Contig 005882:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003A09Sequence390005882 (2)703012216 (2)ref|XP_009608477.1|6e-85PREDICTED: uncharacterized protein LOC104102469 isoform X3 [Nicotiana tomentosi
JMFF011A19Sequence141005882 (2)732012216 (2)ref|XP_009608477.1|8e-93PREDICTED: uncharacterized protein LOC104102469 isoform X3 [Nicotiana tomentosi

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF003A09+ AANAACTTTCTCNNTACAATGGAGACGAAT
                      ____________________________________________________________
consensus AANAACTTTCTCNNTACAATGGAGACGAAT
 
. : . : . : . : . : . :
JMFF003A09+ ATCACCCATATATGCGCAGGGTCCTCCCCATCTCCATCGCCACCGCCACCGCCGTCGCCG
                      ____________________________________________________________
consensus ATCACCCATATATGCGCAGGGTCCTCCCCATCTCCATCGCCACCGCCACCGCCGTCGCCG
 
. : . : . : . : . : . :
JMFF003A09+ TCGCCGTCGTAACCAGAAACACCCTGGAGTTCTTTCCTGATGATCCCATAAGAGGAACTT
                      ____________________________________________________________
consensus TCGCCGTCGTAACCAGAAACACCCTGGAGTTCTTTCCTGATGATCCCATAAGAGGAACTT
 
. : . : . : . : . : . :
JMFF003A09+ TGAAGAAATTTAGCGCCGCTTTGTTTGTCCCCCAATACACAAATCTTAAGGCATCCCAAA
                      ____________________________________________________________
consensus TGAAGAAATTTAGCGCCGCTTTGTTTGTCCCCCAATACACAAATCTTAAGGCATCCCAAA
 
. : . : . : . : . : . :
JMFF011A19+ CCCCGCCGCCGTTACCTTCCA
JMFF003A09+ TCCCTCCATTCTCAGGCTTGACTATCAAGAACCTAAACTCCCCGCCGCCGTTACCTTCCA
                      ____________________________________________________________
consensus TCCCTCCATTCTCAGGCTTGACTATCAAGAACCTAAACTCCCCGCCGCCGTTACCTTCCA
 
. : . : . : . : . : . :
JMFF011A19+ TTCCCAGTAAAAGAACACCTCTACACGGTGGCCACTCCGCCCCTTTTTAGAAAGATACAA
JMFF003A09+ TTCCCAGTAAAAGAACACCTCTACACGGTGGCCACTCCGCCCCTTTTTAGAAAGATACAA
                      ____________________________________________________________
consensus TTCCCAGTAAAAGAACACCTCTACACGGTGGCCACTCCGCCCCTTTTTAGAAAGATACAA
 
. : . : . : . : . : . :
JMFF011A19+ ACTTCGTTGAGCTTCAGATACAATTCACTCAACTGAACCAGATAAAAATGCATATT
JMFF003A09+ ACTTCGTTGAGCTTCAGATACAATTCACTCAACTGAACCAGATAAAAATGCATATTTGAT
                      ____________________________________________________________
consensus ACTTCGTTGAGCTTCAGATACAATTCACTCAACTGAACCAGATAAAAATGCATATTTGAT