Contig 005868:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP016C07Sequence521005868 (3)ref|XP_002515996.1|2e-21conserved hypothetical protein [Ricinus communis] gb|EEF46416.1| conserved hypot
JMFF042O23Sequence654011930 (4)emb|CDP19522.1|4e-103unnamed protein product [Coffea canephora]614005868 (3)ref|XP_006363751.1|2e-39PREDICTED: VHS domain-containing protein At3g16270-like [Solanum tuberosum]
JMSF010J17Sequence299011930 (4)gb|EPS70576.1|1e-18hypothetical protein M569_04182 [Genlisea aurea]704005868 (3)ref|XP_004237556.1|1e-54PREDICTED: VHS domain-containing protein At3g16270 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF010J17+ TTCTAATCCTAATCCTGGCCATAATGTTTCCAATGATG
                      ____________________________________________________________
consensus TTCTAATCCTAATCCTGGCCATAATGTTTCCAATGATG
 
. : . : . : . : . : . :
rJMSF010J17+ TCTTCAACAGCATGCCACCTTCTCAGATTTCTGGTTCAAGTACAATTCCAATGTTTCCTT
                      ____________________________________________________________
consensus TCTTCAACAGCATGCCACCTTCTCAGATTTCTGGTTCAAGTACAATTCCAATGTTTCCTT
 
. : . : . : . : . : . :
rJMSF010J17+ TGGGTGCAATGGCATATAATATGCCTCCTGGCTTTATGTTAAATCCATCATTTGCTTCTC
rJMFF042O23+ GCTTTATGTTAAATCCATCATTTGCTTCTC
                      ____________________________________________________________
consensus TGGGTGCAATGGCATATAATATGCCTCCTGGCTTTATGTTAAATCCATCATTTGCTTCTC
 
. : . : . : . : . : . :
rJMSF010J17+ AGGCATTGAATACAGGTGCCATGGGCAATCTTTTTGCCCAACAACAATTCCTTGCTGCAA
rJMFF042O23+ AGGCATTGAATACAGGTGCCATGGGCAATCTTTTTGCCCAACAACAATTCCTTGCTGCAA
                      ____________________________________________________________
consensus AGGCATTGAATACAGGTGCCATGGGCAATCTTTTTGCCCAACAACAATTCCTTGCTGCAA
 
. : . : . : . : . : . :
rJMSF010J17+ TGTCCACTTTCCAGCAAATGGGCAGCTTGCAGCAAACTGCTAGTGTTAATCCTGCTTCTG
rJMFF042O23+ TGTCCACTTTCCAGCAAATGGGCAGCTTGCAGCAAACTGCTAGTGTTAATCCTGCTTCTG
rJMCP016C07- GGGCAGCTTGCAGCAAACTGCTAGTGTTAATCCTGCTTCTG
                      ____________________________________________________________
consensus TGTCCACTTTCCAGCAAATGGGCAGCTTGCAGCAAACTGCTAGTGTTAATCCTGCTTCTG
 
. : . : . : . : . : . :
rJMSF010J17+ GATCTAATGGAGGTTACAATTCTGCACTTCCTGATATTTTCAATGCCAACATTCCTAACC
rJMFF042O23+ GATCTAATGGAGGTTACAATTCTGCACTTCCTGATATTTTCAATGCCAACATTCCTAACC
rJMCP016C07- GATCTAATGGAGGTTACAATTCTGCACTTCCTGATATTTTCAATGCCAACATTCCTAACC
                      ____________________________________________________________
consensus GATCTAATGGAGGTTACAATTCTGCACTTCCTGATATTTTCAATGCCAACATTCCTAACC
 
. : . : . : . : . : . :
rJMSF010J17+ AAACTCCAACATCATTGATGAACAGTCAAAAGAAAGAGGATACTAGAGCATTTGATTTTA
rJMFF042O23+ AAACTCCAACATCATTGATGAACAGTCAAAAGAAAGAGGATACTAGAGCATTTGATTTTA
rJMCP016C07- AAACTCCAACATCATTGATGAACAGTCAAAAGAAAGAGGATACTAGAGCATTTGATTTTA
                      ____________________________________________________________
consensus AAACTCCAACATCATTGATGAACAGTCAAAAGAAAGAGGATACTAGAGCATTTGATTTTA
 
