Contig 005854:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF026M03Sequence672010411 (6)ref|XP_009371612.1|1e-28PREDICTED: U-box domain-containing protein 5-like [Pyrus x bretschneideri] ref|X697005854 (2)ref|XP_009603280.1|4e-25PREDICTED: U-box domain-containing protein 5 [Nicotiana tomentosiformis] ref|XP_
JMSF052I09Sequence473024303942005854 (2)ref|XP_009603280.1|2e-54PREDICTED: U-box domain-containing protein 5 [Nicotiana tomentosiformis] ref|XP_

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF052I09+ GGGATTTGTTGGAGCCGTCCATCAGAATACTCTTCAACTTGT
                      ____________________________________________________________
consensus GGGATTTGTTGGAGCCGTCCATCAGAATACTCTTCAACTTGT
 
. : . : . : . : . : . :
rJMSF052I09+ CTGGAAACGACAACATCCGGCTTTTATTCGTGCCCTCCGAGCTGATCCCGAGATTGATTC
                      ____________________________________________________________
consensus CTGGAAACGACAACATCCGGCTTTTATTCGTGCCCTCCGAGCTGATCCCGAGATTGATTC
 
. : . : . : . : . : . :
rJMSF052I09+ CGTTCTTCAACGATGCCTGTCTCGCGAGATATTCCTTAGCCATCTTGAAAAACCTGTGCA
                      ____________________________________________________________
consensus CGTTCTTCAACGATGCCTGTCTCGCGAGATATTCCTTAGCCATCTTGAAAAACCTGTGCA
 
. : . : . : . : . : . :
rJMSF052I09+ ACAACCAAGATGCTAGAATCTCTGTCGCTGAGACCGACGGGTGCATTGCTTCTGTGGCGA
                      ____________________________________________________________
consensus ACAACCAAGATGCTAGAATCTCTGTCGCTGAGACCGACGGGTGCATTGCTTCTGTGGCGA
 
. : . : . : . : . : . :
rJMSF026M03+ CTGGATAGCGAAAATCTCGAGAACCAAGAGCATGCAGTGGCCGTTCTTCTTTCAT
rJMSF052I09+ AGCTACTGGATAGCGAAAATCTCGAGAACCAAGAGCATGCAGTGGCCGTTCTTCTTTCAT
                      ____________________________________________________________
consensus AGCTACTGGATAGCGAAAATCTCGAGAACCAAGAGCATGCAGTGGCCGTTCTTCTTTCAT
 
. : . : . : . : . : . :
rJMSF026M03+ TGTGCTCTCAAAGATCTCAATATTGCGACCTCGTTATGGCTGAGGGGGTTATCCCCGACC
rJMSF052I09+ TGTGCTCTCAAAGATCTCAATATTGCGACCTCGTTATGGCTGAGGGGGTTATCCCCGACC
                      ____________________________________________________________
consensus TGTGCTCTCAAAGATCTCAATATTGCGACCTCGTTATGGCTGAGGGGGTTATCCCCGACC
 
. : . : . : . : . : . :
rJMSF026M03+ TCGTTAGTATATCCCTCAACGGGAATAGCAAAGGAAAGGCAATGGCTTCAGAAATGCTGC
rJMSF052I09+ TCGTTAGTATATCCCTCAACGGGAATAGCAAAGGAAAGGCAATGGCTTCAGAAATGCTGC
                      ____________________________________________________________
consensus TCGTTAGTATATCCCTCAACGGGAATAGCAAAGGAAAGGCAATGGCTTCAGAAATGCTGC
 
. : . : . : . : . : . :
rJMSF026M03+ GGATCTTGAGAGACGAATGCCACAGCATCGGAGAACCTTCCCAACCCGACACCAATGCCA
rJMSF052I09+ GGATCTTGAGAGACGAATGCCACAGCATCGGAGAACCTTCCCAACCCGACACCAATGCCA
                      ____________________________________________________________
consensus GGATCTTGAGAGACGAATGCCACAGCATCGGAGAACCTTCCCAACCCGACACCAATGCCA
 
