| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006O04 | Sequence | 621 | 005914 (4) | gb|KJB52135.1| | 9e-97 | hypothetical protein B456_008G247500 [Gossypium raimondii] | 785 | 011107 (4) | ref|XP_009780084.1| | 6e-133 | PREDICTED: signal peptide peptidase-like 2 [Nicotiana sylvestris] |
| JMFF009N22 | Sequence | 544 | 005914 (4) | emb|CDP12033.1| | 5e-71 | unnamed protein product [Coffea canephora] | 251 | 011107 (4) | gb|EYU38342.1| | 7e-12 | hypothetical protein MIMGU_mgv1a004184mg [Erythranthe guttata] |
| JMFF032J02 | Sequence | 528 | 005914 (4) | emb|CDP12033.1| | 1e-66 | unnamed protein product [Coffea canephora] | 688 | 011107 (4) | ref|XP_009780084.1| | 1e-113 | PREDICTED: signal peptide peptidase-like 2 [Nicotiana sylvestris] |
| JMFF033P07 | Sequence | 569 | 005914 (4) | emb|CDP12033.1| | 5e-77 | unnamed protein product [Coffea canephora] | 788 | 011107 (4) | ref|XP_009780084.1| | 6e-133 | PREDICTED: signal peptide peptidase-like 2 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMFF006O04+ TGGAGAGTAAAGCTGCA
____________________________________________________________
consensus TGGAGAGTAAAGCTGCA
. : . : . : . : . : . :
JMFF006O04+ CAGTAACTGATGAATTACTCGATAGCATTTTCTCCAAAGTTGCACCAGCATCTTGGGGAA
____________________________________________________________
consensus CAGTAACTGATGAATTACTCGATAGCATTTTCTCCAAAGTTGCACCAGCATCTTGGGGAA
. : . : . : . : . : . :
JMFF006O04+ GCATGACAGCAGGTATCTTTATATCTAGGTCAGTTTCATCAGGATCACAAACCATCTTGT
JMFF033P07+ AGTTTCATCAGGATCACAAACCATCTTGT
JMFF009N22+ GT
____________________________________________________________
consensus GCATGACAGCAGGTATCTTTATATCTAGGTCAGTTTCATCAGGATCACAAACCATCTTGT
. : . : . : . : . : . :
JMFF006O04+ AAAGTTCTTTTTGGTTGTTTATTATAAGGACTGCTGAAGCCCCAGCAGCTTCTGCATAAT
JMFF033P07+ AAAGTTCTTTTTGGTTGTTTATTATAAGGACTGCTGAAGCCCCAGCAGCTTCTGCATAAT
JMFF032J02+ GGTTGTTTATTATAAGGACTGCTGAAGCCCCAGCAGCTTCTGCATAAT
JMFF009N22+ AAAGTTCTTTTTGGTTGTTTATTATAAGGACTGCTGAAGCCCCAGCAGCTTCTGCATAAT
____________________________________________________________
consensus AAAGTTCTTTTTGGTTGTTTATTATAAGGACTGCTGAAGCCCCAGCAGCTTCTGCATAAT
. : . : . : . : . : . :
JMFF006O04+ TAGCTTTTGCAGTGAATTTGCAGTTTCCTCGATCTACCATGATGACATCTCCAGCAAGCT
JMFF033P07+ TAGCTTTTGCAGTGAATTTGCAGTTTCCTCGATCTACCATGATGACATCTCCAGCAAGCT
JMFF032J02+ TAGCTTTTGCAGTGAATTTGCAGTTTCCTCGATCTACCATGATGACATCCCCAGCAAGCT
JMFF009N22+ TAGCTTTTGCAGTGAATTTGCAGTTTCCTCGATCTACCATGATGACATCTCCAGCAAGCT
____________________________________________________________
consensus TAGCTTTTGCAGTGAATTTGCAGTTTCCTCGATCTACCATGATGACATCTCCAGCAAGCT
. : . : . : . : . : . :
JMFF006O04+ TGTTCTTTGGAGTACTGCAACAGTCTCGAGGGTTTGACCGAGTTAGAAGAGTTTGATGTG
JMFF033P07+ TGTTCTTTGGAGTACTGCAACAGTCTCGAGGGTTTGACCGAGTTAGAAGAGTTTGATGTG
JMFF032J02+ TGTTCTTTGGAGTACTGCAACAGTCTCGAGGGTTTGACCGAGTTAGAAGAGTTTGATGTG
