Contig 005956:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019H16Sequence577005956 (4)ref|XP_009586886.1|2e-94PREDICTED: nudix hydrolase 14, chloroplastic [Nicotiana tomentosiformis]760005956 (4)ref|XP_009768771.1|4e-145PREDICTED: nudix hydrolase 14, chloroplastic [Nicotiana sylvestris]
JMSF031P15Sequence660005956 (4)ref|XP_009586886.1|2e-116PREDICTED: nudix hydrolase 14, chloroplastic [Nicotiana tomentosiformis]731005956 (4)ref|XP_009768771.1|2e-136PREDICTED: nudix hydrolase 14, chloroplastic [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF031P15-                             AACTGTTCTTTTATTAATTGTAATGGTAATAACTAGATTCC
rJMFF019H16-                                          TTAATTGTAATGGTAATAACTAGATTCC
                      ____________________________________________________________
consensus                                AACTGTTCTTTTATTAATTGTAATGGTAATAACTAGATTCC
 
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rJMSF031P15-          TATGACCAACATTAGGTCTACGATGCATAAACGAGGAATCATTCAGGTTCTCGAAGATGG
rJMFF019H16-          TATGACCAACATTAGGTCTACGATGCATAAACGAGGAATCATTCAGGTTCTCGAAGATGG
                      ____________________________________________________________
consensus             TATGACCAACATTAGGTCTACGATGCATAAACGAGGAATCATTCAGGTTCTCGAAGATGG
 
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rJMSF031P15-          CAGCAGACCGTCCCTTTTGGCCATCTCATAAAGGGCAATAGCAGTTAGCGTTTTTGCATC
rJMFF019H16-          CAGCAGACCGTCCCTTTTGGCCATCTCATAAAGGGCAATAGCAGTTAGCGTTTTTGCATC
                      ____________________________________________________________
consensus             CAGCAGACCGTCCCTTTTGGCCATCTCATAAAGGGCAATAGCAGTTAGCGTTTTTGCATC
 
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rJMSF031P15-          AGCTGTAGAGCGCCAAAGCTTCTCATATGGAACTACATGAACCTTAATTAGCTCGCCATG
rJMFF019H16-          AGCTGTAGAGCGCCAAAGCTTCTCATATGGAACTACATGAACCTTAATTAGCTCGCCATG
                      ____________________________________________________________
consensus             AGCTGTAGAGCGCCAAAGCTTCTCATATGGAACTACATGAACCTTAATTAGCTCGCCATG
 
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rJMSF031P15-          ATCTCGAAGACCTGTTTCTTTCCCTTGTAGCTGTCTAATTTTCTCTATACTCACATTCCC
rJMFF019H16-          ATCTCGAAGACCTGTTTCTTTCCCTTGTAGCTGTCTAATTTTCTCTATACTCACATTCCC
                      ____________________________________________________________
consensus             ATCTCGAAGACCTGTTTCTTTCCCTTGTAGCTGTCTAATTTTCTCTATACTCACATTCCC
 
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rJMSF031P15-          TCTGTACAGAAACAGACTAATCTCCTCGTCACAGCCTCCAGGAGAAGGGAAGACTCTGCA
rJMFF019H16-          TCTGTACAGAAACAGACTAATCTCCTCGTCACAGCCTCCAGGAGAAGGGAAGACTCTGCA
JMSF031P15+                                                    GAGAAGGGAAGACTCTGCA
                      ____________________________________________________________
consensus             TCTGTACAGAAACAGACTAATCTCCTCGTCACAGCCTCCAGGAGAAGGGAAGACTCTGCA
 
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rJMSF031P15-          GCCAGTAGAAGGGTCCAGAAGCGCTGTAAGGTCAATCATGTCTTGCGCATTTAAATGTAT
rJMFF019H16-          GCCAGTAGAAGGGTCCAGAAGCGCTGTAAGGTCAATCATGTCTTGCGCATTTAAATGTAT
JMSF031P15+           GCCAGTAGAAGGGTCCAGAAGCGCTGTAAGGTCAATCATGTCTTGCGCATTTAAATGTAT
                      ____________________________________________________________
consensus             GCCAGTAGAAGGGTCCAGAAGCGCTGTAAGGTCAATCATGTCTTGCGCATTTAAATGTAT
 
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rJMSF031P15-          TCCGGTCTCTTCTTCAACCTCTCGAACTGCTGTTCCCGCAAAGTCACCATTGTCATCATC
rJMFF019H16-          TCCGGTCTCTTCTTCAACCTCTCGAACTGCTGTTCCCGCAAAGTCACCATTGTCATCATC
JMSF031P15+           TCCGGTCTCTTCTTCAACCTCTCGAACTGCTGTTCCCGCAAAGTCACCATTGTCATCATC
JMFF019H16+                                  GAACTGCTGTTCCCGCAAAGTCACCATTGTCATCATC
                      ____________________________________________________________
consensus             TCCGGTCTCTTCTTCAACCTCTCGAACTGCTGTTCCCGCAAAGTCACCATTGTCATCATC
 
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rJMSF031P15-          TAACATCCCGGCTGGCAATTCCAATATAAGCCTCCCAACAGGGACCCTGACCTGCTCCGT
rJMFF019H16-          TAACATCCCGGCTGGCAATTCCAATATAAGCCTCCCAACAGGGACCCTGACCTGCTCCGT
JMSF031P15+           TAACATCCCGGCTGGCAATTCCAATATAAGCCTCCCAACAGGGACCCTGACCTGCTCCGT
JMFF019H16+           TAACATCCCGGCTGGCAATTCCAATATAAGCCTCCCAACAGGGACCCTGACCTGCTCCGT
                      ____________________________________________________________
consensus             TAACATCCCGGCTGGCAATTCCAATATAAGCCTCCCAACAGGGACCCTGACCTGCTCCGT
 
