Contig 005921:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012B05Sequence551005921 (2)ref|XP_009619756.1|2e-23PREDICTED: glucan endo-1,3-beta-glucosidase 12 [Nicotiana tomentosiformis]775002543 (2)emb|CDP02593.1|4e-58unnamed protein product [Coffea canephora]
JMFF028N03Sequence436005921 (2)ref|XP_009619756.1|1e-17PREDICTED: glucan endo-1,3-beta-glucosidase 12 [Nicotiana tomentosiformis]755002543 (2)emb|CDP02593.1|1e-57unnamed protein product [Coffea canephora]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF012B05+                                                            TGAATNTGCAA
                      ____________________________________________________________
consensus                                                              TGAATNTGCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF012B05+           ATAAAGAATCAAACAAGGAAAGCCTTNTGCTTNTGCTTCTGGGTTTTGCTCTTTCCTGCC
                      ____________________________________________________________
consensus             ATAAAGAATCAAACAAGGAAAGCCTTNTGCTTNTGCTTCTGGGTTTTGCTCTTTCCTGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF028N03+                                                       CCAAGATTCTTGATAA
JMFF012B05+           TCTCATTCTCTGCCATTAAATGGATCTTCTTCAGGCTAAAACCTCCAAGATTCTTGATAA
                      ____________________________________________________________
consensus             TCTCATTCTCTGCCATTAAATGGATCTTCTTCAGGCTAAAACCTCCAAGATTCTTGATAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF028N03+           ACTCTGAAATGGACAAATCAGAAGAAGGGGTGACCAAATAAGGCGCATCTATCTCCCTGA
JMFF012B05+           GCTNTGAAATGGACAAATCAGAAGAAGGGGTGACCAAATAAGGCGCATCTATCTCCCTGA
                      ____________________________________________________________
consensus             GCTCTGAAATGGACAAATCAGAAGAAGGGGTGACCAAATAAGGCGCATCTATCTCCCTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF028N03+           AAAACTCAACAACAGGCTTAACATATGTCTNTGCATAGCTCTGGTACTGCAAACAGCTTG
JMFF012B05+           AAAACTCAACAACAGGCTTAACATATGTCTCTGCATAGCTCTGGTACTGCAAACAGCTTG
                      ____________________________________________________________
consensus             AAAACTCAACAACAGGCTTAACATATGTCTCTGCATAGCTCTGGTACTGCAAACAGCTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF028N03+           GGGAGAAAGAAGTTGAGACTTTGATTTCCCCTCCCAAACCCCACCTAGTAAGAGAATAGT
JMFF012B05+           GGGAGAAAGAAGTTGAGACTTTGATTTCCCCTCCCAAACCCCACCTAGTAAGAGAATAGT
                      ____________________________________________________________
consensus             GGGAGAAAGAAGTTGAGACTTTGATTTCCCCTCCCAAACCCCACCTAGTAAGAGAATAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF028N03+           GAATGTTCTTCATGGATGGCAACACCAACCCCACCCTCTCTTCCCCACACAAAAAAACTG
JMFF012B05+           GAATGTTCTTCATGGATGGCAACACCAACCCCACCCTCTCTTCCCCACACAAAAAAACTG
                      ____________________________________________________________
consensus             GAATGTTCTTCATGGATGGCAACACCAACCCCACCCTCTCTTCCCCACACAAAAAAACTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF028N03+           GAACCCCAGAAAAAGCCTGCAGACCCACTGCTTCATCACCATTGACAGCAGCAAAATGGA
JMFF012B05+           GAACCCCAGAAAAAGCCTGCAGACCCACTGCTTCATCACCATTGACAGCAGCAAAATGGA
                      ____________________________________________________________
consensus             GAACCCCAGAAAAAGCCTGCAGACCCACTGCTTCATCACCATTGACAGCAGCAAAATGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF028N03+           GAAGGAAGAGGAGGAAGAAGCAAGAAAGATTGAACATTTTTTGGGGGAAATGGGAAGGGA
JMFF012B05+           GAAGGAAGAGGAGGAAGAAGCAAGAAAGATTGAACATTTTTTGGGGGAAATGGGAAGGGA
                      ____________________________________________________________
consensus             GAAGGAAGAGGAGGAAGAAGCAAGAAAGATTGAACATTTTTTGGGGGAAATGGGAAGGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF028N03+           GAGCACAATGTGGAGATGAAGCTGAAAGCTGAAATTTCTTTGCCATTCTGCACTCTCATT
JMFF012B05+           GAGCACAATGTGGAGATGAAGCTGAAAGCTGAAATTTCTTTGCCATTCTGCACTCTCATT
                      ____________________________________________________________
consensus             GAGCACAATGTGGAGATGAAGCTGAAAGCTGAAATTTCTTTGCCATTCTGCACTCTCATT