| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003I04 | Sequence | 575 | 005920 (4) | ref|XP_006367480.1| | 8e-77 | PREDICTED: ADP,ATP carrier protein 3, mitochondrial-like [Solanum tuberosum] | 744 | 008966 (5) | ref|XP_007043627.1| | 1e-87 | ADP/ATP carrier 3 isoform 1 [Theobroma cacao] ref|XP_007043628.1| ADP/ATP carrie |
| JMFF011N14 | Sequence | 534 | 005920 (4) | ref|XP_006367480.1| | 3e-59 | PREDICTED: ADP,ATP carrier protein 3, mitochondrial-like [Solanum tuberosum] | 737 | 008966 (5) | ref|XP_007043627.1| | 4e-91 | ADP/ATP carrier 3 isoform 1 [Theobroma cacao] ref|XP_007043628.1| ADP/ATP carrie |
| JMFF036M16 | Sequence | 553 | 005920 (4) | ref|XP_006367480.1| | 2e-71 | PREDICTED: ADP,ATP carrier protein 3, mitochondrial-like [Solanum tuberosum] | 743 | 008966 (5) | ref|XP_010689049.1| | 1e-88 | PREDICTED: ADP,ATP carrier protein [Beta vulgaris subsp. vulgaris] ref|XP_010689 |
| JMFF045H24 | Sequence | 646 | 005920 (4) | ref|XP_006367480.1| | 1e-89 | PREDICTED: ADP,ATP carrier protein 3, mitochondrial-like [Solanum tuberosum] | 567 | 008966 (5) | ref|XP_010497666.1| | 5e-37 | PREDICTED: ADP,ATP carrier protein 3, mitochondrial-like, partial [Camelina sat |
This contig is upended
. : . : . : . : . : . :
JMFF003I04+ AGTGGGG
JMFF045H24+ AATTAAAGAGTCGCTTAAAGTAATCTTTGAAGGCAAAGTTGAGTGCCTGAGTGGGG
____________________________________________________________
consensus AATTAAAGAGTCGCTTAAAGTAATCTTTGAAGGCAAAGTTGAGTGCCTGAGTGGGG
. : . : . : . : . : . :
JMFF036M16+ TAACATTTGCTGTATTTCCCCGCCAAAGAGAAAGAGCGCCTTCATCCCTG
JMFF003I04+ AAGTATCTAATAACATTTGCTGTATTTCCCCGCCAAAGAGAAAGAGCGCCTTCATCCCTG
JMFF045H24+ AAGTATCTAATAACATTTGCTGTATTTCCCCGCCAAAGAGAAAGAGCGCCTTCATCCCTG
JMFF011N14+ CCTG
____________________________________________________________
consensus AAGTATCTAATAACATTTGCTGTATTTCCCCGCCAAAGAGAAAGAGCGCCTTCATCCCTG
. : . : . : . : . : . :
JMFF036M16+ ATAGTTCTGGCAAAGCAATCAGAAATCCCCTTGTACGGTTCAGAAAGCCGACCAGCTTTT
JMFF003I04+ ATAGTTCTGGCAAAGCAATCAGAAATCCCCTTGTACGGTTCAGAAAGCCGACCAGCTTTT
JMFF045H24+ ATAGTTCTGGCAAAGCAATCAGAAATCCCCTTGTACGGTTCAGAAAGCCGACCAGCTTTT
JMFF011N14+ ATAGTTCTGGCAAAGCAATCAGAAATCCCCTTGTACGGTTCAGAAAGCGGACCAGCTTTT
____________________________________________________________
consensus ATAGTTCTGGCAAAGCAATCAGAAATCCCCTTGTACGGTTCAGAAAGCCGACCAGCTTTT
. : . : . : . : . : . :
JMFF036M16+ ATCATTTCATCCTGATTCTGAATCAAAAGCTTAACCCTCTCGATCGGAGCAGCAGCAGTC
JMFF003I04+ ATCATTTCATCCTGATTCTGAATCAAAAGCTTAACCCTCTCGATCGGAGCAGCAGCAGTC
JMFF045H24+ ATCATTTCATCCTGATTCTGAATCAAAAGCTTAACCCTCTCGATCGGAGCAGCAGCAGTC
JMFF011N14+ ATCATTTCATCCTGATTCTGAATCAAAAGCTTAACCCTCTCGATCGGAGCAGCAGCAGTC
____________________________________________________________
consensus ATCATTTCATCCTGATTCTGAATCAAAAGCTTAACCCTCTCGATCGGAGCAGCAGCAGTC
. : . : . : . : . : . :
JMFF036M16+ TTAGAGACAGCAGCAGAAACCCCTCCCATGAGGAAATCCACCACAAAACTGGAAGCTTTC
JMFF003I04+ TTAGAGACAGCAGCAGAAACCCCTCCCATGAGGAAATCCACCACAAAACTGGAAGCTTTC
