Contig 005885:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003I15Sequence613005885 (5)ref|XP_006341549.1|3e-60PREDICTED: T-complex protein 1 subunit delta-like [Solanum tuberosum]782012458 (3)ref|XP_009797191.1|1e-147PREDICTED: T-complex protein 1 subunit delta [Nicotiana sylvestris]
JMFF047D23Sequence612005885 (5)ref|XP_009797191.1|2e-78PREDICTED: T-complex protein 1 subunit delta [Nicotiana sylvestris]638012458 (3)gb|AAY41425.1|6e-63putative cytosolic chaperonin delta subunit [Ipomoea batatas]
JMSF004O05Sequence262005885 (5)emb|CBI15515.3|1e-04unnamed protein product [Vitis vinifera]213007059 (3)
JMSF045G01Sequence710005885 (5)ref|XP_009797191.1|6e-88PREDICTED: T-complex protein 1 subunit delta [Nicotiana sylvestris]819012458 (3)ref|XP_006341549.1|6e-127PREDICTED: T-complex protein 1 subunit delta-like [Solanum tuberosum]
JMSF046E06Sequence759005885 (5)ref|XP_009797191.1|8e-99PREDICTED: T-complex protein 1 subunit delta [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF046E06+ AAA
                      ____________________________________________________________
consensus AAA
 
. : . : . : . : . : . :
JMSF046E06+ ACCAAACCCTTTACCATCTCAGTATCATCAACCGTACCACCCAATTTCTTCACAATCTTA
JMSF045G01+ CTTCACAATCTTA
                      ____________________________________________________________
consensus ACCAAACCCTTTACCATCTCAGTATCATCAACCGTACCACCCAATTTCTTCACAATCTTA
 
. : . : . : . : . : . :
JMSF046E06+ ATATCTCTTAAATCTACAAGGTCTGGTTTTGCAGGGTCAACAACAGAAAGCACAGAATCA
JMFF047D23+ AGGGTCAACAACAGAAAGCACAGAATCA
JMSF045G01+ ATATCTCTTAAATCTACAAGGTCTGGTTTTGCAGGGTCAACAACAGAAAGCACAGAATCA
                      ____________________________________________________________
consensus ATATCTCTTAAATCTACAAGGTCTGGTTTTGCAGGGTCAACAACAGAAAGCACAGAATCA
 
. : . : . : . : . : . :
JMSF046E06+ ACAGCTAATGGAGCTAAAAGAGTTGAATACTGAGACACTACCTTACTGTTCAGCGCAGTA
JMFF047D23+ ACAGCTAATGGAGCTAAAAGAGTTGAATACTGAGACACTACCTTACTGTTCAGCGCAGTA
JMSF045G01+ ACAGCTAATGGAGCTAAAAGAGTTGAATACTGAGACACTACCTTACTGTTCAGCGCAGTA
JMFF003I15+ GTTCAGCGCAGTA
                      ____________________________________________________________
consensus ACAGCTAATGGAGCTAAAAGAGTTGAATACTGAGACACTACCTTACTGTTCAGCGCAGTA
 
. : . : . : . : . : . :
JMSF046E06+ CTGGCCGATTTGATAAGCGAATCGCGGTCAGAGAGCTCAACAGGAATCGCCATAGCGGTA
JMFF047D23+ CTGGCCGATTTGATAAGCGAATCGCGGTCAGAGAGCTCAACAGGAATCGCCATAGCGGTA
JMSF045G01+ CTGGCCGATTTGATAAGCGAATCGCGGTCAGAGAGCTCAACAGGAATCGCCATAGCGGTA
JMFF003I15+ CTGGCCGATTTGATAAGCGAATCGCGGTCAGAGAGCTCAACAGGAATCGCCATAGCGGTA
                      ____________________________________________________________
consensus CTGGCCGATTTGATAAGCGAATCGCGGTCAGAGAGCTCAACAGGAATCGCCATAGCGGTA
 
