| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMCP016A04 | Sequence | 558 | 005869 (9) | ||||||||
| JMCP016E11 | Sequence | 558 | 005869 (9) | ||||||||
| JMFF005L01 | Sequence | 276 | 003847 (4) | ref|XP_006350764.1| | 8e-12 | PREDICTED: putative E3 ubiquitin-protein ligase XBAT31-like [Solanum tuberosum] | 716 | 005869 (9) | ref|XP_009618898.1| | 2e-16 | PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform |
| JMFF048I03 | Sequence | 288 | 016335 | 161 | 005869 (9) | ||||||
| JMSF032D14 | Sequence | 710 | 013496 (5) | ref|XP_009618898.1| | 2e-127 | PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform | 793 | 005869 (9) | ref|XP_009618898.1| | 9e-39 | PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform |
| JMSF036L12 | Sequence | 709 | 013496 (5) | ref|XP_009618898.1| | 9e-127 | PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform | 790 | 005869 (9) | ref|XP_009618898.1| | 3e-38 | PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform |
| JMSF039K20 | Sequence | 675 | 013496 (5) | ref|XP_009618898.1| | 1e-108 | PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform | 301 | 005869 (9) | ref|NP_001265923.1| | 1e-12 | Hop-interacting protein THI012 [Solanum lycopersicum] gb|AEW69785.1| Hop-interac |
| JMSF043C10 | Sequence | 828 | 003847 (4) | ref|XP_009618898.1| | 2e-113 | PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform | 671 | 005869 (9) | gb|EYU36266.1| | 1e-12 | hypothetical protein MIMGU_mgv1a008790mg [Erythranthe guttata] |
| JMSF050D14 | Sequence | 710 | 013496 (5) | ref|XP_009618898.1| | 1e-126 | PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform | 812 | 005869 (9) | ref|XP_009618898.1| | 1e-30 | PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform |
This contig is upended
. : . : . : . : . : . :
rJMSF036L12+ TGCCATAA
rJMSF032D14+ TGNGGGCATCAGATGTGCGCACAATGTGTGCTCGCTTTGTGTTGCCATAA
rJMSF050D14+ TGCCATAA
____________________________________________________________
consensus TGNGGGCATCAGATGTGCGCACAATGTGTGCTCGCTTTGTGTTGCCATAA
. : . : . : . : . : . :
rJMSF036L12+ CAAACCGAACCCGACCACGACCGTAACCGCTGCACCTTTGTGCCCTTTCTGCCGAAGCAG
rJMSF032D14+ CAAACCGAACCCGACCACGACCGTAACCGCTGCACCTTTGTGCCCTTTCTGCCGAAGCAG
rJMFF005L01+ GAAGCAG
rJMSF050D14+ CAAACCGAACCCGACCACGACCGTAACCGCTGCACCTTTGTGCCCTTTCTGCNGAAGCAG
____________________________________________________________
consensus CAAACCGAACCCGACCACGACCGTAACCGCTGCACCTTTGTGCCCTTTCTGCCGAAGCAG
. : . : . : . : . : . :
rJMSF036L12+ CATCGCACAATTAACCGTCGTAAAGGTTAACAATGATGACAGCGACCACGATGCCTACTT
rJMSF032D14+ CATCGCACAATTAACCGTCGTAAAGGTTAACAATGATGACAGCGACCACGATGCCTACTT
rJMFF005L01+ CATCGCACAATTAACCGTCGTAAAGGTTAACAATGATGACAGCGACCACGATGCCTACTT
