Contig 005950:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF036D10-                                GAATTCCGCACCCTTAATACATACACAGTGCAAGTATC
                      ____________________________________________________________
consensus                                   GAATTCCGCACCCTTAATACATACACAGTGCAAGTATC
 
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rJMSF036D10-          TTTCTTTTTAAGATCGTGTTTCCAGAGACAAAAACACTAAGACAGAATATTGTGTGCCTT
                      ____________________________________________________________
consensus             TTTCTTTTTAAGATCGTGTTTCCAGAGACAAAAACACTAAGACAGAATATTGTGTGCCTT
 
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rJMSF036D10-          CTACAGATATATAGAATAGAAAACCATCACTTTCCGCAGTTGAAGCCATGACAAACAGAG
rJMFF018G09-                                    TCACTTTCCGCAGTTGAAGCCATGACAAACAGAG
                      ____________________________________________________________
consensus             CTACAGATATATAGAATAGAAAACCATCACTTTCCGCAGTTGAAGCCATGACAAACAGAG
 
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rJMSF036D10-          AGTACTATGATGAGGATCAAGGCTATGATGATACCCAACACTATCAACTTCACCTTCATG
rJMFF018G09-          AGTACTATGATGAGGATCAAGGCTATGATGATACCCAACACTATCAACTTCACCTTCATG
                      ____________________________________________________________
consensus             AGTACTATGATGAGGATCAAGGCTATGATGATACCCAACACTATCAACTTCACCTTCATG
 
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rJMSF036D10-          TTTTGCAGCCACATCTTTCTCCGGATTTTAGTGCCAGTGCTCCTGAAGTCTTGTGCCTGC
rJMFF018G09-          TTTTGCAGCCACATCTTTCTCCGGATTTTAGTGCCAGTGCTCCTGAAGTCTTGTGCCTGC
JMSF036D10+                                         GTGCCAGTGCTCCTGAAGTCTTGTGCCTGC
                      ____________________________________________________________
consensus             TTTTGCAGCCACATCTTTCTCCGGATTTTAGTGCCAGTGCTCCTGAAGTCTTGTGCCTGC
 
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rJMSF036D10-          TGATGAAGATTTTCAGTCTTGTCGACAAGAAGCTCTATCTTTTCTCCACGATCTAGAACC
rJMFF018G09-          TGATGAAGATTTTCAGTCTTGTCGACAAGAAGCTCTATCTTTTCTCCACGATCTAGAACC
JMSF036D10+           TGATGAAGATTTTCAGTCTTGTCGACAAGAAGCTCTATCTTTTCTCCACGATCTAGAACC
                      ____________________________________________________________
consensus             TGATGAAGATTTTCAGTCTTGTCGACAAGAAGCTCTATCTTTTCTCCACGATCTAGAACC
 
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rJMSF036D10-          TTCTCAATATTGTCCATCATGACACCTTTGACTTCAGAAACTTGTGCTTTAACTTTTGCA
rJMFF018G09-          TTCTCAATATTGTCCATCATGACACCTTTGACTTCAGAAACTTGTGCTTTAACTTTTGCA
JMSF036D10+           TTCTCAATATTGTCCATCATGACACCTTTGACTTCAGAAACTTGTGCTTTAACTTTTGCA
JMFF018G09+                     TGTCCATCATGACACCTTTGACTTCAGAAACTTGTGCTTTAACTTTTGCA
                      ____________________________________________________________
consensus             TTCTCAATATTGTCCATCATGACACCTTTGACTTCAGAAACTTGTGCTTTAACTTTTGCA
 
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rJMSF036D10-          ATTTTGCTTATCTCCTCAGGATGGTCAACACAATATTGCATATGCTCCCTCAATTTAGCC
rJMFF018G09-          ATTTTGCTTATCTCCTCAGGATGGTCAACACAATATTGCATATGCTCCCTCAATTTAGCC
JMSF036D10+           ATTTTGCTTATCTCCTCAGGATGGTCAACACAATATTGCATATGCTCCCTCAATTTAGCC
JMFF018G09+           ATTTTGCTTATCTCCTCAGGATGGTCAACACAATATTGCATATGCTCCCTCAATTTAGCC
                      ____________________________________________________________
consensus             ATTTTGCTTATCTCCTCAGGATGGTCAACACAATATTGCATATGCTCCCTCAATTTAGCC
 
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rJMSF036D10-          CCAAATTCCTTGTTAAAGCTATTAGCAGGAGCAGTTGCAGCCTTTCCACCACCATATTTT
rJMFF018G09-          CCAAATTCCTTGTTAAAGCTATTAGCAGGAGCAGTTGCAGCCTTTCCACCACCATATTTT
JMSF036D10+           CCAAATTCCTTGTTAAAGCTATTAGCAGGAGCAGTTGCAGCCTTTCCACCACCATATTTT
JMFF018G09+           CCAAATTCCTTGTTAAAGCTATTAGCAGGAGCAGTTGCAGCCTTTCCACCACCATATTTT
                      ____________________________________________________________
consensus             CCAAATTCCTTGTTAAAGCTATTAGCAGGAGCAGTTGCAGCCTTTCCACCACCATATTTT
 
