Contig 005924:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF012D21-                                                             ACTTATTAT
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consensus                                                                ACTTATTAT
 
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rJMFF027N07-                                                       CTTGTATCCAATCTA
rJMFF001J08-                                                       CTTGTATCCAATCTA
rJMFF012D21-          ATTATTAAGGATTTGAGTGCGGACAAATACATATTACCATTAATCCTTGTATCCAATCTA
                      ____________________________________________________________
consensus             ATTATTAAGGATTTGAGTGCGGACAAATACATATTACCATTAATCCTTGTATCCAATCTA
 
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rJMFF027N07-          CTAGTCATGGATATTATTTTGGTAAGAAAATTGGTAAAACTCCTTAAATTGAGGTAGCCA
JMFF001J08+                                                   TCCTTAAATTGAGGTAGCCA
rJMFF001J08-          CTAGTCATGGATATTATTTTGGTAAGAAAATTGGTAAAACTCCTTAAATTGAGGTAGCCA
rJMFF012D21-          CTAGTCATGGATATTATTTTGGTAAGAAAATTGGTAAAACTCCTTAAATTGAGGTAGCCA
JMFF027N07+                                                          ATTGAGGTAGCCA
                      ____________________________________________________________
consensus             CTAGTCATGGATATTATTTTGGTAAGAAAATTGGTAAAACTCCTTAAATTGAGGTAGCCA
 
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rJMFF027N07-          AAATGGAGACATTTAGCAGCCAACCCATGTTGATGGGATGAAGGTAGGTGTCATGGTTAC
JMFF001J08+           AAATGGAGACATTTAGCAGCCAACCCATGTTGATGGGATGAAGGTAGGTGTCATGGTTAC
rJMFF001J08-          AAATGGAGACATTTAGCAGCCAACCCATGTTGATGGGATGAAGGTAGGTGTCATGGTTAC
rJMFF012D21-          AAATGGAGACATTTAGCAGCCAACCCATGTTGATGGGATGAAGGTAGGTGTCATGGTTAC
JMFF027N07+           AAATGGAGACATTTAGCAGCCAACCCATGTTGATGGGATGAAGGTAGGTGTCATGGTTAC
                      ____________________________________________________________
consensus             AAATGGAGACATTTAGCAGCCAACCCATGTTGATGGGATGAAGGTAGGTGTCATGGTTAC
 
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rJMFF027N07-          ACTCATCTGCTTTTTATGTCGTCGTCCTTGTCATTGTCATAAATAATATCTTCATCACTT
JMFF001J08+           ACTCATCTGCTTTTTATGTCGTCGTCCTTGTCATTGTCATAAATAATATCTTCATCACTT
rJMFF001J08-          ACTCATCTGCTTTTTATGTCGTCGTCCTTGTCATTGTCATAAATAATATCTTCATCACTT
rJMFF012D21-          ACTCATCTGCTTTTTATGTCGTCGTCCTTGTCATTGTCATAAATAATATCTTCATCACTT
JMFF027N07+           ACTCATCTGCTTTTTATGTCGTCGTCCTTGTCATTGTCATAAATAATATCTTCATCACTT
JMFF012D21+                          ATGTCGTCGTCCTTGTCATTGTCATAAATAATATCTTCATCACTT
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consensus             ACTCATCTGCTTTTTATGTCGTCGTCCTTGTCATTGTCATAAATAATATCTTCATCACTT
 
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rJMFF027N07-          CTACGAACCAAATCTTCATCACTATTACCAATGCCATCTTCATCACTGTGACCAACCAAA
JMFN020O23+                             TCACTATTACCAATGCCATCTTCATCACTGTGACCAACCAAA
JMFF001J08+           CTACGAACCAAATCTTCATCACTATTACCAATGCCATCTTCATCACTGTGACCAACCAAA
rJMFF001J08-          CTACGAACCAAATCTTCATCACTATTACCAATGCCATCTTCATCACTGTGACCAACCAAA
rJMFF012D21-          CTACGAACCAAATCTTCATCACTATTACCAATGCCATCTTCATCACTGTGACCAACCAAA
JMFF027N07+           CTACGAACCAAATCTTCATCACTATTACCAATGCCATCTTCATCACTGTGACCAACCAAA
JMFF012D21+           NTACGAACCAAATCTTCATCACTATTACCAATGCCATCTTCATCACTGTGACCAACCAAA
                      ____________________________________________________________
consensus             CTACGAACCAAATCTTCATCACTATTACCAATGCCATCTTCATCACTGTGACCAACCAAA
 
