Contig 005871:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP020E05Sequence611005871 (2)gb|KJB39570.1|5e-19hypothetical protein B456_007G020000 [Gossypium raimondii]
JMFF042C03Sequence656005871 (2)ref|XP_004240971.1|4e-11PREDICTED: GTPase-activating protein GYP7-like [Solanum lycopersicum]579019159ref|XP_009796901.1|5e-63PREDICTED: small G protein signaling modulator 2-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF042C03-                ATAAACATATATACATATGATATGAAAGCTGTTTGAAATGAAGGCAGTCGCTGTT
                      ____________________________________________________________
consensus                  ATAAACATATATACATATGATATGAAAGCTGTTTGAAATGAAGGCAGTCGCTGTT
 
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JMFF042C03-           ATGGTGGAAAATCCATCCGGCGTGATTTGCGGCAGCTGAGCTCCGGAGTATAATCGGCAT
                      ____________________________________________________________
consensus             ATGGTGGAAAATCCATCCGGCGTGATTTGCGGCAGCTGAGCTCCGGAGTATAATCGGCAT
 
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JMFF042C03-           TCTCGATGATCATCTCCGGTGCTTCTCCTAGTGTTGTTGGGGAAATCTGCTGCAGTATCA
                      ____________________________________________________________
consensus             TCTCGATGATCATCTCCGGTGCTTCTCCTAGTGTTGTTGGGGAAATCTGCTGCAGTATCA
 
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JMFF042C03-           GTAAGCTCGGCGGAGTTATCATAGCTCCGGCGGCGGCGGCGGCTTCCGGAATGGCCCAAG
                      ____________________________________________________________
consensus             GTAAGCTCGGCGGAGTTATCATAGCTCCGGCGGCGGCGGCGGCTTCCGGAATGGCCCAAG
 
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JMFF042C03-           TGTTCCGAATGCCGGTGGGCTTGTCTTGACTGGCGACGTCTTCTATACTACTAGGTAAAG
                      ____________________________________________________________
consensus             TGTTCCGAATGCCGGTGGGCTTGTCTTGACTGGCGACGTCTTCTATACTACTAGGTAAAG
 
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JMFF042C03-           AACAAGGGGAATGGTGACAGTAAATTACACGGGAAGTCTGAGAATTTACGTGTGAACCCT
                      ____________________________________________________________
consensus             AACAAGGGGAATGGTGACAGTAAATTACACGGGAAGTCTGAGAATTTACGTGTGAACCCT
 
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JMFF042C03-           AGAGTACTGTAGATTATTAATTATTTTCTGACAAAGTAGAAGTAGATGAAAGCTCTTAAA
                      ____________________________________________________________
consensus             AGAGTACTGTAGATTATTAATTATTTTCTGACAAAGTAGAAGTAGATGAAAGCTCTTAAA
 
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JMFF042C03-           CGAAGTAAGACTTCGTCGGCTTCGGATTCCTCTTCACCGTCTTCATCGATATCGTGGATT
                      ____________________________________________________________
consensus             CGAAGTAAGACTTCGTCGGCTTCGGATTCCTCTTCACCGTCTTCATCGATATCGTGGATT
 
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JMFF042C03-           CATTTGAGATCGATTCTGTTCGTTGTAGCATCCTCCTCGCCAGCTTCTTGTTCTTACTCT
                      ____________________________________________________________
consensus             CATTTGAGATCGATTCTGTTCGTTGTAGCATCCTCCTCGCCAGCTTCTTGTTCTTACTCT
 
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JMFF042C03-           GATCGGGCCCATCTTAAATCGCCATGGTCTCACAGAAAACGAAAGCGTGCCCTTTCACTC
rJMCP020E05+              GGGCCCATCTTAAATCGCCATGGTCTCACAGAAAACGAAAGCGTGCCCTTTCACTC
                      ____________________________________________________________
consensus             GATCGGGCCCATCTTAAATCGCCATGGTCTCACAGAAAACGAAAGCGTGCCCTTTCACTC
 
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JMFF042C03-           CGACGGTGGAGAAGCCTTTTCACACCCGATGGAAGACTTGGAGATGGTGGAGTTAAATTT
rJMCP020E05+          CGACGGTGGAGAAGCCTTTTCACACCCGATGGAAGACTTGGAGATGGTGGAGTTAAATTT
                      ____________________________________________________________
consensus             CGACGGTGGAGAAGCCTTTTCACACCCGATGGAAGACTTGGAGATGGTGGAGTTAAATTT
 
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JMFF042C03-           C                                                           
rJMCP020E05+          CTGAAAAAAGTCCGGAGTGGAGTGAGTCCTTGCACAACTTTGAGGTGTTCAATTTTTTAT
                      ____________________________________________________________
consensus             CTGAAAAAAGTCCGGAGTGGAGTGAGTCCTTGCACAACTTTGAGGTGTTCAATTTTTTAT
 
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rJMCP020E05+          GGGATCAACAACTCTAATGTTTGTCGACTATTTGCCTGACCATGTTATGCAGGGTGTTGA
                      ____________________________________________________________
consensus             GGGATCAACAACTCTAATGTTTGTCGACTATTTGCCTGACCATGTTATGCAGGGTGTTGA
 
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rJMCP020E05+          ACCTAGTATCAGGGCAGAAGTTTGGCCGTTCCTACTGGGAGTGTAAGTTTCATTGTTTTT
                      ____________________________________________________________
consensus             ACCTAGTATCAGGGCAGAAGTTTGGCCGTTCCTACTGGGAGTGTAAGTTTCATTGTTTTT
 
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rJMCP020E05+          TTGTGACATTCCTTCTGCATTTAAATAGTCCTTTATTTTTCTCGCATTGAAGTGGGAGGG
                      ____________________________________________________________
consensus             TTGTGACATTCCTTCTGCATTTAAATAGTCCTTTATTTTTCTCGCATTGAAGTGGGAGGG
 
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rJMCP020E05+          AAATTCCATTATCCCTGATTTTTCTTGAATTCAACATTATGTTTTTATGCCTTTAACTTT
                      ____________________________________________________________
consensus             AAATTCCATTATCCCTGATTTTTCTTGAATTCAACATTATGTTTTTATGCCTTTAACTTT
 
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rJMCP020E05+          GTTTCTGCTGCAGCTTTGATTTGAACAGTTCTAAAGAAGAAAGAGACTCTATAAGATGCC
                      ____________________________________________________________
consensus             GTTTCTGCTGCAGCTTTGATTTGAACAGTTCTAAAGAAGAAAGAGACTCTATAAGATGCC
 
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rJMCP020E05+          AGAAAAGGTACCGCTGCTGATTTCAATACTCTTAATTGTGCACCACCAAACACCCCCTTC
                      ____________________________________________________________
consensus             AGAAAAGGTACCGCTGCTGATTTCAATACTCTTAATTGTGCACCACCAAACACCCCCTTC