JMFF009N22+ TGTTCTTTGGAGTACTGCAACAGTCTCGAGGGTTTGACCGAGTTAGAAGAGTTTGATGTG
____________________________________________________________
consensus TGTTCTTTGGAGTACTGCAACAGTCTCGAGGGTTTGACCGAGTTAGAAGAGTTTGATGTG
. : . : . : . : . : . :
JMFF006O04+ CATTTTTCTCCTTCGACACAATTGTAGTGCCAAATCTAGCACCAACACCAACAAACTCAG
JMFF033P07+ CATTTTTCTCCTTCGACACAATTGTAGTGCCAAATCTAGCACCAACACCAACAAACTCAG
JMFF032J02+ CATTTTTCTCCTTCGACACAATTGTAGTGCCAAATCTAGCACCAACACCAACAAACTCAG
JMFF009N22+ CATTTTTCTCCTTCGACACAATTGTAGTGCCAAATCTAGCACCAACACCAACAAACTCAG
____________________________________________________________
consensus CATTTTTCTCCTTCGACACAATTGTAGTGCCAAATCTAGCACCAACACCAACAAACTCAG
. : . : . : . : . : . :
JMFF006O04+ CATCTTCTACCCCATCAACCCATGTTTGAATTTTCACCAGCACAAAATCATTCTCACAGC
JMFF033P07+ CATCTTCTACCCCATCAACCCATGTTTGAATTTTCACCAGCACAAAATCATTCTCACAGC
JMFF032J02+ CATCTTCTACCCCATCAACCCATGTTTGAATTTTCACCAGAACAAAATCATTCTCACAGC
JMFF009N22+ CATCTTCTACCCCATCAACCCATGTTTGAATTTTCACCAGCACAAAATCATTCTCACAGC
____________________________________________________________
consensus CATCTTCTACCCCATCAACCCATGTTTGAATTTTCACCAGCACAAAATCATTCTCACAGC
. : . : . : . : . : . :
JMFF006O04+ CGGGCTTTTTGGGGGCTAAATCGTCGTGATGAACAATGTCACCGGCGGTCACTGCAGATG
JMFF033P07+ CGGGCTTTTTGGGGGCTAAATCGTCGTGATGAACAATGTCACCGGCGGTCACTGCAGATG
JMFF032J02+ CGGGCTTTTTGGGGGCTAAATCGTCGTGATGAACAATGTCACCGGCGGTCACTGCAGATG
JMFF009N22+ CGGGCTTTTTGGGGGCTAAATCGTCGTGATGAACAATGTCACCGGCGGTCACTGCAGATG
____________________________________________________________
consensus CGGGCTTTTTGGGGGCTAAATCGTCGTGATGAACAATGTCACCGGCGGTCACTGCAGATG
. : . : . : . : . : . :
JMFF006O04+ GGATGCTGAAGACTACCACCAGCACTGAAACTAGGCAAATTAAGCAGCTAATCTTCCCAA
JMFF033P07+ GGATGCTGAAGACTACCACCAGCACTGAAACTAGGCAAATTAAGCAGCTAATCTTCCCAA
JMFF032J02+ GGATGCTGAAGACTACCACCAGCACTGAAACTAGGCAAATTAAGCAGCTAATCTTCCCAA
JMFF009N22+ GGATGCTGAAGACTACCACCAGCACTGAAACTAGGCAAATTAAGCAGCTAATCTTCCCAA
____________________________________________________________
consensus GGATGCTGAAGACTACCACCAGCACTGAAACTAGGCAAATTAAGCAGCTAATCTTCCCAA
. : . : . : . : . : . :
JMFF006O04+ AATCCATCGGATTTCAGAAGCTCTGTAAATATCAAACGCATACATAAACAGTAAAATT
JMFF033P07+ AATCCATCGGATTTCAGAAGCTCTGTAAATATCAAACGCATACATAAACAGTAAAATTTG
JMFF032J02+ AATCCATCGGATTTCAGAAGCTCTGTAAATATCAAACGCATACATAAACAGTAAAATTCG
JMFF009N22+ AATCCATCGGATTTCAGAAGCTCTGTAAATATCAAACGCATACATAAACAGTAAAATTCG
____________________________________________________________
consensus AATCCATCGGATTTCAGAAGCTCTGTAAATATCAAACGCATACATAAACAGTAAAATTCG
. : . : . : . : . : . :
JMFF033P07+ TGTGTATGTATAGAAAGAGGAAGAATTAAAAAGCACTTCTCCTTCTTCTGTGTCAATAAT
JMFF032J02+ TGTGTATGTATAGAAAGAGGAAGAATTAAAAAGCACTTCTCCTTCTTCTGTGTCAATAAT
JMFF009N22+ TGTGTATGTATAGAAAGAGGAAGAATTAAAAAGCACTTCTCCTTCTTCTGTGTCAATAAT
____________________________________________________________
consensus TGTGTATGTATAGAAAGAGGAAGAATTAAAAAGCACTTCTCCTTCTTCTGTGTCAATAAT