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rJMFF027N07-          TCTTCATCATCACCACCGCCATCTTCATGACTGTTACCAACCAAATCTTCATCACCGCCG
JMFN020O23+           TCTT-ATCATCACCGCCGCCATCTTCATGACTGTTACCAACCAAATCTTCATCACCGCCG
JMFF001J08+           TCTTCATCATCACCACCGCCATCTTCATGACTGTTACCAACCAAATCTTCATCACCGCCG
rJMFF001J08-          TCTTCATCATCACCACCGCCATCTTCATGACTGTTACCAACCAAATCTTCATCACCGCCG
rJMFF012D21-          TCTTCATCATCACCACCGCCATCTTCATGACTGTTACCAACCAAATCTTCATCACCGCCG
JMFF027N07+           TCTTCATCATCACCACCGCCATCTTCATGACTGTTACCAACCAAATCTTCATCACCGCCG
JMFF012D21+           TCTTCATCATCACCACCGCCATCTTCATGACTGTTACCAACCAAATCTTCATCACCGCCG
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consensus             TCTTCATCATCACCACCGCCATCTTCATGACTGTTACCAACCAAATCTTCATCACCGCCG
 
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rJMFF027N07-          CCATCTTTATGACTGTTACCAACCAAATCTTCATCATCACCACCGCCATCTTCATGACTG
JMFN020O23+           CCATCTTTATGACTGTTACCAACCAAATGTTCATCATCACCACCGCCATCTTCATGACTG
JMFF001J08+           CCATCTTTATGACTGTTACCAACCAAATCTTCATCATCACCACCGCCATCTTCATGACTG
rJMFF001J08-          CCATCTTTATGACTGTTACCAACCAAATCTTCATCATCACCACCGCCATCTTCATGACTG
rJMFF012D21-          CCATCTTTATGACTGTTACCAACCAAATCTTCATCATCACCACCGCCATCTTCATGACTG
JMFF027N07+           CCATCTTTATGACTGTTACCAACCAAATCTTCATCATCACCACCGCCATCTTCATGACTG
JMFF012D21+           CCATCTTTATGACTGTTACCAACCAAATCTTCATCATCACCACCGCCATCTTCATGACTG
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consensus             CCATCTTTATGACTGTTACCAACCAAATCTTCATCATCACCACCGCCATCTTCATGACTG
 
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rJMFF027N07-          TTACCAACCAAATCTTCATCACCGCCGCCATCTTCATCACTATTACCAACCATATCTTCA
JMFN020O23+           TTACCAACCAAATCTTCATCACCGCCGCCATCTTCATCACTATTACCAACCATATCTTCA
JMFF001J08+           TTACCAACCAAATCTTCATCACCGCCGCCATCTTCATCACTATTACCAACCATATCTTCA
rJMFF001J08-          TTACCAACCAAATCTTCATCACCGCCGCCATCTTCATCACTATTACCAACCATATCTTCA
rJMFF012D21-          TTACCAACCAAATCTTCATCACCGCCGCCATCTTCATCACTATTACCAACCATATCTTCA
JMFF027N07+           TTACCAACCAAATCTTCATCACCGCCGCCATCTTCATCACTATTACCAACCATATCTTCA
JMFF012D21+           TTACCAACCAAATCTTCATCACCGCCGCCATCTTCATCACTATTACCAACCATATCTTCA
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consensus             TTACCAACCAAATCTTCATCACCGCCGCCATCTTCATCACTATTACCAACCATATCTTCA
 
