Contig 005953:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018O08Sequence225005953 (2)ref|XP_008348263.1|1e-14PREDICTED: zinc finger protein CONSTANS-LIKE 2-like [Malus domestica]203005953 (2)ref|XP_008348263.1|1e-14PREDICTED: zinc finger protein CONSTANS-LIKE 2-like [Malus domestica]

Alignment

This contig is upended


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rJMFF018O08+                         GAAAGCGTACGCCGAGACCAGGCCGAGGATCAAAGGCCGTTTCGC
JMFF018O08-                          GAAAGCGTACGCCGAGACCAGGCCGAGGATCAAAGGCCGTTTCGC
                      ____________________________________________________________
consensus                            GAAAGCGTACGCCGAGACCAGGCCGAGGATCAAAGGCCGTTTCGC
 
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rJMFF018O08+          GAAGAGGACAGAGGTGGAATCGGATATTGATGCCATCTTCTCTGCTGATTTCGTCGCCGA
JMFF018O08-           GAAGAGGACAGAGGTGGAATCGGATATTGATGCCATCTTCTCTGCTGATTTCGTCGCCGA
                      ____________________________________________________________
consensus             GAAGAGGACAGAGGTGGAATCGGATATTGATGCCATCTTCTCTGCTGATTTCGTCGCCGA
 
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rJMFF018O08+          TCATGGCTACGGCGTCGTCCCGTCGTTTTGATCACGGACGGCAATTAGACTATTTCGAAT
JMFF018O08-           TCATGGCTACGGCGTCGTCCCGTCGTTTTGATCACGGACGGCAATTAGACTATTTCGAAT
                      ____________________________________________________________
consensus             TCATGGCTACGGCGTCGTCCCGTCGTTTTGATCACGGACGGCAATTAGACTATTTCGAAT
 
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rJMFF018O08+          GTTTTTAATTAAATTAAAAACAAATTAATAAAAGCAAC                      
JMFF018O08-           GTTTTTAATTAAATTAAAAACAAATTAATAAAAGCAACGACGTTTTTGCCAAAAAAAAAA
                      ____________________________________________________________
consensus             GTTTTTAATTAAATTAAAAACAAATTAATAAAAGCAACGACGTTTTTGCCAAAAAAAAAA