Contig 005927:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF015G10+                    TCAACTGCGCAGTTGGCAAAGCAGAGGCGGTGAGGTGAGGCCTGAGGCAGA
JMFF012N04+                        CTGCGCAGTTGGCAAAGCAGAGGCGGTGAGGTGAGGCCTGAGGCAGA
                      ____________________________________________________________
consensus                      TCAACTGCGCAGTTGGCAAAGCAGAGGCGGTGAGGTGAGGCCTGAGGCAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF015G10+           AGACGGTGGCCGGTGGCGACTGGAGAGGAAGAGGCGCCGTCTGGTTGACTGTTGACGGTG
JMFF012N04+           AGACGGTGGCCGGTGGCGACTGGAGAGGAAGAGGCGCCGTCTGGTTGACTGTTGACGGTG
                      ____________________________________________________________
consensus             AGACGGTGGCCGGTGGCGACTGGAGAGGAAGAGGCGCCGTCTGGTTGACTGTTGACGGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF015G10+           AGGCAGGCGCAGACGCGAGAGGCCGAGAGCAGAGGCGAGGCGAGAGGAAAAGATGAGAGC
JMFF012N04+           AGGCAGGCGCAGACGCGAGAGGCCGAGAGCAGAGGCGAGGCGAGAGGAAAAGATGAGAGC
                      ____________________________________________________________
consensus             AGGCAGGCGCAGACGCGAGAGGCCGAGAGCAGAGGCGAGGCGAGAGGAAAAGATGAGAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF015G10+           AGTCTCTGAGATGGTGCCTGCTGACTCACAGCAAGTCTGCTACTCAGCTACAGGCTGACA
JMFF012N04+           AGTCTCTGAGATGGTGCCTGCTGACTCACAGCAAGTCTGCTACTCAGCTACAGGCTGACA
                      ____________________________________________________________
consensus             AGTCTCTGAGATGGTGCCTGCTGACTCACAGCAAGTCTGCTACTCAGCTACAGGCTGACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF015G10+           ATGGCATCTGGTATTCTGTCTAACAAGTTAACAATGCCTTATTGCCTTGAGGTACGTGAG
JMFF012N04+           ATGGCATCTGGTATTCTGTCTAACAAGTTAACAATGCCTTATTGCCTTGAGGTACGTGAG
                      ____________________________________________________________
consensus             ATGGCATCTGGTATTCTGTCTAACAAGTTAACAATGCCTTATTGCCTTGAGGTACGTGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF015G10+           AAATTAGAACACCTAGTTAGGCTTCCGGCCACTTGTTGCTGCGTTTGCTGGTTGTGACTT
JMFF012N04+           AAATTAGAACACCTAGTTAGGCTTCCGGCCACTTGTTGCTGCGTTTGCTGGTTGTGACTT
                      ____________________________________________________________
consensus             AAATTAGAACACCTAGTTAGGCTTCCGGCCACTTGTTGCTGCGTTTGCTGGTTGTGACTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF015G10+           GTGGAGACTGCCGTCCAGGTTTGAAAGTGGTCTGAGGAACGTCGGCGGGCCGGCAGCAGC
JMFF012N04+           GTGGAGACTGCCGTCCAGGTTTGAAAGTGGTCTGAGGAACGTCGGCGGGCCGGCAGCAGC
                      ____________________________________________________________
consensus             GTGGAGACTGCCGTCCAGGTTTGAAAGTGGTCTGAGGAACGTCGGCGGGCCGGCAGCAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF015G10+           AGTTCGCGGTGGACCTGGAGCCTGGCGGTGGT                            
JMFF012N04+           AGTTCGCGGTGGACCTGGAGCCTGGCGGTGGTCTGTGGACTATGAGACTGAGGAGTTCGC
                      ____________________________________________________________
consensus             AGTTCGCGGTGGACCTGGAGCCTGGCGGTGGTCTGTGGACTATGAGACTGAGGAGTTCGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF012N04+           CAATCGCAGTTGACGGCAGCCTGAGGAATGACGGGCGACGGAAACAGCAGTTCGCCTCTG
                      ____________________________________________________________
consensus             CAATCGCAGTTGACGGCAGCCTGAGGAATGACGGGCGACGGAAACAGCAGTTCGCCTCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF012N04+           TGCAGCTGTGCTTAGTGGATCGATCGATAGGTTTTGAAATTTTAGGAATTGGGAATCCAC
                      ____________________________________________________________
consensus             TGCAGCTGTGCTTAGTGGATCGATCGATAGGTTTTGAAATTTTAGGAATTGGGAATCCAC