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rJMSF036D10-          GCTACAAAATCATCCTTAATACGCTCCAGAAATGCCATAGGGACCTGTCTTCCAGCGGAT
rJMFF018G09-          GCTACAAAATCATCCTTAATACGCTCCAGAAATGCCATAGGGACCTGTCTTCCAGCGGAT
JMSF036D10+           GCTACAAAATCATCCTTAATACGCTCCAGAAATGCCATAGGGACCTGTCTTCCAGCGGAT
JMFF018G09+           GCTACAAAATCATCCTTAATACGCTCCAGAAATGCCATAGGGACCTGTCTTCCAGCGGAT
                      ____________________________________________________________
consensus             GCTACAAAATCATCCTTAATACGCTCCAGAAATGCCATAGGGACCTGTCTTCCAGCGGAT
 
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rJMSF036D10-          TCTTCAGCAACAACGCAATAAGTGAAGCCGTTATCGACGAGGTAGTTGAAGGTGTGGCCA
rJMFF018G09-          TCTTCAGCAACAACGCAATAAGTGAAGCCGTTATCGACGAGGTAGTTGAAGGTGTGGCCA
JMSF036D10+           TCTTCAGCAACAACGCAATAAGTGAAGCCGTTATCGACGAGGTAGTTGAAGGTGTGGCCA
JMFF018G09+           TCTTCAGCAACAACGCAATAAGTGAAGCCGTTATCGACGAGGTAGTTGAAGGTGTGGCCA
                      ____________________________________________________________
consensus             TCTTCAGCAACAACGCAATAAGTGAAGCCGTTATCGACGAGGTAGTTGAAGGTGTGGCCA
 
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rJMSF036D10-          TCGCAGTTGTAGGTGAACTTGTTGTTGGAGGCTGGAAGCTTCTGGAGGCACTGAAAGGCT
rJMFF018G09-          TCGCAGTTGTAGGTGAACTTGTTGTTGGAGGCTGGAAGCTTCTGGAGGCACTGAAAGGCT
JMSF036D10+           TCGCAGTTGTAGGTGAACTTGTTGTTGGAGGCTGGAAGCTTCTGGAGGCACTGAAAGGCT
JMFF018G09+           TCGCAGTTGTAGGTGAACTTGTTGTTGGAGGCTGGAAGCTTCTGGAGGCACTGAAAGGCT
                      ____________________________________________________________
consensus             TCGCAGTTGTAGGTGAACTTGTTGTTGGAGGCTGGAAGCTTCTGGAGGCACTGAAAGGCT
 
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rJMSF036D10-          ATGGAGTTGAAGTTGCCGCTGAAGTCGGTGTGTTCCGCCAGTATAACGTTCCCACGGGCC
rJMFF018G09-          ATGGAGTTGAAGTTGCCGCTGAAGTCGGTGTGTTCCGCCAGTATAACGTTCCCACGGGCC
JMSF036D10+           ATGGAGTTGAAGTTGCCGCTGAAGTCGGTGTGTTCCGCCAGTATAACGTTCCCACGGGCC
JMFF018G09+           ATGGAGTTGAAGTTGCCGCTGAAGTCGGTGTGTTCCGCCAGTATAACGTTCCCACGGGCC
                      ____________________________________________________________
consensus             ATGGAGTTGAAGTTGCCGCTGAAGTCGGTGTGTTCCGCCAGTATAACGTTCCCACGGGCC
 
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rJMSF036D10-          ACGAACGCATAGATTAACGCCTTCTGCTGCCC                            
rJMFF018G09-          ACGAACGCATAGATTAACGCCTTCTGCTGCCCC                           
JMSF036D10+           ACGAACGCATAGATTAACGCCTTCTGCTGCCCCATTTC                      
JMFF018G09+           ACGAACGCATAGATTAACGCCTTCTGCTGCCCCATTTCAGGACCGGTTTCCTCCAAGCTG
                      ____________________________________________________________
consensus             ACGAACGCATAGATTAACGCCTTCTGCTGCCCCATTTCAGGACCGGTTTCCTCCAAGCTG
 
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JMFF018G09+           CGGCGTTTAGGGTTTACGCGATTGCCTTGGCAAAACAGCAATCAAGCAAATCGAATTGAG
                      ____________________________________________________________
consensus             CGGCGTTTAGGGTTTACGCGATTGCCTTGGCAAAACAGCAATCAAGCAAATCGAATTGAG
 
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JMFF018G09+           GGGAGAGAAGGTTGTAGATGAAGGCCTTTGCTTTTTTCTAGAGAGTGGGAATGTGACGGT
                      ____________________________________________________________
consensus             GGGAGAGAAGGTTGTAGATGAAGGCCTTTGCTTTTTTCTAGAGAGTGGGAATGTGACGGT