. : . : . : . : . : . :
JMSF046E06+ AGGACCTCAACAGCCTTGATAGAAGTCTTATGGAGCGATTCGGAGACAATAGTAGGATGG
JMFF047D23+ AGGACCTCAACAGCCTTGATAGAAGTCTTATGGAGCGATTCGGAGACAATAGTAGGATGG
JMSF045G01+ AGGACCTCAACAGCCTTGATAGAAGTCTTATGGAGCGATTCGGAGACAATAGTAGGATGG
JMFF003I15+ AGGACCTCAACAGCCTTGATAGAAGTCTTATGGAGCGATTCGGAGACAATAGTAGGATGG
                      ____________________________________________________________
consensus AGGACCTCAACAGCCTTGATAGAAGTCTTATGGAGCGATTCGGAGACAATAGTAGGATGG
 
. : . : . : . : . : . :
JMSF046E06+ ATACCTGCTGAAAGAAGGGATAGGCATTGCTTTAGGAGAGCACCAGCAATGACGACGACG
JMFF047D23+ ATACCTGCTGAAAGAAGGGATAGGCATTGCTTTAGGAGAGCACCAGCAATGACGACGACG
JMSF045G01+ ATACCTGCTGAAAGAAGGGATAGGCATTGCTTTAGGAGAGCACCAGCAATGACGACGACG
JMFF003I15+ ATACCTGCTGAAAGAAGGGATAGGCATTGCTTTAGGAGAGCACCAGCAATGACGACGACG
                      ____________________________________________________________
consensus ATACCTGCTGAAAGAAGGGATAGGCATTGCTTTAGGAGAGCACCAGCAATGACGACGACG
 
. : . : . : . : . : . :
JMSF046E06+ GTGGTAGTGCCGTCACCGGCGACGACGTCCTGCGATTTGGAGAGCTCAACGAGGAACTTC
JMFF047D23+ GTGGTAGTGCCGTCACCGGCGACGACGTCCTGCGATTTGGAGAGCTCAACGAGGAACTTC
JMSF045G01+ GTGGTAGTGCCGTCACCGGCGACGACGTCCTGCGATTTGGAGAGCTCAACGAGGAACTTC
JMFF003I15+ GTGGTAGTGCCGTCACCGGCGACGACGTCCTGCGATTTGGAGAGCTCAACGAGGAACTTC
                      ____________________________________________________________
consensus GTGGTAGTGCCGTCACCGGCGACGACGTCCTGCGATTTGGAGAGCTCAACGAGGAACTTC
 
. : . : . : . : . : . :
JMSF046E06+ GCGGCAGGTTGGAGGACTTCCATCTTGTTAAGGATGGTGGCGCCATCGTTGGTGATGATG
JMFF047D23+ GCGGCAGGTTGGAGGACTTCCATCTTGTTAAGGATGGTGGCGCCATCGTTGGTGATGATG
JMSF045G01+ GCGGCAGGTTGGAGGACTTCCATCTTGTTAAGGATGGTGGCGCCATCGTTGGTGATGATG
JMFF003I15+ GCGGCAGGTTGGAGGACTTCCATCTTGTTAAGGATGGTGGCGCCATCGTTGGTGATGATG
                      ____________________________________________________________
consensus GCGGCAGGTTGGAGGACTTCCATCTTGTTAAGGATGGTGGCGCCATCGTTGGTGATGATG
 
. : . : . : . : . : . :
JMSF046E06+ ACCTCGCCATTGGCCGTGGAGATCATCTTGTCCATTCCTTTGGGGCCAAGACTAGTCCGG
JMFF047D23+ ACCTCGCCATTGGCCGTGGAGATCATCTTGTCCATTCCTTTGGGGCCAAGACTAGTCCGG
JMSF045G01+ ACCTCGCCATTGGCCGTGGAGATCATCTTGTCCATTCCTTTGGGGCCAAGACTAGTCCGG
JMSF004O05+ GCCGTGGAGATCATCTTGTCCATTCCTTTGGGGCCAAGACTAGTCCGG
JMFF003I15+ ACCTCGCCATTGGCCGTGGAGATCATCTTGTCCATTCCTTTGGGGCCAAGACTAGTCCGG
                      ____________________________________________________________
consensus ACCTCGCCATTGGCCGTGGAGATCATCTTGTCCATTCCTTTGGGGCCAAGACTAGTCCGG
 