rJMSF043C10+ ACAGCGACCACGATGCCTACTT
rJMSF039K20+ AAAGGTTAACAACGATGACAGCGACCTCGAGGCNTACTT
rJMSF050D14+ CATCGCACAATTAACCGTCGTAAAGGTTAACAATGATGACAGCGACCACGATGCCTACTT
____________________________________________________________
consensus CATCGCACAATTAACCGTCGTAAAGGTTAACAATGATGACAGCGACCACGATGCCTACTT
. : . : . : . : . : . :
rJMSF036L12+ GAAGGTGAGGAAGTCTAGGAGATCCCGAAACCTCAGCGAGGGGAGTAGTAGCTTCAAGGG
rJMSF032D14+ GAAGGTGAGGAAGTCTAGGAGATCCCGAAACCTCAGCGAGGGGAGTAGTAGCTTCAAGGG
rJMFF005L01+ GAAGGTGAGGAAGTCTAGGAGATCCCGAAACCTCAGCGAGGGGAGTAGTAGCTTCAAGGG
rJMSF043C10+ GAAGGTGAGGAAGTCTAGGAGATCCCGAAACCTCAGCGAGGGGAGTAGTAGCTTCAAGGG
rJMSF039K20+ GAAGGTGAGGAAGTCTAGGAGATCCCGAAACCTCAGCGAGGGGAGTAGTAGCTTCAAGGG
rJMSF050D14+ GAAGGTGAGGAAGTCTAGGAGATCCCGAAACCTCAGCGAGGGGAGTAGTAGCTTCAAGGG
____________________________________________________________
consensus GAAGGTGAGGAAGTCTAGGAGATCCCGAAACCTCAGCGAGGGGAGTAGTAGCTTCAAGGG
. : . : . : . : . : . :
rJMSF036L12+ GCTATCGGCAGTGGGATCGTTCAGCAAAGTGACCAAATCGGGCAGGATTGCTGATGAAAA
rJMSF032D14+ GCTATCGGCAGTGGGATCGTTCAGCAAAGTGACCAAATCGGGCAGGATTGCTGATGAAAA
rJMFF005L01+ GCTATCGGCAGTGGGATCGTTCAGCAAAGTGACCAAATCGGGCAGGATTGCTGATGAAAA
rJMSF043C10+ GCTATCGGCAGTGGGATCGTTCAGCAAAGTGACCAAATCGGGCAGGATTGCTGATGAAAA
rJMSF039K20+ GCTATCGGCAGTGGGATNGTTCAGCAAAGTGACCAAATCGGGCAGGATTGCTGATGAAAA
rJMSF050D14+ GCTATCGGCAGTGGGATCGTTCAGCAAAGTGACCAAATCGGGCAGGATTGCTGATGAAAA
rJMCP016A04- GCAGGAaacCTGATGAAAA
rJMCP016E11- GCAGGATTGCTGATGAAAA
____________________________________________________________
consensus GCTATCGGCAGTGGGATCGTTCAGCAAAGTGACCAAATCGGGCAGGATTGCTGATGAAAA
. : . : . : . : . : . :
rJMSF036L12+ CGACATGATTGATAAGCCATTAAGCCTTGATTGATAGCCATCGAATTTGGTATCTCAAGA
rJMSF032D14+ CGACATGATTGATAAGCCATTAAGCCTT-ATTGATAGCCATCGAATTTGGTATCTCAAGA
rJMFF005L01+ CGACATGATTGATAAGCCATTAAGCCTTGATTGATAGCCATCGAATTTGGTATCTCAAGA
rJMFF048I03+ TTTGGTATTTCAAGA
rJMSF043C10+ CGACATGATTGATAAGCCATTAAGCCTTGATTGATAGCCATCGAATTTGGTATCTCAAGA
rJMSF039K20+ CGACATGANTGATAAGCCANTAAGCCTTGATNGATAGCCATNGAANGNGGTATNTCAAGA
rJMSF050D14+ CGACATGATTGATAAGCCATTAAGCCTTGATTGATAGCCATCGAATTTGGTATCTCAAGA
rJMCP016A04- CGtgtacAaacATAAGCCATTAAGgCaacAaactaAGCCATCGtAaaaGGTATCTCAAGA
rJMCP016E11- CGACATGATTGATAAGCCATTAAGCCTTGATTGATAGCCATCGAATTTGGTATCTCAAGA
____________________________________________________________
consensus CGACATGATTGATAAGCCATTAAGCCTTGATTGATAGCCATCGAATTTGGTATCTCAAGA
. : . : . : . : . : . :
rJMSF036L12+ ATCAAGATCTCCAACTTGGCAATCAAGAATTCAATGTGGGGTCTTGCTGCACAAGTGGTA
rJMSF032D14+ ATCAAGATCTCCAACTTGGCAATCAAGAATTCAATGTGGGGTCTTGCTGCACAAGTGGTA
rJMFF005L01+ ATCAAGATCTCCAACTTGGCAATCAAGAATTCAATGTGGGGTCTTGCTGCACAAGTGGTA
