Contig 005865:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP005G01Sequence491005865 (2)
JMSF028I17Sequence674005445 (8)ref|XP_004236792.1|1e-82PREDICTED: inositol phosphorylceramide glucuronosyltransferase 1-like isoform X732005865 (2)gb|EYU35431.1|5e-26hypothetical protein MIMGU_mgv1a002847mg [Erythranthe guttata] gb|EYU35432.1| hy

Alignment

This contig is upended


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rJMSF028I17+                   CCGGCCAAATTCCATATTCTAACTTAGNAGGGATGCAAGCACTGTTCCGAA
                      ____________________________________________________________
consensus                      CCGGCCAAATTCCATATTCTAACTTAGNAGGGATGCAAGCACTGTTCCGAA
 
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rJMSF028I17+          TTGGTAGAGGTGAACTCCCTCCTATACCTAATTCTTTGTCAAAAGATGCTCAGGATTTTA
                      ____________________________________________________________
consensus             TTGGTAGAGGTGAACTCCCTCCTATACCTAATTCTTTGTCAAAAGATGCTCAGGATTTTA
 
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rJMSF028I17+          TCTGTAAATGCTTACAAGTTAATCCAACTGATCGGCCTACTGCTGCTGAACTATTGGAAC
                      ____________________________________________________________
consensus             TCTGTAAATGCTTACAAGTTAATCCAACTGATCGGCCTACTGCTGCTGAACTATTGGAAC
 
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rJMSF028I17+          ATCCATTTCTGAGGACAGCAAGTCCTGTGCCTCCCAGGTCGTGAAATAATTTTGGAACTT
                      ____________________________________________________________
consensus             ATCCATTTCTGAGGACAGCAAGTCCTGTGCCTCCCAGGTCGTGAAATAATTTTGGAACTT
 
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rJMSF028I17+          AATTGGTCTGTGACGGCTGAGATTATTCAATGGAGCCATTCCAGCCGGGAATTGTCACTT
rJMCP005G01-                                                           AATTGTCACTT
                      ____________________________________________________________
consensus             AATTGGTCTGTGACGGCTGAGATTATTCAATGGAGCCATTCCAGCCGGGAATTGTCACTT
 
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rJMSF028I17+          TCTACACTATAATGTAGATGATTTTACAAGAGTAAATGGGTATTCATATTGTATATATGA
rJMCP005G01-          TCTACACTATAATGTAGATGATTTTACAAGAGTAAATGGGTATTCATATTGTATATATGA
                      ____________________________________________________________
consensus             TCTACACTATAATGTAGATGATTTTACAAGAGTAAATGGGTATTCATATTGTATATATGA
 
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rJMSF028I17+          TCTCTGTAGTCTGTACTATGATCTGCCGTTCCTTCCTCACTTATCATTGCCGCATGAATC
rJMCP005G01-          TCTCTGTAGTCTGTACTATGATCTGCCGTTCCTTCCTCACTTATCATTGCCGCATGAATC
                      ____________________________________________________________
consensus             TCTCTGTAGTCTGTACTATGATCTGCCGTTCCTTCCTCACTTATCATTGCCGCATGAATC
 
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rJMSF028I17+          TCGGGATTTACTGGATCAAGAAGACTAGAGCCTTTATTGAAGGCACAAGTGCATTTGGTG
rJMCP005G01-          TCGGGATTTACTGGATCAAGAAGACTAGAGCCTTTATTGAAGGCACAAGTGCATTTGGTG
                      ____________________________________________________________
consensus             TCGGGATTTACTGGATCAAGAAGACTAGAGCCTTTATTGAAGGCACAAGTGCATTTGGTG
 
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rJMSF028I17+          TTTTGAGAGCTCGAACCTGAAATATAATTTCGTAAACCTGGAAACGAAGTCCCTGGAAGT
rJMCP005G01-          TTTTGAGAGCTCGAACCTGAAATATAATTTCGTAAACCTGGAAACGAAGTCCCTGGAAGT
                      ____________________________________________________________
consensus             TTTTGAGAGCTCGAACCTGAAATATAATTTCGTAAACCTGGAAACGAAGTCCCTGGAAGT
 
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rJMSF028I17+          ACAACCAGCACCACCGAGGGTATTGCTTTTCTCACCAAGTGTCTGAGCACCGTAATTGTA
rJMCP005G01-          ACAACCAGCACCACCGAGGGTATTGCTTTTCTCACCAAGTGTCTGAGCACCGTAATTGTA
                      ____________________________________________________________
consensus             ACAACCAGCACCACCGAGGGTATTGCTTTTCTCACCAAGTGTCTGAGCACCGTAATTGTA
 
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rJMSF028I17+          CTAGAAGTCTAGAACTGGATTATTGCTTTCCTTGATTCTTGATTCTTTAGTCTCATTTTT
rJMCP005G01-          CTAGAAGTCTAGAACTGGATTATTGCTTTCCTTGATTCTTGATTCTTTAGTCTCATTTTT
                      ____________________________________________________________
consensus             CTAGAAGTCTAGAACTGGATTATTGCTTTCCTTGATTCTTGATTCTTTAGTCTCATTTTT
 
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rJMSF028I17+          TTGACCTATGCGTCTGCAGTGTGTAGTGTGTAGTGTAGAGGATTGTGGTTGTGAAGCAAA
rJMCP005G01-          TTGACCTATGCGTCTGCAGTGTGTAGTGTGTAGTGTAGAGGATTGTGGTTGTGAAGCAAA
                      ____________________________________________________________
consensus             TTGACCTATGCGTCTGCAGTGTGTAGTGTGTAGTGTAGAGGATTGTGGTTGTGAAGCAAA
 
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rJMSF028I17+          TTGTAAATACCGACTTCTT                                         
rJMCP005G01-          TTGTAAATACCGACTTCTTTCTCTTGTGCGTTTTCAAAGGAAATTGTTAGAATTGCTTCG
                      ____________________________________________________________
consensus             TTGTAAATACCGACTTCTTTCTCTTGTGCGTTTTCAAAGGAAATTGTTAGAATTGCTTCG