. : . : . : . : . : . :
rJMSF026M03+ CTAGATACACCGCCACTGCCAATGGCGGCAACGACTCTACGGAGAGAAGACCATCAACCA
rJMSF052I09+ CTAGATACACCGCCACTGCCAATGGCGGCAACGACTCTACGGAGAGAAGACCATCAACCA
                      ____________________________________________________________
consensus CTAGATACACCGCCACTGCCAATGGCGGCAACGACTCTACGGAGAGAAGACCATCAACCA
 
. : . : . : . : . : . :
rJMSF026M03+ AGCCAACAGGAATTCTCGGGAAATTGTTCGCTGCAAAAAGGAGAAGGTAGGAACCGGATA
rJMSF052I09+ AGCCAACAGGAATTCTCGGGAAATTGTTCGCTGCAAAAAGGAGAAGGTAGGAACCGGATA
                      ____________________________________________________________
consensus AGCCAACAGGAATTCTCGGGAAATTGTTCGCTGCAAAAAGGAGAAGGTAGGAACCGGATA
 
. : . : . : . : . : . :
rJMSF026M03+ TCCTCTCTTCTTATTCTAGGACAAGATACTAACTATCCTCGGGATTAACACCTAGGAGCA
rJMSF052I09+ TCCTCTCTTCTTATTCTAGGACAAGATACTAACTATCCTCGGGATTAACACCTAGGAGCA
                      ____________________________________________________________
consensus TCCTCTCTTCTTATTCTAGGACAAGATACTAACTATCCTCGGGATTAACACCTAGGAGCA
 
. : . : . : . : . : . :
rJMSF026M03+ AGACCACTCAACGCGCGCTAAGGTATTGATTAAAGCCGAATATGTACAGTTCTGCATAAT
rJMSF052I09+ AGACCACTCAACGCGCGCTAAGGTATTGATTAAAGCCGAATATGTACAGTTCTGCATAAT
                      ____________________________________________________________
consensus AGACCACTCAACGCGCGCTAAGGTATTGATTAAAGCCGAATATGTACAGTTCTGCATAAT
 
. : . : . : . : . : . :
rJMSF026M03+ ATGAAGTGGGATTTGCTTATTATGTTATTGTGGTTAGATGAGAAGATATTGCTATTAGTG
rJMSF052I09+ ATGAAGTGGGATTTGCTTATTATGTTATTGTGGTTAGATGAGAAGATATTGCTATTAGTG
                      ____________________________________________________________
consensus ATGAAGTGGGATTTGCTTATTATGTTATTGTGGTTAGATGAGAAGATATTGCTATTAGTG
 
. : . : . : . : . : . :
rJMSF026M03+ AAGTAAAATTTGTGTATATGAATTAGGAGTGTAGATGGGTATAGGTTTGGAAGTATTAGG
rJMSF052I09+ AAGTAAAATTTGTGTATATGAATTAGGAGTGTAGATGGGTATAGGTTTGGAAGTATTAGG
                      ____________________________________________________________
consensus AAGTAAAATTTGTGTATATGAATTAGGAGTGTAGATGGGTATAGGTTTGGAAGTATTAGG
 
. : . : . : . : . : . :
rJMSF026M03+ TGGAAAAATCCCATTTAGTATAGTGATCTGCAAATGGATGAGAGTTGCAGATTCTTGAGA
rJMSF052I09+ TGGAAAAATCCCATTTAGTATAGTGATCTGCAAATGGATGAGAGTTGCAGATTCTTGAGA
                      ____________________________________________________________
consensus TGGAAAAATCCCATTTAGTATAGTGATCTGCAAATGGATGAGAGTTGCAGATTCTTGAGA
 
. : . : . : . : . : . :
rJMSF026M03+ TGGGTGCTTCATTATATGCTGTAGATCAATGAAGTCTGTTTT
rJMSF052I09+ TGGGTGCTTCATTATATGCTGTAGATCAATGAAGTCTGTTTTGTATATGATGACAATCTA
                      ____________________________________________________________
consensus TGGGTGCTTCATTATATGCTGTAGATCAATGAAGTCTGTTTTGTATATGATGACAATCTA