asagaodb

Contig 005860: Sequence
BLAST Hits against nr-aa DB Show

clone	5'-sequence						3'-sequence
clone	Seq.	length	contig	BestHit	Evalue	description	length	contig	BestHit	Evalue	description
JMCP007E05	Sequence						347	005860 (12)
JMCP009A08	Sequence	366	005860 (12)
JMCP009G08	Sequence	293	005860 (12)
JMCP009G12	Sequence	284	005860 (12)
JMCP010A05	Sequence	363	005860 (12)
JMCP016B07	Sequence						273	005860 (12)
JMCP017B05	Sequence	504	005860 (12)
JMCP018B10	Sequence	293	005860 (12)
JMCP019D06	Sequence						265	005860 (12)
JMCP019D10	Sequence						255	005860 (12)
JMCP020C01	Sequence	340	005860 (12)
JMFF043K03	Sequence	638	010250 (7)	ref\|XP_009615249.1\|	2e-29	PREDICTED: glycine-rich protein 2-like [Nicotiana tomentosiformis]	218	005860 (12)
Alignment

This contig is upended


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JMCP017B05+                                    TTTACCAGAAAATGGAAAGATCTCAAAGGACTCAA
                      ____________________________________________________________
consensus                                      TTTACCAGAAAATGGAAAGATCTCAAAGGACTCAA
 
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JMCP017B05+           CCCCCAATGTGTCCCCACTATTTGAAAAGAAAATTCCTTCTTCAATGTCCTTTTCAATTT
                      ____________________________________________________________
consensus             CCCCCAATGTGTCCCCACTATTTGAAAAGAAAATTCCTTCTTCAATGTCCTTTTCAATTT
 
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JMCP017B05+           TCTTTCAAAATACAAAACCAAATGTAATTACTAACTTCATCACTGTGAAATGGAGAGAGT
JMCP009A08+                                                        TGAAATGGAGAGAGT
                      ____________________________________________________________
consensus             TCTTTCAAAATACAAAACCAAATGTAATTACTAACTTCATCACTGTGAAATGGAGAGAGT
 
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JMCP017B05+           AGATTTCAAGATTCATGGATTATAACTAAACCAACCAAGCATATTACACTCCAAATCCCA
JMCP020C01+                    GATTCATGGATTATAACTtttggttggtAGCATATTACACTCCAAATCCCA
rJMCP007E05+             TTTCAAGATTCATGGATTATAACTAAACCAACCAAGCATATTACACTCCAAATCCCA
JMCP009G08+                                                                    CCA
JMCP018B10+                                                                   CCCA
rJMFF043K03-           AATTTCAAGATTCAGGGATTATAACTAAACCAACCAAGCATATTACACTCCAAATCCCA
JMCP009A08+           AGATTTCAAGATTCATGGATTATAACTAAACCAACCAAGCATATTACACTCCAAATCCCA
JMCP010A05+             ATTTCAAGATTCATGGATTATAtCTAAACCAACCAAGCATATTACACTCCAAATCCCA
                      ____________________________________________________________
consensus             AGATTTCAAGATTCATGGATTATAACTAAACCAACCAAGCATATTACACTCCAAATCCCA
 
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JMCP017B05+           AAACACATTAATTTTTCATTACTTCTACTACTGAGCATCATAAGCAGCAAAAAAGACTTA
JMCP020C01+           AAACACATTAATTTTTCATTACTTCTACTACTGAGCATCATAAGCAGCAAAAAAGACTTA
rJMCP007E05+          AAACACATTAATTTTTCATTACTTCTACTACTGAGCATCATAAGCAGCAAAAAAGACTTA
JMCP009G08+           AAACACATTAATTTTTCATTACTTCTACTACTGAGCATCATAAGCAGCAAAAAAGACTTA
JMCP018B10+           AAACACATTAATTTTTCATTACTTCTACTACTGAGCATCATAAGCAGCAAAAAAGACTTA
rJMCP019D06+                                  CTACTAgaGAGCATCATAAGCAGCAAAAAAGACTTA
rJMFF043K03-          AAACACATTAATTTTTCATTACTTCTACTACTGAGCATCATAAGCAGCAAAAAAGACTTA
JMCP009A08+           AAACACATTAATTTTTCATTACTTCTACTACTGAGCATCATAAGCAGCAAAAAAGACTTA
JMCP009G12+                           CATTACTTCTACTACTGAGCATCATAAGCAGCAAAAAAGACTTA
rJMCP016B07+                          CATTACTTCTACTACTGAGCATCATAAGCAGCAAAAAAGACTTA
rJMCP019D10+                                            GCATCATAAGCAGCAAAAAAGACTTA
JMCP010A05+           AAACACATTAATTTTTCATTAgTagTACTACTGAGCATCATAAGCAGgttAAAAGACTTA
                      ____________________________________________________________
consensus             AAACACATTAATTTTTCATTACTTCTACTACTGAGCATCATAAGCAGCAAAAAAGACTTA
 