. : . : . : . : . : . :
rJMSF010J17+ TCTCAGATCATCTGGCTGCGGCTCGTGACCCAAAAAGAGTAATTTAAGTTTTGAAGCTCA
rJMFF042O23+ TCTCAGATCATCTGGCTGCGGCTCGTGACCCAAAAAGAGTAATTTAAGTTTTGAAGCTCA
rJMCP016C07- TCTCActTCATCTGGCTGCGGCTCGTGACCCAAAAAGAGTAATTTAAGTTTTGAAGCTCA
                      ____________________________________________________________
consensus TCTCAGATCATCTGGCTGCGGCTCGTGACCCAAAAAGAGTAATTTAAGTTTTGAAGCTCA
 
. : . : . : . : . : . :
rJMSF010J17+ TATGCAATCACAATATGGCGCTTAGCTCCTTTGAATTTAAGGATCTCAACTTCAAAGTGG
rJMFF042O23+ TATGCAATCACAATATGGCGCTTAGCTCCTTTGAATTTAAGGATCTCAACTTCAAAGTGG
rJMCP016C07- TATGCAATCACAATATGGCGCaaAGCTCCTTTGAATTTAAGGATCTCAACTTCAAAGTGG
                      ____________________________________________________________
consensus TATGCAATCACAATATGGCGCTTAGCTCCTTTGAATTTAAGGATCTCAACTTCAAAGTGG
 
. : . : . : . : . : . :
rJMSF010J17+ AATCTGGCAATTAGACCAAGGGATCTCAACCTGAAAATATTAGTTGTTTCATAATAATAA
rJMFF042O23+ AATCTGGCAATTAGACCAAGGGATCTCAACCTGAAAATATTAGTTGTTTCATAATAATAA
rJMCP016C07- AATCTGGCAATTAGACCAAGGGATCTCAACCTGAAAATATTAGTTGTTTCATAATAATAA
                      ____________________________________________________________
consensus AATCTGGCAATTAGACCAAGGGATCTCAACCTGAAAATATTAGTTGTTTCATAATAATAA
 
. : . : . : . : . : . :
rJMSF010J17+ TAATGCTTCCTTTTGATATTTCTTAGGAGATATAGGTTGATTTGTTGAGAACTTTTGTTT
rJMFF042O23+ TAATGCTTCCTTTTGATATTTCTTAGGAGATATAGGTTGATTTGTTGAGAACTTTTGTTT
rJMCP016C07- TAATGCTTCCTTTTGATATTTCTTAGGAGATATAGGTTGATTTGTTGAGAACTTTTGTTT
                      ____________________________________________________________
consensus TAATGCTTCCTTTTGATATTTCTTAGGAGATATAGGTTGATTTGTTGAGAACTTTTGTTT
 
. : . : . : . : . : . :
rJMSF010J17+ TGGCGCGTCACATAAGTGTAATGAATCCCTAGTACAAGAAAAAGAAAGATTTGGTCGGTG
rJMFF042O23+ TGGCGCGTCACATAAGTGTAATGAATCCCTAGTACAAGAAAAAGAAAGATTTGGTCGGTG
rJMCP016C07- TGGCGCGTCACATAAGTGTAATGAATCCCTAGTACAAGAAAAAGAAAGATTTGGTCGGTG
                      ____________________________________________________________
consensus TGGCGCGTCACATAAGTGTAATGAATCCCTAGTACAAGAAAAAGAAAGATTTGGTCGGTG
 
. : . : . : . : . : . :
rJMSF010J17+ ATGCTT
rJMFF042O23+ ATGCTTGTTGATTTGATGTAATGACAGAAGAATGAAGTATGTGC
rJMCP016C07- ATGCTTGTTGATTTGATGTAATGACAGAAGAATGAAGTATGTGCAGATTTATATTCTTTT
                      ____________________________________________________________
consensus ATGCTTGTTGATTTGATGTAATGACAGAAGAATGAAGTATGTGCAGATTTATATTCTTTT