Contig 005919:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011L11Sequence539005919 (3)ref|XP_009596760.1|5e-21PREDICTED: protein GLUTAMINE DUMPER 2-like [Nicotiana tomentosiformis]306005919 (3)
JMFN043P22Sequence524005919 (3)ref|XP_009596760.1|3e-21PREDICTED: protein GLUTAMINE DUMPER 2-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF011L11-                                                               TAATTCT
                      ____________________________________________________________
consensus                                                                  TAATTCT
 
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rJMFF011L11-          TTGAACATTAATCACTGCAAAAAGAAAAACTTGAAGAGGAAGTTTAAGGATTTGGCTATT
JMFN043P22+                                                        AAGGATTTGGCTATT
                      ____________________________________________________________
consensus             TTGAACATTAATCACTGCAAAAAGAAAAACTTGAAGAGGAAGTTTAAGGATTTGGCTATT
 
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rJMFF011L11-          CTTTTATTTATGCCAAAATTGTTTTTCCATTACTGTAAAAACTGACTGCCGGCCATGATT
JMFN043P22+           CTTTTATTTATGCCAAAATTGTTTTTCCATTACTGTAAAAACTGACTGCCGGCCATGATT
JMFF011L11+            TTTTATTTATGCCAAAATTGTTTTTCCATTACTGTAAAAACTGACTGCCGGCCATGATT
                      ____________________________________________________________
consensus             CTTTTATTTATGCCAAAATTGTTTTTCCATTACTGTAAAAACTGACTGCCGGCCATGATT
 
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rJMFF011L11-          ACATCTATCAACTTTCATCTTCTTAAATACATTTTCATGGATGCTACAGAAACCAAACCA
JMFN043P22+           ACATCTATCAACTTTCATCTTCTTAAATACATTTTCATGGATGCTACAGAAACCAAACCA
JMFF011L11+           ACATCTATCAACTTTCATCTTNTTAAATACATTTTCATGGATGCTACAGAAACCAAACCA
                      ____________________________________________________________
consensus             ACATCTATCAACTTTCATCTTCTTAAATACATTTTCATGGATGCTACAGAAACCAAACCA
 
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rJMFF011L11-          AAAAAAAAACAAGATTACATTCTATGGGGTTATTAAATTCTGGCGGCGTCANATTGATCA
JMFN043P22+           AAAAAAAAACAAGATTACATTCTATGGGGTTATTAGATTCTGGCGGCGTCAGATTGATCA
JMFF011L11+           AAAAAAAAACAAGATTACATTCTATGGGGTTATTAGATTCTGGCGGCGTCAGATTGATCA
                      ____________________________________________________________
consensus             AAAAAAAAACAAGATTACATTCTATGGGGTTATTAGATTCTGGCGGCGTCAGATTGATCA
 
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rJMFF011L11-          CNACGGAGCTTTGTCNATGAAGCTANAAGGAAGGGGAATGGC                  
JMFN043P22+           CGACGGAGCTTTGTCGATGAAGCTAGAAGGAAGGGGAATGGCGAGGTGGGTGGGTTTGGC
JMFF011L11+           CGACGGAGCTTTGTCGATGAAGCTAGAAGGAAGGGGAATGGCGAGGTGGGTGGGTTTGGC
                      ____________________________________________________________
consensus             CGACGGAGCTTTGTCGATGAAGCTAGAAGGAAGGGGAATGGCGAGGTGGGTGGGTTTGGC
 
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JMFN043P22+           GTCGCCGGCCATGACGACGATGAAACTCGGGCTCATCTCCGCGCTTCGGCTCACCGCCGA
JMFF011L11+           GTCGCCGGCCATGACGACGATGAAACTCGGGCTCATCTCCGCGCTTCGGCTCACCGCCGA
                      ____________________________________________________________
consensus             GTCGCCGGCCATGACGACGATGAAACTCGGGCTCATCTCCGCGCTTCGGCTCACCGCCGA
 
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JMFN043P22+           TCCCGATTTCTCGTCACCGTCGGCGCCGCCGGAGGACTGCTTGTGCAGGGAACAAGCCAG
JMFF011L11+           TCCCGATTTCTCGTCACCGTCGGCGCCGCCGGAGGACTGCTTGTGCAGGGAACAAGCCAG
                      ____________________________________________________________
consensus             TCCCGATTTCTCGTCACCGTCGGCGCCGCCGGAGGACTGCTTGTGCAGGGAACAAGCCAG
 
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JMFN043P22+           GACGATGATCGCCACGAGAATGATACCGAACGCTAAACCTAAGCTTATAAATATGTACGG
JMFF011L11+           GACGATGATCGCCACGAGAATGATACCGAACGCTAAACCTAAGCTTATAAATATGTACGG
                      ____________________________________________________________
consensus             GACGATGATCGCCACGAGAATGATACCGAACGCTAAACCTAAGCTTATAAATATGTACGG
 
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JMFN043P22+           CAATGGAGATTTCCACTCCCAGAATGTATTCGACTGCGGCGACCCTGCGCCGCCGTTTGT
JMFF011L11+           CAATGGAGATTTCCACTCCCAGAATGTATTCGACTGCGGCGACCCTGCGCCGCCGTTTGT
                      ____________________________________________________________
consensus             CAATGGAGATTTCCACTCCCAGAATGTATTCGACTGCGGCGACCCTGCGCCGCCGTTTGT
 
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JMFN043P22+           CTGAACCATTTCTCCCCTCATCTCTCTCT                               
JMFF011L11+           CTGAACCATTTCTCCCCTCATCTCTCTCTCTTTCTCTCTCTGTTGCCTTCTAATTTATGT
                      ____________________________________________________________
consensus             CTGAACCATTTCTCCCCTCATCTCTCTCTCTTTCTCTCTCTGTTGCCTTCTAATTTATGT