| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006O21 | Sequence | 637 | 005928 (4) | ref|XP_011072089.1| | 9e-73 | PREDICTED: SPX domain-containing membrane protein At4g22990-like [Sesamum indic | |||||
| JMFF012O10 | Sequence | 579 | 005928 (4) | ref|XP_011072089.1| | 3e-76 | PREDICTED: SPX domain-containing membrane protein At4g22990-like [Sesamum indic | |||||
| JMFF033M20 | Sequence | 517 | 005928 (4) | ref|XP_011072089.1| | 1e-55 | PREDICTED: SPX domain-containing membrane protein At4g22990-like [Sesamum indic | 754 | 002630 (3) | ref|XP_009792570.1| | 6e-73 | PREDICTED: SPX domain-containing membrane protein At4g22990-like isoform X3 [Ni |
| JMSF029B09 | Sequence | 698 | 005928 (4) | ref|XP_009593322.1| | 1e-95 | PREDICTED: SPX domain-containing membrane protein At4g22990 isoform X2 [Nicotia | 780 | 002630 (3) | ref|XP_009792570.1| | 2e-117 | PREDICTED: SPX domain-containing membrane protein At4g22990-like isoform X3 [Ni |
This contig is upended
. : . : . : . : . : . :
JMSF029B09+ CC
____________________________________________________________
consensus CC
. : . : . : . : . : . :
JMSF029B09+ ACATGCCTGAAAATTTGTCGAAGCTGTGAATAAGGATGATTAGCCCGAGTTTTGACATAA
JMFF006O21+ CTGTGAATAAGGATGATTAGCCCGAGTTTTGACATAA
____________________________________________________________
consensus ACATGCCTGAAAATTTGTCGAAGCTGTGAATAAGGATGATTAGCCCGAGTTTTGACATAA
. : . : . : . : . : . :
JMSF029B09+ TAATCAGTAAATTTATAGCCGAAGCGTTTGTCAAACTTCTTAAGGATTTTCCTCAGTCCA
JMFF006O21+ TAATCAGTAAATTTATAGCCGAAGCGTTTGTCAAACTTCTTAAGGATTTTCCTCAGTCCA
JMFF012O10+ GAAGCGTTNGTCAAACTTCTTAAGGATTTTCCTCAGTCCA
____________________________________________________________
consensus TAATCAGTAAATTTATAGCCGAAGCGTTTGTCAAACTTCTTAAGGATTTTCCTCAGTCCA
. : . : . : . : . : . :
JMFF033M20+ CCTATA
JMSF029B09+ ATGGCATTTATTTCAACAAAGAAGAGAAGTTTTAGAAGATCACGTCCCACA-CCCCTATA
JMFF006O21+ ATGGCATTTATTTCAACAAAGAAGAGAAGTTTTAGAAGATCACGTCCCACACCCCCTATA
JMFF012O10+ ATGGCATTTATTTCAACAAAGAAGAGAAGTTTTAGAAGATCACGTCCCACA-CCCCTATA
____________________________________________________________
consensus ATGGCATTTATTTCAACAAAGAAGAGAAGTTTTAGAAGATCACGTCCCACA-CCCCTATA
. : . : . : . : . : . :
JMFF033M20+ AGCTTCCCGTAGCTCATTGATTTTGGAAATTTCAGGTTGTTGCTGAAGAGCATCTTGTTG
JMSF029B09+ AGCTTCCCGTAGCTCATTGATTTTGGAAATTTCAGGTTGTTGCTGAAGAGCATCTTGTTG
JMFF006O21+ AGCTTCCCGTAGCTCATTGATTTTGGAAATTTCAGGTTGTTGCTGAAGAGCATCTTGTTG
JMFF012O10+ AGCTTCCCGTAGCTCATTGATTTTGGAAATTTCAGGTTGTTGCTGAAGAGCATCTTGTTG
____________________________________________________________
consensus AGCTTCCCGTAGCTCATTGATTTTGGAAATTTCAGGTTGTTGCTGAAGAGCATCTTGTTG
. : . : . : . : . : . :
JMFF033M20+ TTCATTGAGTTCAGCAATCCTGCCTGCAAGTGCTCCTTGTTGTTCTAACAGGAAAAGAAC
