Contig 005856:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF032K23Sequence725012109 (4)ref|XP_006342209.1|3e-70PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl683005856 (3)gb|AIU50327.1|4e-101ABC1-like kinase, partial [Solanum lycopersicum]
JMSF038G11Sequence655012109 (4)ref|XP_006342209.1|1e-48PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl862005856 (3)gb|AIU50327.1|1e-98ABC1-like kinase, partial [Solanum lycopersicum]
JMSF052N09Sequence723012109 (4)ref|XP_006342209.1|4e-70PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl915005856 (3)gb|AIU50327.1|2e-119ABC1-like kinase, partial [Solanum lycopersicum]

Alignment

This contig is upended


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rJMSF052N09+                                                     ATGCATTAGACTTTTTG
                      ____________________________________________________________
consensus                                                        ATGCATTAGACTTTTTG
 
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rJMSF052N09+          TCCCCTGATGTAGATGTTTCTCCAATTGTACCAGCACTCCGAAATTTCTTTGACGATGCA
                      ____________________________________________________________
consensus             TCCCCTGATGTAGATGTTTCTCCAATTGTACCAGCACTCCGAAATTTCTTTGACGATGCA
 
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rJMSF052N09+          CTTAACTCAACTGTGAGTGAACTTAACTTTAAGACAATTGTTGATGGCTTGGGTGCTGTG
                      ____________________________________________________________
consensus             CTTAACTCAACTGTGAGTGAACTTAACTTTAAGACAATTGTTGATGGCTTGGGTGCTGTG
 
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rJMSF032K23+                                                       CTAAGGTCCCTCACT
rJMSF038G11+                               GTTCCAGCTTATTATGCATTGATTCTAAGGTCCCTCACT
rJMSF052N09+          TTGTATCAATACCCCTTTAATGTTCCAGCTTATTATGCATTGATTCTAAGGTCCCTCACT
                      ____________________________________________________________
consensus             TTGTATCAATACCCCTTTAATGTTCCAGCTTATTATGCATTGATTCTAAGGTCCCTCACT
 
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rJMSF032K23+          GTTTTGGAAGGCTTAGCTCTATATGCTGATCCTAAGTTCAAAGTGCTAGCGGCATCATAT
rJMSF038G11+          GTTTTGGAAGGCTTAGCTCTATATGCTGATCCTAAGTTCAAAGTGCTAGCGGCATCATAT
rJMSF052N09+          GTTTTGGAAGGCTTAGCTCTATATGCTGATCCTAAGTTCAAAGTGCTAGCGGCATCATAT
                      ____________________________________________________________
consensus             GTTTTGGAAGGCTTAGCTCTATATGCTGATCCTAAGTTCAAAGTGCTAGCGGCATCATAT
 
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rJMSF032K23+          CCATATTTTGCTAAGAGGCTTCTTACAGATCCGAACCCATATCTTAGAGATGCTCTCATT
rJMSF038G11+          CCATATTTTGCTAAGAGGCTTCTTACAGATCCGAACCCATATCTTAGAGATGCTCTCATT
rJMSF052N09+          CCATATTTTGCTAAGAGGCTTCTTACAGATCCGAACCCATATCTTAGAGATGCTCTCATT
                      ____________________________________________________________
consensus             CCATATTTTGCTAAGAGGCTTCTTACAGATCCGAACCCATATCTTAGAGATGCTCTCATT
 
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rJMSF032K23+          GAGTTGCTTTTTAAGGATGGAAAGTTCAGGTGGAATAGACTTGAAAATCTGCTTGTCCAG
rJMSF038G11+          GAGTTGCTTTTTAAGGATGGAAAGTTCAGGTGGAATAGACTTGAAAATCTGCTTGTCCAG
rJMSF052N09+          GAGTTGCTTTTTAAGGATGGAAAGTTCAGGTGGAATAGACTTGAAAATCTGCTTGTCCAG
                      ____________________________________________________________
consensus             GAGTTGCTTTTTAAGGATGGAAAGTTCAGGTGGAATAGACTTGAAAATCTGCTTGTCCAG
 
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rJMSF032K23+          GGAAAGAAAGATCGAGATTTTTCTGCAAGAGATGCCTTACAACCTGTCCTAAAGTTATTA
rJMSF038G11+          GGAAAGAAAGATCGAGATTTTTCTGCAAGAGATGCCTTACAACCTGTCCTAAAGTTATTA
rJMSF052N09+          GGAAAGAAAGATCGAGATTTTTCTGCAAGAGATGCCTTACAACCTGTCCTAAAGTTATTA
                      ____________________________________________________________
consensus             GGAAAGAAAGATCGAGATTTTTCTGCAAGAGATGCCTTACAACCTGTCCTAAAGTTATTA
 