JMFF045H24+ TTAGAGACAGCAGCAGAAACCCCTCCCATGAGGAAATCCACCACAAAACTGGAAGCTTTC
JMFF011N14+ TTAGAGACAGCAGCAGAAACCCCTCCCATGAGGAAATCCACCACAAAACTGGAAGCTTTC
____________________________________________________________
consensus TTAGAGACAGCAGCAGAAACCCCTCCCATGAGGAAATCCACCACAAAACTGGAAGCTTTC
. : . : . : . : . : . :
JMFF036M16+ TTCTCAGATGGAGCCTGTATAAGAATTGGAGACTGCAGCGATAAAATTCCCAGGCCCGCA
JMFF003I04+ TTCTCAGATGGAGCCTGTATAAGAATTGGAGACTGCAGCGATAAAATTCCCAGGCCCGCA
JMFF045H24+ TTCTCAGATGGAGCCTGTATAAGAATTGGAGACTGCAGCGATAAAATTCCCAGGCCCGCA
JMFF011N14+ TTCTCAGATGGAGCCTGTATAAGAATTGGAGACTGCAGCGATAAAATTCCCAGGCCCGCA
____________________________________________________________
consensus TTCTCAGATGGAGCCTGTATAAGAATTGGAGACTGCAGCGATAAAATTCCCAGGCCCGCA
. : . : . : . : . : . :
JMFF036M16+ CCTCGGGTTTCTGGCACCAAACGACTCAGCATTACTTCATTGACATACCCACCAGTCAAA
JMFF003I04+ CCTCGGGTTTCTGGCACCAAACGACTCAGCATTACTTCATTGACATACCCACCAGTCAAA
JMFF045H24+ CCTCGGGTTTCTGGCACCAAACGACTCAGCATTACTTCATTGACATACCCACCAGTCAAA
JMFF011N14+ CCTCGGGTTTCTGGCACCAAACGACTCAGCATTACTTCATTGACATACCCACCAGTCAAA
____________________________________________________________
consensus CCTCGGGTTTCTGGCACCAAACGACTCAGCATTACTTCATTGACATACCCACCAGTCAAA
. : . : . : . : . : . :
JMFF036M16+ TTGTATGACCCAACATACTTGGAATGCATCTGGGGAGAAATCTGAGAGAATAGGAAAGAC
JMFF003I04+ TTGTATGACCCAACATACTTGGAATGCATCTGGGGAGAAATCTGAGAGAATAGGAAAGAC
JMFF045H24+ TTGTATGACCCAACATACTTGGAATGCATCTGGGGAGAAATCTGAGAGAATAGGAAAGAC
JMFF011N14+ TTGTATGACCCAACATACTTGGAATGCATCTGGGGAGAAATCTGAGAGAATAGGAAAGAC
____________________________________________________________
consensus TTGTATGACCCAACATACTTGGAATGCATCTGGGGAGAAATCTGAGAGAATAGGAAAGAC
. : . : . : . : . : . :
JMFF036M16+ TGGCCATGTATTTTCTGAAATACTGGTGCAGTTTGTGAACCATCTGCCATGTTAATCAAT
JMFF003I04+ TGGCCATGTATTTTCTGAAATACTGGTGCAGTTTGTGAACCATCCGCCATGTTAATCAAT
JMFF045H24+ TGGCCATGTATTTTCTGAAATACTGGTGCAGTTTGTGAACCATCTGCCATGTTAATCAAT
JMFF011N14+ TGGCCATGTATTTTCTGAAATACTGGTGCAGTTTGTGAACCATCTGCCATGTTAATCAAT
____________________________________________________________
consensus TGGCCATGTATTTTCTGAAATACTGGTGCAGTTTGTGAACCATCTGCCATGTTAATCAAT
. : . : . : . : . : . :
JMFF036M16+ ATGAAGCAGGC----------CTGAGAGGGCGGCCACTCCAGATAATCGGAGAGGGTGAT
JMFF003I04+ ATGAAGCAGGCCTGCAAATAGCTGAGAGGGCGGCCACTCCAGATAATCGGAGAGGGTGAT
JMFF045H24+ ATGAAGCAGGC----------CTGAGAGGGCGGCCACTCCAGATAATCGGAGAGGGTGAT
JMFF011N14+ ATGAAGCAGGC----------CTGAGAGGGCGGCCACTCCAGATAATCGGAGAGGGTGAT
____________________________________________________________
consensus ATGAAGCAGGC----------CTGAGAGGGCGGCCACTCCAGATAATCGGAGAGGGTGAT
. : . : . : . : . : . :
JMFF036M16+ TCCTACTTCCTAGTTCCTAGTCGAAGTT
JMFF003I04+ TCCTACTTCCTAGTTCCTAGTCGAAGTT
JMFF045H24+ TCCTACTTCCTAGTTCCTAGTCGAAGTTGAGAGGAGAGAAGGACACGACCAGTT
JMFF011N14+ TCCTACTTCCTAGTTCCTAGTCGAAGTTGAGAGGAGAGAAGGACACGACCAGTTTCACTT
____________________________________________________________
consensus TCCTACTTCCTAGTTCCTAGTCGAAGTTGAGAGGAGAGAAGGACACGACCAGTTTCACTT