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JMCP017B05+           AAAAGAAGATAGGTGGCTAGCTAGTTTTTTTTTCATCACCAGTTCACAAAAACAGTTGAA
JMCP020C01+           AAAAGAAGATAGGTGGCTAGCTAGTTTTTTTTTCATCACCAGTTCACAAAAACAGTTGAA
rJMCP007E05+          AAAAGAAGATAGGTGGCTAGCTAG-TTTTTTTTCATCACCAGTTCACAAAAACAGTTGAA
JMCP009G08+           AAAAGAAGATAGGTGGCTAGCTAGTTTTTTTTTCATCACCAGTTCACAAAAACAGTTGAA
JMCP018B10+           AAAAGAAGATAGGTGGCTAGCTAGTTTTTTTTTCATCACCAGTTCACAAAAACAGTTGAA
rJMCP019D06+          AAGAGAAGGTAGGTGGCTAGCTAGTTTTTTTTTCATCACCAGTTCACAAAAACAGTTGAA
rJMFF043K03-          AAAAGAAAATAGGGGGCTAGCTAGTTTTTTTTTCATCACCAGTTCACAAAAACAGTTGAA
JMCP009A08+           AAAAGAAGATAGGTGGCTAGCTAGTTTTTTTTTCATCACCAGTTCACAAAAACAGTTGAA
JMCP009G12+           AAAAGAAGATAGGTGGCTAGCTAGTTTTTTTTTCATCACCAGTTCACAAAAACAGTTGAA
rJMCP016B07+          AAAAGAAGATAGGTGGCTAGCTAGTTTTTTTTTCATCACCAGTTCACAAAAACAGTTGAA
rJMCP019D10+          AAGAGAAGGTAGGTGGCTAGCTAGTTTTTTTTTCATCACCAGTTCACAAAAACAGTTGAA
JMCP010A05+           AAAAGAAGATAGGTGGCTAGCaAGTTTTTTTTTCATCACgtcTTCAgttAAAgtcTTGAA
                      ____________________________________________________________
consensus             AAAAGAAGATAGGTGGCTAGCTAGTTTTTTTTTCATCACCAGTTCACAAAAACAGTTGAA
 
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JMCP017B05+           ACAAAATGAAAGGGCATAGAACAGAGGAATGGAATGTGATGATCCACATTTTCCCTCCCT
JMCP020C01+           ACAAAATGAAAGGGCATAGAACAGAGGAATGGAATGTGATGATCCACATTTTCCCTCCCT
rJMCP007E05+          ACAAAATGAAAGGGCATAGAACAGAGGAATGGAATGTGATGATCCACATTTTCCCTCCCT
JMCP009G08+           ACAAAATGAAAGGGCATAGAACAGAGGAATGGAATGTGATGATCCACATTTTCCCTCCCT
JMCP018B10+           ACAAAATGAAAGGGCATAGAACAGAGGAATGGGATGTGATGATCCACATTTTCCCTCCCT
rJMCP019D06+          ACAAAATAAAAGGGCATAGAACAGAGGAATGGAATGTGATGATCCACATTTTCCCTCCCT
rJMFF043K03-          ACAAAATGAAAGGGCATAAAACAGAGGAA                               
JMCP009A08+           ACAAAATGAAAGGGCATAGAACAGAGGAATGGAATGTGATGATCCACATTTTCCCTCCCT
JMCP009G12+           ACAAAATGAAAGGGCATAGAACAGAGGAATGGAATGTGATGATCCACATTTTCCCTCCCT
rJMCP016B07+          ACAAAATGAAAGGGCATAGAACAGAGGAATGGAATGTGATGATCCACATTTTCCCTCCCT
rJMCP019D10+          ACAAAATAAAAGGGCATAGAACAGAGGAATGGAATGTGATGATCCACATTTTCCCTCCCT
JMCP010A05+           AgttttTGtttGGGgtaAGAACAGAGGAATGGAATGTGATGATCCACATTTTCCCTCCga
                      ____________________________________________________________
consensus             ACAAAATGAAAGGGCATAGAACAGAGGAATGGAATGTGATGATCCACATTTTCCCTCCCT
 