rJMFF048I03+ ATCAAGATGTCCAACTTGGCAATCAAGAATTCAATGTGGGGTCTTGCTGCACAAGTGGTA
rJMSF043C10+ ATCAAGATCTCCAACTTGGCAATCAAGAATTCAATGTGGGGTCTTGCTGCACAAGTGGTA
rJMSF039K20+ ATCAAGATCTCCAACTTGGCAATCAAGAATTCAATGTGGGGTCTTGCNGCACAAGTGGTA
rJMSF050D14+ ATCAAGATCTCCAACTTGGCAATCAAGAATTCAATGTGGGGTCTTGCTGCACAAGTGGTA
rJMCP016A04- ATCAAGATCTCCAACaacGCAATCAAGAATTCAtacTGGGGTCaacCTGCACAAGTGGTA
rJMCP016E11- ATCAAGATCTCCAACTTGGCAATCAAGAATTCAATGTGGGGTCTTGCTGCACAAGTGGTA
____________________________________________________________
consensus ATCAAGATCTCCAACTTGGCAATCAAGAATTCAATGTGGGGTCTTGCTGCACAAGTGGTA
. : . : . : . : . : . :
rJMSF036L12+ TATATCTATTATAGCTCTCTCTCTCTCTCTTTTTCTCTCCATCCCCTTTGTAGATTTGGG
rJMSF032D14+ TATATCTATTATAGCTCTCTCTCTCTCTCTTTTTCTCTCCATCCCCTTTGTAGATTTGGG
rJMFF005L01+ TATATCTATTATAGCTCTCTCTCTCTCTCTTTTTCTCTCCATCCCCTTTGTAGATTTGGG
rJMFF048I03+ TATATCTATTATAGCTCTCTCTCTCTCTTTTCTTCTTTCCATCCCCTTTGTAGATTCGGG
rJMSF043C10+ TATATCTATTATAGCTCTCTCTCTCTCTCTTTTTCTCTCCATCCCCTTTGTAGATTTGGG
rJMSF039K20+ TATATCTATTATAGCTCTCT
rJMSF050D14+ TATATCTATTATAGCTCTCTCTCTCTCTCTTTTTCTCTCCATCCCCTTTGTAGATTTGGG
rJMCP016A04- TATATCTATTATAGCTCTCTCTCTCTCTCTTTTTCTCTCCATCCCCTTTGTAGATTTGGG
rJMCP016E11- TATATCTATTATAGCTCTCTCTCTCTCTCTTTTTCTCTCCATCCCCTTTGTAGATTTGGG
____________________________________________________________
consensus TATATCTATTATAGCTCTCTCTCTCTCTCTTTTTCTCTCCATCCCCTTTGTAGATTTGGG
. : . : . : . : . : . :
rJMSF036L12+ GAATAAGCAAAGCTAAAATGATTGCGAGCTCCAGGTTGGTGACTATTATTTGTGTGGGTT
rJMSF032D14+ GAATAAGCAAAGCTAAAATGATTGCGAGCTCCAGGTTGGTGACTATTATTTGTGTGGGTT
rJMFF005L01+ GAATAAGCAAAGCTAAAATGATTGCGAGCTCCAGGTTGGTGACTATTATTTGTGTGGGTT
rJMFF048I03+ GAATAAGCAAAGCTAAAATGATTGCG
rJMSF043C10+ GAATAAGCAAAGCTAAAATGATTGCGAGCTCCAGGTTGGTGACTATTATTTGTGTGGGTT
rJMSF050D14+ GAATAAGCAAAGCTAAAATGATTGCGAGCTCCAGGTTGGTGACTATTATTTGTGTGGGTT
rJMCP016A04- GAATAAGCAAAGCTAAAATGATTGCGAGCTCCAGGTTGGTGACTATTATTTGTGTGGGTT
rJMCP016E11- GAATAAGCAAAGCTAAAATGATTGCGAGCTCCAGGTTGGTGACTATTATTTGTGTGGGTT
____________________________________________________________
consensus GAATAAGCAAAGCTAAAATGATTGCGAGCTCCAGGTTGGTGACTATTATTTGTGTGGGTT
. : . : . : . : . : . :
rJMSF036L12+ GCGATATTTGTTGTAAATTTCTATTTTACTTCAGCTGAAGAAGGTTGGTGCTGTTAGCTA
rJMSF032D14+ GCGATATTTGTTGTAAATTTCTATTTTACTTCAGCTGAAGAAGGTTGGTGCTGTTAGCTA
rJMFF005L01+ GCGATATTTGTTGTAAATTTCTATTTTACTTCAGCTGAAGAAGGTTGGTGCTGTTAGCTA
rJMSF043C10+ GCGATATTTGTTGTAAATTTCTATTTTACTTCAGCTGAAGAAGGTTGGTGCTGTTAGCTA
rJMSF050D14+ GCGATATTTGTTGTAAATTTCTATTTTACTTCAGCTGAAGAAGGTTGGTGCTGTTAGCTA
rJMCP016A04- GCGATATTTGTTGTAAATTTCTATTTTACTTCAGCTGAAGAAGGTTGGTGCTGTTAGCTA
rJMCP016E11- GCGATATTTGTTGTAAATTTCTATTTTACTTCAGCTGAAGAAGGTTGGTGCTGTTAGCTA