JMSF029B09+ TTCATTGAGTTCAGCAATCCTGCCTGCAAGTGCTCCTTGTTGTTCTAACAGGAAAAGAAC
JMFF006O21+ TTCATTGAGTTCAGCAATCCTGCCTGCAAGTGCTCCTTGTTGTTCTAACAGGAAAAGAAC
JMFF012O10+ TTCATTGAGTTCAGCAATCCTGCCTGCAAGTGCTCCTTGTTGTTCTAACAGGAAAAGAAC
____________________________________________________________
consensus TTCATTGAGTTCAGCAATCCTGCCTGCAAGTGCTCCTTGTTGTTCTAACAGGAAAAGAAC
. : . : . : . : . : . :
JMFF033M20+ AATCTTTTCAATCTGGTTGTCCAGCATTCGGGAGAAATCCTTGAGAACATGTCGGCGATC
JMSF029B09+ AATCTTTTCAATCTGGTTGTCCAGCATTCGGGAGAAATCCTTGAGAACATGTCGGCGATC
JMFF006O21+ AATCTTTTCAATCTGGTTGTCCAGCATTCGGGAGAAATCCTTGAGAACATGTCGGCGATC
JMFF012O10+ AATCTTTTCAATCTGGTTGTCCAGCATTCGGGAGAAATCCTTGAGAACATGTCGGCGATC
____________________________________________________________
consensus AATCTTTTCAATCTGGTTGTCCAGCATTCGGGAGAAATCCTTGAGAACATGTCGGCGATC
. : . : . : . : . : . :
JMFF033M20+ CAGTGCCCCAGCTTCAATCTGGTTCGAATACTGCCTAACCTTTTTCTTCATTATTTTGTA
JMSF029B09+ CAGTGCCCCAGCTTCAATCTGGTTCGAATACTGCCTAACCTTTTTCTTCATTATTTTGTA
JMFF006O21+ CAGTGCCCCAGCTTCAATCTGGTTCGAATACTGCCTAACCTTTTTCTTCATTATTTTGTA
JMFF012O10+ CAGTGCCCCAGCTTCAATCTGGTTCGAATACTGCCTAACCTTTTTCTTCATTATTTTGTA
____________________________________________________________
consensus CAGTGCCCCAGCTTCAATCTGGTTCGAATACTGCCTAACCTTTTTCTTCATTATTTTGTA
. : . : . : . : . : . :
JMFF033M20+ GTTGATGTAATATCCTTGCCATTCTTGAATTTGTCTTTCCTTCAGCTTCTTCCCAAAAGC
JMSF029B09+ GTTGATGTAATATCCTTGCCATTCTTGAATTTGTCTTTCCTTCAGCTTCTTCCCAAAAGC
JMFF006O21+ GTTGATGTAATATCCTTACCATTCTTGAATTTGTCTTTCCTTCAGCTTCTTCCCAAAAGC
JMFF012O10+ GTTGATGTAATATCCTTGCCATTCTTGAATTTGTCTTTCCTTCAGCTTCTTCCCAAAAGC
____________________________________________________________
consensus GTTGATGTAATATCCTTGCCATTCTTGAATTTGTCTTTCCTTCAGCTTCTTCCCAAAAGC
. : . : . : . : . : . :
JMFF033M20+ AACCATCTCTAGTCTCTTAC
JMSF029B09+ AACCATCTCTAGTCTCTTAC
JMFF006O21+ AACCATCTCTAGTCTCTTACTCCAACTTTTTCCAAGACAAAAACCCGAATTCGTCTTCCT
JMFF012O10+ AACCATCTCTAGTCTCTTACTCCAACTTTTTCCAAGACAAAAACCCGAATTCGTCTTCCT
____________________________________________________________
consensus AACCATCTCTAGTCTCTTACTCCAACTTTTTCCAAGACAAAAACCCGAATTCGTCTTCCT
. : . : . : . : . : . :
JMFF006O21+ CTGGTTGAGTTTACTAGTCAGGCGGCGGCGGCGACGACAGAGCGGGGCGGGAGATGAAGA
JMFF012O10+ CTGGTTGAGTTTACTAGTCAGGCGGCGGCGGCGACGACAGAGCGGGGCGGGAGATGAAGA
____________________________________________________________
consensus CTGGTTGAGTTTACTAGTCAGGCGGCGGCGGCGACGACAGAGCGGGGCGGGAGATGAAGA
. : . : . : . : . : . :
JMFF006O21+ TAGGAGAAGAAGAGTTGTGTGGTTTAGGAAACTGGAATTCCACAGGTGGCACTA
JMFF012O10+ TAGGAGAAGAAGAGTTGTGTGGTTTAGGAAACTGGAATTCCACAGGTGGCACTATCGCCG
____________________________________________________________
consensus TAGGAGAAGAAGAGTTGTGTGGTTTAGGAAACTGGAATTCCACAGGTGGCACTATCGCCG