCTTTTGTCCCGTCTCCTTATCAATAATATCCGCTTT
 
. : . : . : . : . : . :
rJMSF031P15- GAACTTGAGAAACCCAACACGTTTGCCAAACATATCTACACCCTGAATCAGCACTTGTGT
rJMFF019H16- GAACTTGAGAAACCCAACACGTTTGCCAAACATATCTACACCCTGAATCAGCACTTGTGT
JMSF031P15+ GAACTTGAGAAACCCAACACGTTTGCCAAACATATCTACACCCTGAATCAGCACTTGTGT
JMFF019H16+ GAACTTGAGAAACCCAACACGTTTGCCAAACATATCTACACCCTGAATCAGCACTTGTGT
                      ____________________________________________________________
consensus GAACTTGAGAAACCCAACACGTTTGCCAAACATATCTACACCCTGAATCAGCACTTGTGT
 
. : . : . : . : . : . :
rJMSF031P15- CAAAGACATTGACCCATTAGCCAGCAGGCC
rJMFF019H16- CAAAGACATTGACCCATTAGCCAGCAGGCCTGTTTCAGTTTGTATATTTTTCAGCCACTG
JMSF031P15+ CAAAGACATTGACCCATTAGCCAGCAGGCCTGTTTCAGTTTGTATATTTTTCAGCCACTG
JMFF019H16+ CAAAGACATTGACCCATTAGCCAGCAGGCCTGTTTCAGTTTGTATATTTTTCAGCCACTG
                      ____________________________________________________________
consensus CAAAGACATTGACCCATTAGCCAGCAGGCCTGTTTCAGTTTGTATATTTTTCAGCCACTG
 
. : . : . : . : . : . :
rJMFF019H16- CTTG
JMSF031P15+ CTTGAATAGAGAGGACTCAATAGCATTCTTGAATTGGGTGTCGGAGAGGCCAGGAGCAGC
JMFF019H16+ CTTGAATAGAGAGGACTCAATAGCATTCTTGAATTGGGTGTCGGAGAGGCCAGGAGCAGA
                      ____________________________________________________________
consensus CTTGAATAGAGAGGACTCAATAGCATTCTTGAATTGGGTGTCGGAGAGGCCAGGAGCAGC
 
. : . : . : . : . : . :
JMSF031P15+ GACAACGGAGACGGGTTGACCGAGTTGACTCGGGAGACTGAGGGTGTGGATGAGGTGAGT
JMFF019H16+ GACAACGGAGACGGGTTGACCGAGTTGACTCGGGAGACTGAGGGTGTGGATGAGGTGAGT
                      ____________________________________________________________
consensus GACAACGGAGACGGGTTGACCGAGTTGACTCGGGAGACTGAGGGTGTGGATGAGGTGAGT
 
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JMSF031P15+ GGGCGACTCGGTCGCCATCTTCACGGAGAAATTTCTGGGAGTTCTGTGAATCAGTAGAGT
JMFF019H16+ GGGCGACTCGGTCGCCATCTTCACGGAGAAATTTCTGGGAGTTCTGTGAATCAGTAGAGT
                      ____________________________________________________________
consensus GGGCGACTCGGTCGCCATCTTCACGGAGAAATTTCTGGGAGTTCTGTGAATCAGTAGAGT
 
. : . : . : . : . : . :
JMSF031P15+ GGGGGCAAATTTCTTGAGCTGCCTCGAAAACGTTATGGAC
JMFF019H16+ GGGGGCAAATTTCTTGAGCTGCCTCGAAAACGTTATGGACATCGAAGAAGAGACAGTGGC
                      ____________________________________________________________
consensus GGGGGCAAATTTCTTGAGCTGCCTCGAAAACGTTATGGACATCGAAGAAGAGACAGTGGC