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JMCP017B05+           CTGGGTTGGTTGTTGGGTAAACAGTCTAGCGATTGCTGTTTGGGCAGTCACGAGCAAAGT
JMCP020C01+           CTGGGTTGGTTGTTGGGTAAACAGTCTAGCGATTGCTGTTTGGGCAGTCACGAGCAAAGT
rJMCP007E05+          CTGGGTTGGTTGTTGGGTAAACAGTCTAGCGATTGCTGTTTGGGCAGTCACGAGCAAAGT
JMCP009G08+           CTGGGTTGGTTGTTGGGTAAACAGTCTAGCGATTGCTGTTTGGGCAGTCACGAGCAAAGT
JMCP018B10+           CTGGGTTGGTTGTTGGGTAAACAGTCTAGCGATTGCTGTTTGGGCAGTCACGAGCAAAGT
rJMCP019D06+          CTGGGTTGGTTGTTGGGTAAACAGTCTAGCGATTGCTGTTTGGGCAGTCACGAGCAAAGT
JMCP009A08+           CTGGGTTGGTTGTTGGGTAAACAGTCTAGCGATTGCTGTTTGGGCAGTCACGAGCAAAGT
JMCP009G12+           CTGGGTTGGTTGTTGGGTAAACAGTCTAGCGATTGCTGTTTGGGCAGTCACGAGCAAAGT
rJMCP016B07+          CTGGGTTGGTTGTTGGGTAAACAGTCTAGCGATTGCTGTTTGGGCAGTCACGAGCAAAGT
rJMCP019D10+          CTGGGTTGGTTGTTGGGTAAACAGTCTAGCGATTGCTGTTTGGGCAGTCACGAGCAAAGT
JMCP010A05+           gTGGGTTGGTTGTTGGGTAAAgtcTCTAGCGATTGCTGTTTGGGgtcagACGAGgttAGT
                      ____________________________________________________________
consensus             CTGGGTTGGTTGTTGGGTAAACAGTCTAGCGATTGCTGTTTGGGCAGTCACGAGCAAAGT
 
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JMCP017B05+           GCCCATCCTCCCCACAGCTGAAGCAACCACCGCCGCCTCCGCCTCCGCC           
JMCP020C01+           GCCCATCCTCCCCACAGCTGAAGCAACCACCGCCGCCTCCGCCTCCGCC           
rJMCP007E05+          GCCCATCCTCCCCACAGCTGAAGCAACCACCGCCGCCTCCGCCTCCGCC           
JMCP009G08+           GCCCATCCTCCCCACAGCTGAAGCAACCACCGCCGCCTCCGCCTCCGCC           
JMCP018B10+           GCCCATCCTCCCCACAGCTGAAGCAACCACCGCCGCCTCCGCCTCCGCC           
rJMCP019D06+          GCCCATCCTCCCCACAGCTGAAGCAACTACCGCCGCCTCCGCCTCCGCC           
JMCP009A08+           GCCCATCCTCCCCACAGCTGAAGCAACCACCGCCGCCTCCGCCTCCGCC           
JMCP009G12+           GCCCATCCTCCCCACAGCTGAAGCAACCACCGCCGCCTCCGCCTCCGCCGCCGTAACGGC
rJMCP016B07+          GCCCATCCTCCCCACAGCTGAAGCAACCACCGCCGCCTCCGCCTCCGCC           
rJMCP019D10+          GCCCATCCTCCCCACAGCTGAAGCAACTACCGCCGCCTCCGCCTCCGCC           
JMCP010A05+           GCCgtaCCTCCCCAgtcgaGAAGgttCCACCGCCGCCaggGggaggGCCGCCGTAACGGC
                      ____________________________________________________________
consensus             GCCCATCCTCCCCACAGCTGAAGCAACCACCGCCGCCTCCGCCTCCGCCGCCGTAACGGC
Contig 005860: SequenceBLAST Hits against nr-aa DB Show

Alignment

Contig 005860: Sequence
BLAST Hits against nr-aa DB Show