. : . : . : . : . : . :
JMSF046E06+ ACGGCATCGGCCACCGCACGAGCCGCCGCGATGTTGGCCATGCGGATATCGTCCTTGCGC
JMFF047D23+ ACGGCATCGGCCACCGCACGAGCCGCCGCGATGTTGGCCATGCGGATATCGTCCTTGCGC
JMSF045G01+ ACGGCATCGGCCACCGCACGAGCCGCCGCGATGTTGGCCATGCGGATATCGTCCTTGCGC
JMSF004O05+ ACGGCATCGGCCACCGCACGAGCCGCCGCGATGTTGGCCATGCGGATATCGTCCTTGCGC
JMFF003I15+ ACGGCATCGGCCACCGCACGAGCCGCCGCGATGTTGGCCATGCGGATATCGTCCTTGCGC
                      ____________________________________________________________
consensus ACGGCATCGGCCACCGCACGAGCCGCCGCGATGTTGGCCATGCGGATATCGTCCTTGCGC
 
. : . : . : . : . : . :
JMSF046E06+ TTGTTGTCCATGAAGGTTTCCGTCTTCGATGAGGACCCGGCGGCGCCTGGGGCAGCGACT
JMFF047D23+ TTGTTGTCCATGAAGGTTTCCGTCTTCGATGAGGACCCGGCGGCGCCTGGGGCAGCGACT
JMSF045G01+ TTGTTGTCCATGAAGGTTTCCGTCTTCGATGAGGACCCGGCGGCGCCTGGGGCAGCGACT
JMSF004O05+ TTGTTGTCCATGAAGGTTTCCGTCTTCGATGAGGACCCGGCGGCGCCTGGGGCAGCGACT
JMFF003I15+ TTGTTGTCCATGAAGGTTTCCGTCTTCGATGAGGACCCGGCGGCGCCTGGGGCAGCGACT
                      ____________________________________________________________
consensus TTGTTGTCCATGAAGGTTTCCGTCTTCGATGAGGACCCGGCGGCGCCTGGGGCAGCGACT
 
. : . : . : . : . : . :
JMSF046E06+ ACTGCTGGAGATGCCATTGTAGATCGAGAAACTTCTGATCTCACACTTGAGAGAGAGTGA
JMFF047D23+ ACTGCTGGAGATGCCATTGTAGATCGAGAAACTTCTGATCTCAC
JMSF045G01+ ACTGCTGGAGATGCCATTGTAGATCGAGAAACTTCTGATCTCACACTTGAGAGAGAGTGA
JMSF004O05+ ACTGCTGGAGATGCCATTGTAGATCGAGAAACTTCTGATCTCACACTTGAGAGAGAGTGA
JMFF003I15+ ACTGCTGGAGATGCCATTGTAGATCGAGAAACTTCTGATCTCACACTTGAGAGAGAGTGA
                      ____________________________________________________________
consensus ACTGCTGGAGATGCCATTGTAGATCGAGAAACTTCTGATCTCACACTTGAGAGAGAGTGA
 
. : . : . : . : . : . :
JMSF046E06+ TAGTGGAAAAATGAGGCAGAAGTGCAAAACCC
JMSF045G01+ TAGTGGAAAAATGAGGCAGAAGTGCAAAACCC
JMSF004O05+ TAGTGGAAAAATGAGGCAGAAGTGCAAAACCC
JMFF003I15+ TAGTGGAAAAATGAGGCAGAAGTGCAAAACCCTAGCACTGAGAAAAGTCGAAAACAATCT
                      ____________________________________________________________
consensus TAGTGGAAAAATGAGGCAGAAGTGCAAAACCCTAGCACTGAGAAAAGTCGAAAACAATCT