Contig 005907:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008K08Sequence239005907 (4)emb|CDP10238.1|3e-08unnamed protein product [Coffea canephora]570009629 (4)ref|XP_004242593.1|152PREDICTED: transmembrane 9 superfamily member 4 [Solanum lycopersicum]
JMFN010N12Sequence488005907 (4)ref|XP_006343648.1|3e-89PREDICTED: transmembrane 9 superfamily member 4-like [Solanum tuberosum]
JMFN017P07Sequence615005907 (4)ref|XP_006343648.1|4e-112PREDICTED: transmembrane 9 superfamily member 4-like [Solanum tuberosum]
JMFS162F04Sequence604005907 (4)ref|XP_004287134.1|2e-56PREDICTED: transmembrane 9 superfamily member 10-like [Fragaria vesca subsp. ve

Alignment

This contig is upended


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JMFN010N12+                                  CGAGCCGATGCGTACCCAGCAAACACACCCATAAATG
                      ____________________________________________________________
consensus                                    CGAGCCGATGCGTACCCAGCAAACACACCCATAAATG
 
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JMFN010N12+           CCCACAAAATAAGCATAGCAGTCATCAATCCTCCACGGTTAGAAGGCGATAAGAATCCAA
                      ____________________________________________________________
consensus             CCCACAAAATAAGCATAGCAGTCATCAATCCTCCACGGTTAGAAGGCGATAAGAATCCAA
 
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JMFN010N12+           GAGCAGCAAATATCATAGTCACTAGTGTCATGCACAAGAACTGAACTCCAGTTCCAACAT
JMFN017P07+                                                          CCAGTTCCAACAT
                      ____________________________________________________________
consensus             GAGCAGCAAATATCATAGTCACTAGTGTCATGCACAAGAACTGAACTCCAGTTCCAACAT
 
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JMFN010N12+           ATACACATAGCAAATCCGAGTTTGTTGGAGCCCTGAAGACATCGCCATGGACCAGCTTCC
JMFN017P07+           ATACACATAGCAAAT-CGAGTTGTTTGGAGCCCTGAAGACATCGCCATGGACCAGCTTCC
                      ____________________________________________________________
consensus             ATACACATAGCAAATCCGAGTTTTTTGGAGCCCTGAAGACATCGCCATGGACCAGCTTCC
 
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JMFN010N12+           ATCCCGTTTCTTCTTGAGCTTCTTCCTGGGTCTCCAATTGGTTGTATTTCGAGATATCAC
JMFN017P07+           ATCCCGTTTCTTCTTGAGCTTCTTCCTGGGTCTCCAATTGGTTGTATTTCGAGATATCAC
                      ____________________________________________________________
consensus             ATCCCGTTTCTTCTTGAGCTTCTTCCTGGGTCTCCAATTGGTTGTATTTCGAGATATCAC
 
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JMFN010N12+           GGTAGAGAGTTCGCAACATGATCATTGCCACCATTCCCGATAGGAAAAGTACGATCATCA
JMFN017P07+           GGTAGAGAGTTCGCAACATGATCATTGCCACCATTCCCGATAGGAAAAGTACGATCATCA
                      ____________________________________________________________
consensus             GGTAGAGAGTTCGCAACATGATCATTGCCACCATTCCCGATAGGAAAAGTACGATCATCA
 
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JMFN010N12+           AAGAATTTACAATCGAGAACCAGTGAATCTGATCATCAGCCATTAGAAGATAGGAGTCCC
JMFN017P07+           AAGAATTTACAATCGAGAACCAGTGAATCTGATCATCAGCCATTAGAAGATAGGAGTCCC
                      ____________________________________________________________
consensus             AAGAATTTACAATCGAGAACCAGTGAATCTGATCATCAGCCATTAGAAGATAGGAGTCCC
 
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JMFN010N12+           ATCTGGATGCCCACTTGATATCACTCTCCTCAAACTTAACATCGTATGTGAAGATTATTT
JMFN017P07+           ATCTGGATGCCCACTTGATATCACTCTCCTCAAACTTAACATCGTATGTGAAGATTATTT
                      ____________________________________________________________
consensus             ATCTGGATGCCCACTTGATATCACTCTCCTCAAACTTAACATCGTATGTGAAGATTATTT
 
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JMFN010N12+           CCTTGTTTTCTTCAACCTCTTGGGGA                                  
JMFN017P07+           CCTTGTTTTCTTCAACCTCTTGGGGAGAATCAGAGCTTGTAACAGTGCGTTTAGCGTTGA
                      ____________________________________________________________
consensus             CCTTGTTTTCTTCAACCTCTTGGGGAGAATCAGAGCTTGTAACAGTGCGTTTAGCGTTGA
 
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JMFN017P07+           CATCACACGTTTTCAGCTGTGTATTGTCTTTCCATTTCCCGTCATATTCATGTTTCACGC
                      ____________________________________________________________
consensus             CATCACACGTTTTCAGCTGTGTATTGTCTTTCCATTTCCCGTCATATTCATGTTTCACGC
 
