Contig 005937:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015C03Sequence542005937 (2)ref|XP_006343376.1|3e-64PREDICTED: probable serine protease EDA2-like isoform X2 [Solanum tuberosum]
JMSF043C04Sequence767005937 (2)ref|XP_006343376.1|4e-120PREDICTED: probable serine protease EDA2-like isoform X2 [Solanum tuberosum]763023610ref|XP_006343375.1|3e-98PREDICTED: probable serine protease EDA2-like isoform X1 [Solanum tuberosum]

Alignment

This contig is upended


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JMSF043C04+                                               TTAGATGCAAGTTTCTTGTCAACG
                      ____________________________________________________________
consensus                                                 TTAGATGCAAGTTTCTTGTCAACG
 
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JMSF043C04+           AGTTGAGTAATTTCTTGCAGTGCACTTTTACATTCAGGGCCTGCAGATTCCCCAACCTGC
                      ____________________________________________________________
consensus             AGTTGAGTAATTTCTTGCAGTGCACTTTTACATTCAGGGCCTGCAGATTCCCCAACCTGC
 
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JMSF043C04+           TCATCAAATTCCGTGAAGTTGAATATAGAAAGAACAACTCCAGAACTTGCAAGACTTCCA
                      ____________________________________________________________
consensus             TCATCAAATTCCGTGAAGTTGAATATAGAAAGAACAACTCCAGAACTTGCAAGACTTCCA
 
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JMSF043C04+           CATGTTAGATGAGGGAACTTCAATCGAAACCAGGCACTAAGGGCTCCAGCATATGAAGTG
                      ____________________________________________________________
consensus             CATGTTAGATGAGGGAACTTCAATCGAAACCAGGCACTAAGGGCTCCAGCATATGAAGTG
 
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JMSF043C04+           CCAAAGACAAACCATGGATTATCAGCATTAGATTTATTGAGCTTAGCATTCAAGGTTTCC
JMFF015C03+                                                                     CC
                      ____________________________________________________________
consensus             CCAAAGACAAACCATGGATTATCAGCATTAGATTTATTGAGCTTAGCATTCAAGGTTTCC
 
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JMSF043C04+           TGATAATATTGACGGAAAGCAGCAAGGTCAAAAAGTGCCTGCTTTGATGAAAGATATTTC
JMFF015C03+           TGATAATATTGACGGAAAGCAGCAAGGTCAAAAAGTGCCTGCTTTGATGAAAGATATTTC
                      ____________________________________________________________
consensus             TGATAATATTGACGGAAAGCAGCAAGGTCAAAAAGTGCCTGCTTTGATGAAAGATATTTC
 
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JMSF043C04+           AGGTTCTCTGTGGTCAAAGATTTAAATGGTGAACTCTTGCCATAATACCGATGCTCAACA
JMFF015C03+           AGGTTCTCTGTGGTCAAAGATTTAAATGGTGAACTCTTGCCATAATACCGATGCTCAACA
                      ____________________________________________________________
consensus             AGGTTCTCTGTGGTCAAAGATTTAAATGGTGAACTCTTGCCATAATACCGATGCTCAACA
 
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JMSF043C04+           GAAACAACAGCAGCTCCAAACTTCTTAGCCAAAACACTGATGTAGTCATTAGGTATCCCA
JMFF015C03+           GAAACAACAGCAGCTCCAAACTTCTTAGCCAAAACACTGATGTAGTCATTAGGTATCCCA
                      ____________________________________________________________
consensus             GAAACAACAGCAGCTCCAAACTTCTTAGCCAAAACACTGATGTAGTCATTAGGTATCCCA
 
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JMSF043C04+           TTACAAGAAGCTTCCCCGCATATTTTCAAAAATATTGGTCCATCAGGAATGCGGAAGTGG
JMFF015C03+           TTACAAGAAGCTTCCCCGCATATTTTCAAAAATATTGGTCCATCAGGAATGCGGAAGTGG
                      ____________________________________________________________
consensus             TTACAAGAAGCTTCCCCGCATATTTTCAAAAATATTGGTCCATCAGGAATGCGGAAGTGG
 
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JMSF043C04+           TCAAGAAACTCATAATATCGTTGGCTGAATTTACGATGGTCATAAGGAGAGAAATGATCG
JMFF015C03+           TCAAGAAACTCATAATATCGTTGGCTGAATTTACGATGGTCATAAGGAGAGAAATGATCG
                      ____________________________________________________________
consensus             TCAAGAAACTCATAATATCGTTGGCTGAATTTACGATGGTCATAAGGAGAGAAATGATCG
 
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JMSF043C04+           AGAGTTTGATTGAGCCAGAGTTCATCCTGGGTCAAATACTTGCTGCTTTCCGCAGAGGAT
JMFF015C03+           AGAGTTTGATTGAGCCAGAGTTCATCCTGGGTCAAATACTTGCTGCTTTCCGCAGAGGAT
                      ____________________________________________________________
consensus             AGAGTTTGATTGAGCCAGAGTTCATCCTGGGTCAAATACTTGCTGCTTTCCGCAGAGGAT
 
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JMSF043C04+           AGCTGGAGAAGACTGGACACTACGACGCCGTTTGAAGTTGCCAGAAATGACAGGAAGAAG
JMFF015C03+           AGCTGGNGAAGACTGGACACTACGACGCCGTTTGAAGTTGCCAGAANTGACAGGAAGAAG
                      ____________________________________________________________
consensus             AGCTGGAGAAGACTGGACACTACGACGCCGTTTGAAGTTGCCAGAAATGACAGGAAGAAG
 
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JMSF043C04+           AAGACGAAGAAGAAACATGCAGTCAGCTTCATGTTGATCTGATTATCGTCCCTCTTCTTA
JMFF015C03+           AAGACGAAGAAGAAACATGCAGTCAGCTTCATGTTGATCTGATTATCGTCCCTCTTCTTA
                      ____________________________________________________________
consensus             AAGACGAAGAAGAAACATGCAGTCAGCTTCATGTTGATCTGATTATCGTCCCTCTTCTTA
 
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JMSF043C04+           AGCCACTCAAATCGCAGTGCTT                                      
JMFF015C03+           AGCCACTCAAATCGCAGTGCTTATGATCCTTTTTCTTGTCACAGGCCAATATGTATAGTC
                      ____________________________________________________________
consensus             AGCCACTCAAATCGCAGTGCTTATGATCCTTTTTCTTGTCACAGGCCAATATGTATAGTC