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rJMFF027N07-          TTTTTTACTTTCATGTTTCCTTCCCCACCCTTTAGGGGGGAATGTAAAGGCTCATCACTT
JMFN020O23+           TTTTTTACTTTCATGTTTCCTTCCCCACCCTTTAGGGGGGAATGTAAAGGCTCATCACTT
JMFF001J08+           TTTTTTACTTTCATGTTTCCTTCCCCACCCTTTAGGGGGGAATGTAAAGGCTCATCACTT
rJMFF001J08-          TTTTTTACTTTCATGTTTCCTTCCCCACCCTTTAGGGGGGAATGTAAAGGCTCATCACTT
rJMFF012D21-          TTTTTTACTTTCATGTTTCCTTCCCCACCCTTTAGGGGGGAATGTAAAGGCTCATCACTT
JMFF027N07+           TTTTTTACTTTCATGTTTCCTTCCCCACCCTTTAGGGGGGAATGTAAAGGCTCATCACTT
JMFF012D21+           TTTTTTACTTTCATGTTTCCTTCCCCACCCTTTAGGGGGGAATGTAAAGGCTCATCACTT
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consensus             TTTTTTACTTTCATGTTTCCTTCCCCACCCTTTAGGGGGGAATGTAAAGGCTCATCACTT
 
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rJMFF027N07-          TTAGTATCAACAACTCCTTCACCCAAACTACTTAATGTGGGAGAGGGAAGGGGTCGACTT
JMFN020O23+           TTAGTATCAACAACTCCTTCACCCAAACTACTTAATGTGGGAGAGGGAAGGGGTCGACTT
JMFF001J08+           TTAGTATCAACAACTCCTTCACCCAAACTACTTAATGTGGGAGAGGGAAGGGGTCGACTT
rJMFF001J08-          TTAGTATCAACAACTCCTTCACCCAAACTACTTAATGTG                     
rJMFF012D21-          TTAGTATCAACAACTCCTTCACCCAAACTACTTAATGTGGGAGAGGGAAGGGGTCGACTT
JMFF027N07+           TTAGTATCAACAACTCCTTCACCCAAACTACTTAATGTGGGAGAGGGAAGGGGTCGACTT
JMFF012D21+           TTAGTATCAACAACTCCTTCACCCAAACTACTTAATGTGGGAGAGGGAAGGGGTCGACTT
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consensus             TTAGTATCAACAACTCCTTCACCCAAACTACTTAATGTGGGAGAGGGAAGGGGTCGACTT
 
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rJMFF027N07-          AGGGCTGAGCTAATAAGGGATGATGAAATTAGTAGAAGCATGAAAGCCGCCATGGAAACA
JMFN020O23+           AGGGCTGAGCTAATAAGGGATGATAGAATTAGTAGAAGCATGAAAGCCGCCAT-GAAACA
JMFF001J08+           AGGGCTGAGCTAATAAGGGATGATGAAATTAGTAGAAGCATGAAAGCCGCCATGGAAACA
rJMFF012D21-          ANGGCTGAGCTAATAAGGGATGATGAAATTAGTAGAAGCATGAAAGCCGCCATGGAAACA
JMFF027N07+           AGGGCTGAGCTAATAAGGGATGATGAAATTAGTAGAAGCATGAAAGCCGCCATGGAAACA
JMFF012D21+           AGGGCTGAGCTAATAAGGGATGATGAAATTAGTAGAAGCATGAAAGCCGCCATGGAAACA
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consensus             AGGGCTGAGCTAATAAGGGATGATGAAATTAGTAGAAGCATGAAAGCCGCCATGGAAACA
 
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rJMFF027N07-          CTTTTTGAAGATGCCATAATGTTC                                    
JMFN020O23+           CTTTTTGAAGATGCCATAATGTTCAGTAGTA                             
JMFF001J08+           CTTTTTGAAGATGCCATAATGTTCAGTAGTACTCAGCTAGCTAGTTGAATT         
rJMFF012D21-          CTTTTTGAAGATGCCATAATGTTCAGTAGTACTCAGCTAGCTAGTTGAATTGAAGAT   
JMFF027N07+           CTTTTTGAAGATGCCATAATGTTCAGTAGTACTCAGCTAGCTAGTTGAATTGAAGATGA 
JMFF012D21+           CTTTTTGAAGATGCCATAATGTTCAGTAGTACTCAGCTAGCTAGTTGAATTGAAGATGAT
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consensus             CTTTTTGAAGATGCCATAATGTTCAGTAGTACTCAGCTAGCTAGTTGAATTGAAGATGAT