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rJMSF032K23+          TTGGGTCCAGACGGTGAGGAATTGAGGGTTTTGGTGACTAAAGAGGCTATTCGTGTCACT
rJMSF038G11+          TTGGGTCCAGACGGTGAGGAATTGAGGGTTTTGGTGACTAAAGAGGCTATTCGTGTCACT
rJMSF052N09+          TTGGGTCCAGACGGTGAGGAATTGAGGGTTTTGGTGACTAAAGAGGCTATTCGTGTCACT
                      ____________________________________________________________
consensus             TTGGGTCCAGACGGTGAGGAATTGAGGGTTTTGGTGACTAAAGAGGCTATTCGTGTCACT
 
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rJMSF032K23+          GAAGCTGTCATTCTGGGCTCAATTATTGAATCATATAACTTCATCCCTGGTCCGATGAGG
rJMSF038G11+          GAAGCTGTCATTCTGGGCTCAATTATTGAATCATATAACTTCATCCCTGGTCCGATGAGG
rJMSF052N09+          GAAGCTGTCATTCTGGGCTCAATTATTGAATCATATAACTTCATCCCTGGTCCGATGAGG
                      ____________________________________________________________
consensus             GAAGCTGTCATTCTGGGCTCAATTATTGAATCATATAACTTCATCCCTGGTCCGATGAGG
 
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rJMSF032K23+          ACTATTATCTTCAATGGCAATGCAGCCGGTCCTCTTGTGATGAATCCTGCTGAACAGGAA
rJMSF038G11+          ACTATTATCTTCAATGGCAATGCAGCCGGTCCTCTTGTGATGAATCCTGCTGAACAGGAA
rJMSF052N09+          ACTATTATCTTCAATGGCAATGCAGCCGGTCCTCTTGTGATGAATCCTGC--AACAGGAA
                      ____________________________________________________________
consensus             ACTATTATCTTCAATGGCAATGCAGCCGGTCCTCTTGTGATGAATCCTGCTGAACAGGAA
 
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rJMSF032K23+          AGCATGATGGATCTCAGGGCACAAGTATTTAGGATATGGGGTCTTTTGCGATCCTCTGAG
rJMSF038G11+          AGCATGATGGATCTCAGGGCACAAGTATTTAGGATATGGGGTCTTTTGCGATCCTCTGAG
rJMSF052N09+          AGCATGATGGATCTCAGGGCACAAGTATTTAGGATATGGGGTCTTTTGCGATCCTCTGAG
                      ____________________________________________________________
consensus             AGCATGATGGATCTCAGGGCACAAGTATTTAGGATATGGGGTCTTTTGCGATCCTCTGAG
 
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rJMSF032K23+          AGTTTTGACCCAAGCCTTCTACAACCTATTTTACAG                        
rJMSF038G11+          AGTTTTGACCCAAGCCTTCTACAACCTATTTTACAG                        
rJMSF052N09+          AGTTTTGACCCAAGCCTTCTACAACCTATTTTACAGATACTCCAAGAACCTGAGGCACGC
                      ____________________________________________________________
consensus             AGTTTTGACCCAAGCCTTCTACAACCTATTTTACAGATACTCCAAGAACCTGAGGCACGC
 
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rJMSF052N09+          AGCATTGGAGGACGCGTTGTTGGTGGAATAAGCCAACGCCTTGCAGCGCGGTTACTGCAA
                      ____________________________________________________________
consensus             AGCATTGGAGGACGCGTTGTTGGTGGAATAAGCCAACGCCTTGCAGCGCGGTTACTGCAA
 
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rJMSF052N09+          CAAGTTCTTCGAGCTCCTTCTCCAACTGTTAAGTAATTGTATCTCAAAATTCCTGTTGTA
                      ____________________________________________________________
consensus             CAAGTTCTTCGAGCTCCTTCTCCAACTGTTAAGTAATTGTATCTCAAAATTCCTGTTGTA
 
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rJMSF052N09+          GATTCAAAGGAAAACTGAAATTCTGTCACCATGACCTGTGACAATTATGTTCGAATGCTT
                      ____________________________________________________________
consensus             GATTCAAAGGAAAACTGAAATTCTGTCACCATGACCTGTGACAATTATGTTCGAATGCTT