____________________________________________________________
consensus GCGATATTTGTTGTAAATTTCTATTTTACTTCAGCTGAAGAAGGTTGGTGCTGTTAGCTA
. : . : . : . : . : . :
rJMSF036L12+ CCCAGTTAGATCAAGAATTCCATATTCTTTCCTCTCCTACCCAAAATCCTCACACCATTC
rJMSF032D14+ CCCAGTTAGATCAAGAATTCCATATTCTTTCCTCTCCTACCCAAAATCCTCACACCATTC
rJMFF005L01+ CCCAGTTAGATCAAGAATTCCATATTCTTTCCTCTCCTACCCAAAATCCTCACACCATTC
rJMSF043C10+ CCCAGTTAGATCAAGAATTCCATATTCTTTCCTCTCCTACCCAAAATCCTCACACCATTC
rJMSF050D14+ CCCAGTTAGATCAAGAATTCCATATTCTTTCCTCTCCTACCCAAAATCCTCACACCATTC
rJMCP016A04- CCCAGTTAGATCAAGAATTCCATATTCTTTCCTCTCCTACCCAAAATCCTCACACCATTC
rJMCP016E11- CCCAGTTAGATCAAGAATTCCATATTCTTTCCTCTCCTACCCAAAATCCTCACACCATTC
____________________________________________________________
consensus CCCAGTTAGATCAAGAATTCCATATTCTTTCCTCTCCTACCCAAAATCCTCACACCATTC
. : . : . : . : . : . :
rJMSF036L12+ TTCATTGCCTTCCACCTTAGCTCATCCCTTTCTGTATTAATGCTTAGGTGTGAACTGTGA
rJMSF032D14+ TTCATTGCCTTCCACCTTAGCTCATCCCTTTCTGTATTAATGCTTAGGTGTGAACTGTGA
rJMFF005L01+ TTCATTGCCTTCCACCTTAGCTCATCCCTTTCTGTATTAATGCTTAGGTGTGAACTGTGA
rJMSF043C10+ TTCATTGCCTTCCACCTTAGCTCATCCCTTTCTGTATTAATGCTTAGGTGTGAACTGTGA
rJMSF050D14+ TTCATTGCCTTCCACCTTAGCTCATCCCTTTCTGTATTAATGCTTAGGTGTGAACTGTGA
rJMCP016A04- TTCATTGCCTTCCACCTTAGCTCATCCCTTTCTGTATTAATGCTTAGGTGTGAACTGTGA
rJMCP016E11- TTCATTGCCTTCCACCTTAGCTCATCCCTTTCTGTATTAATGCTTAGGTGTGAACTGTGA
____________________________________________________________
consensus TTCATTGCCTTCCACCTTAGCTCATCCCTTTCTGTATTAATGCTTAGGTGTGAACTGTGA
. : . : . : . : . : . :
rJMSF036L12+ GGTGTATTGTTTCATTATCTTCTCTCCCCTCCCCCCATT-ACTGTAAGAAATGAATGATA
rJMSF032D14+ GGTGTATTGTTTCATTATCTTCTCTCCCCTCCCCCCATTAACTGTAAGAAATGAATGGTA
rJMFF005L01+ GGTGTATTGTTTCATTATCTTCTCTCCCCTCCCCCCATT-ACTGTAAGAAATGAATGGTA
rJMSF043C10+ GGTGTATTGTTTCATTATCTTCTCTCCCCTCCCCCCATT-ACTGTAAGAAATGAATGGTA
rJMSF050D14+ GGTGTATTGTTTCATTATCTTCTCTCCCCTCCCCCCATT-ACTGTAAGAAATGAATGGTA
rJMCP016A04- GGTGTATTGTTTCATTATCTTCTCTCCCCTCCCCCCATT-ACTGTAAGAAATGAATGGTA
rJMCP016E11- GGTGTATTGTTTCATTATCTTCTCTCCCCTCCCCCCATT-ACTGTAAGAAATGAATGGTA
____________________________________________________________
consensus GGTGTATTGTTTCATTATCTTCTCTCCCCTCCCCCCATT-ACTGTAAGAAATGAATGGTA
. : . : . : . : . : . :
rJMSF036L12+ GATGATGATGTTGTATCATCATCA
rJMSF032D14+ GATGATGATGTTGTATCATCATCA
rJMFF005L01+ GATGATGATGTTGTATCATCATCATCGTCATCGTATAATATAT
rJMSF043C10+ GATGATGATGTTGTATCATCATCATCGTCATCGTATAATATAT
rJMSF050D14+ GATGATGATGTTGTATCATCATCATCGTCATCGTATAATATAT
rJMCP016A04- GATGATGATGTTGTATCATCATCATCGTCATCGTATAATATATTAAAGAATATAAGCTGC
rJMCP016E11- GATGATGATGTTGTATCATCATCATCGTCATCGTATAATATATTAAAGAATATAAGCTGC
____________________________________________________________
consensus GATGATGATGTTGTATCATCATCATCGTCATCGTATAATATATTAAAGAATATAAGCTGC