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rJMSF031P15-          GAGCACAGCATAATTCTCACCCTCCGACTCCAAAATGATTAGCACTGCAACAGCTGGTCC
rJMFF019H16-          GAGCACAGCATAATTCTCACCCTCCGACTCCAAAATGATTAGCACTGCAACAGCTGGTCC
JMSF031P15+           GAGCACAGCATAATTCTCACCCTCCGACTCCAAAATGATTAGCACTGCAACAGCTGGTCC
JMFF019H16+           GAGCACAGCATAATTCTCACCCTCCGACTCCAAAATGATTAGCACTGCAACAGCTGGTCC
                      ____________________________________________________________
consensus             GAGCACAGCATAATTCTCACCCTCCGACTCCAAAATGATTAGCACTGCAACAGCTGGTCC
 
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rJMSF031P15-          TCGTGCAAAGACAATACCAGGAACCTTTTGTCCCGTCTCCTTATCAATAATATCCGCTTT
rJMFF019H16-          TCGTGCAAAGACAATACCAGGAACCTTTTGTCCCGTCTCCTTATCAATAATATCCGCTTT
JMSF031P15+           TCGTGCAAAGACAATACCAGGAACCTTTTGTCCCGTCTCCTTATCAATAATATCCGCTTT
JMFF019H16+           TCGTGCAAAGACAATACCAGGAACCTTTTGTCCCGTCTCCTTATCAATAATATCCGCTTT
                      ____________________________________________________________
consensus             TCGTGCAAAGACAATACCAGGAACCTTTTGTCCCGTCTCCTTATCAATAATATCCGCTTT
 
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rJMSF031P15-          GAACTTGAGAAACCCAACACGTTTGCCAAACATATCTACACCCTGAATCAGCACTTGTGT
rJMFF019H16-          GAACTTGAGAAACCCAACACGTTTGCCAAACATATCTACACCCTGAATCAGCACTTGTGT
JMSF031P15+           GAACTTGAGAAACCCAACACGTTTGCCAAACATATCTACACCCTGAATCAGCACTTGTGT
JMFF019H16+           GAACTTGAGAAACCCAACACGTTTGCCAAACATATCTACACCCTGAATCAGCACTTGTGT
                      ____________________________________________________________
consensus             GAACTTGAGAAACCCAACACGTTTGCCAAACATATCTACACCCTGAATCAGCACTTGTGT
 
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rJMSF031P15-          CAAAGACATTGACCCATTAGCCAGCAGGCC                              
rJMFF019H16-          CAAAGACATTGACCCATTAGCCAGCAGGCCTGTTTCAGTTTGTATATTTTTCAGCCACTG
JMSF031P15+           CAAAGACATTGACCCATTAGCCAGCAGGCCTGTTTCAGTTTGTATATTTTTCAGCCACTG
JMFF019H16+           CAAAGACATTGACCCATTAGCCAGCAGGCCTGTTTCAGTTTGTATATTTTTCAGCCACTG
                      ____________________________________________________________
consensus             CAAAGACATTGACCCATTAGCCAGCAGGCCTGTTTCAGTTTGTATATTTTTCAGCCACTG
 
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rJMFF019H16-          CTTG                                                        
JMSF031P15+           CTTGAATAGAGAGGACTCAATAGCATTCTTGAATTGGGTGTCGGAGAGGCCAGGAGCAGC
JMFF019H16+           CTTGAATAGAGAGGACTCAATAGCATTCTTGAATTGGGTGTCGGAGAGGCCAGGAGCAGA
                      ____________________________________________________________
consensus             CTTGAATAGAGAGGACTCAATAGCATTCTTGAATTGGGTGTCGGAGAGGCCAGGAGCAGC
 
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JMSF031P15+           GACAACGGAGACGGGTTGACCGAGTTGACTCGGGAGACTGAGGGTGTGGATGAGGTGAGT
JMFF019H16+           GACAACGGAGACGGGTTGACCGAGTTGACTCGGGAGACTGAGGGTGTGGATGAGGTGAGT
                      ____________________________________________________________
consensus             GACAACGGAGACGGGTTGACCGAGTTGACTCGGGAGACTGAGGGTGTGGATGAGGTGAGT
 
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JMSF031P15+           GGGCGACTCGGTCGCCATCTTCACGGAGAAATTTCTGGGAGTTCTGTGAATCAGTAGAGT
JMFF019H16+           GGGCGACTCGGTCGCCATCTTCACGGAGAAATTTCTGGGAGTTCTGTGAATCAGTAGAGT
                      ____________________________________________________________
consensus             GGGCGACTCGGTCGCCATCTTCACGGAGAAATTTCTGGGAGTTCTGTGAATCAGTAGAGT
 
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JMSF031P15+           GGGGGCAAATTTCTTGAGCTGCCTCGAAAACGTTATGGAC                    
JMFF019H16+           GGGGGCAAATTTCTTGAGCTGCCTCGAAAACGTTATGGACATCGAAGAAGAGACAGTGGC
                      ____________________________________________________________
consensus             GGGGGCAAATTTCTTGAGCTGCCTCGAAAACGTTATGGACATCGAAGAAGAGACAGTGGC