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JMFN017P07+           TGAAAGGCTTGACTTCAAATCCAACAATTCTTGCAGCATCTGTTTGTTCATCCTTGTGAA
                      ____________________________________________________________
consensus             TGAAAGGCTTGACTTCAAATCCAACAATTCTTGCAGCATCTGTTTGTTCATCCTTGTGAA
 
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JMFN017P07+           ACTTAACCGTGAATGCCAAGTGGTTGTGGATGAAAAACTTTTCCTCTTTGCTTCCAGCAT
                      ____________________________________________________________
consensus             ACTTAACCGTGAATGCCAAGTGGTTGTGGATGAAAAACTTTTCCTCTTTGCTTCCAGCAT
 
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JMFN017P07+           ATTGTCCTTTCAAACCAACATGAAATCCATGTTGATAGACAATAGAGTCCAGATCTGGCC
JMFS162F04+                       AACCAACATGAAATCCATGTTGATAGACAATAGAGTCCAGATCTGGCC
                      ____________________________________________________________
consensus             ATTGTCCTTTCAAACCAACATGAAATCCATGTTGATAGACAATAGAGTCCAGATCTGGCC
 
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JMFN017P07+           TCT                                                         
JMFS162F04+           TCTTTATGGGCATCACTAGTGGAAGATTATCCAAAATCATATTCACCCGATACTCATCGT
                      ____________________________________________________________
consensus             TCTTTATGGGCATCACTAGTGGAAGATTATCCAAAATCATATTCACCCGATACTCATCGT
 
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JMFS162F04+           CTATCTTCTCCTTAAACTCTTTAGCCGCTTTTGCATCAAGAACAATACGGCATGCAACTT
                      ____________________________________________________________
consensus             CTATCTTCTCCTTAAACTCTTTAGCCGCTTTTGCATCAAGAACAATACGGCATGCAACTT
 
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JMFS162F04+           TGCATGTTTCTTGTTCCCTCATATGAAACTGCATACAACAACCTCACTTAGAAGTTAGAA
                      ____________________________________________________________
consensus             TGCATGTTTCTTGTTCCCTCATATGAAACTGCATACAACAACCTCACTTAGAAGTTAGAA
 
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JMFS162F04+           CTTAGTTTCCATGCTTCAGAACTAAGAAGTTACAGTGTAATAGGGATCAAATTTCATTAT
                      ____________________________________________________________
consensus             CTTAGTTTCCATGCTTCAGAACTAAGAAGTTACAGTGTAATAGGGATCAAATTTCATTAT
 
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JMFS162F04+           GCCTGTTTCTCTTATTTTACAACAAAATTAACTAACCTCAAAAACAGAGTTCTCAATACG
                      ____________________________________________________________
consensus             GCCTGTTTCTCTTATTTTACAACAAAATTAACTAACCTCAAAAACAGAGTTCTCAATACG
 
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JMFS162F04+           ATCACCACGAAGAACTTCACCAAGATTCTCCGCACTGTCCACAATGTGGCCTGGCTTGCA
                      ____________________________________________________________
consensus             ATCACCACGAAGAACTTCACCAAGATTCTCCGCACTGTCCACAATGTGGCCTGGCTTGCA
 
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JMFS162F04+           GTAAGGAAGGGAGTAGAACGAATAGGGAAGTTGAGTTTTAGTAGAGGTCAGTTTGTTCAC
                      ____________________________________________________________
consensus             GTAAGGAAGGGAGTAGAACGAATAGGGAAGTTGAGTTTTAGTAGAGGTCAGTTTGTTCAC
 
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JMFS162F04+           TTTCACTTTCAAAGGATCACCCTGTTTGAAATCTTGGGGAGCGACACCAGGGAGGTAGAA
JMFF008K08+            TTCACTTTCAAAGGATCACCCTGTTTGAAATCTTGGGGAGNGACACCAGGGAGGTAGAA
                      ____________________________________________________________
consensus             TTTCACTTTCAAAGGATCACCCTGTTTGAAATCTTGGGGAGCGACACCAGGGAGGTAGAA
 
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JMFS162F04+           AGAGTGAACCTTGGAGAAGAAACACAAGGAGAAGAAGAAGCAGACAGAGATCCATGGCGG
JMFF008K08+           AGAGTGAACCTTGGAGAAGAAACACAAGGAGAAGAAGAAGCAGACAGAGATCCATGGCGG
                      ____________________________________________________________
consensus             AGAGTGAACCTTGGAGAAGAAACACAAGGAGAAGAAGAAGCAGACAGAGATCCATGGCGG
 
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JMFS162F04+           AATCAACTGAGGTCTT                                            
JMFF008K08+           AATCAACTGAGGTCTTGCAACCTCCATGGCTTACAACTCTCACCTCAAACTAATCCTTCA
                      ____________________________________________________________
consensus             AATCAACTGAGGTCTTGCAACCTCCATGGCTTACAACTCTCACCTCAAACTAATCCTTCA
 
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JMFF008K08+           AGATCTAGATCTTCTCCTCTCACCCTTTCTCTTTCTAAAACTATCTCTCTCTCTCTATAT
                      ____________________________________________________________
consensus             AGATCTAGATCTTCTCCTCTCACCCTTTCTCTTTCTAAAACTATCTCTCTCTCTCTATAT