Contig 005853:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF052H15-                                GGCGATTTACCCTCTTTTGCAGCAGATTTACCCTCGTCT
                      ____________________________________________________________
consensus                                  GGCGATTTACCCTCTTTTGCAGCAGATTTACCCTCGTCT
 
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JMSF052H15-           GCACCAAGAACAAGGGAGCAATAGTCGTCTTCTTCGCATAAACGATTGTTCGTTGTCGAG
                      ____________________________________________________________
consensus             GCACCAAGAACAAGGGAGCAATAGTCGTCTTCTTCGCATAAACGATTGTTCGTTGTCGAG
 
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JMSF052H15-           ATAAACATCATGAAGAGGAAGCCCAAGGCTGCAAAAGAAGCTTCAGCAGACAAGGCCATG
                      ____________________________________________________________
consensus             ATAAACATCATGAAGAGGAAGCCCAAGGCTGCAAAAGAAGCTTCAGCAGACAAGGCCATG
 
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JMSF052H15-           GAAAACAACCAAATAACGGTTTCAAAGCCCTCGAGCCCGGTGTCAAAGAAGACAGCATCC
rJMSF052H15+                           GGTTTCAAAGCCCTCGAGCCCGGTGTCAAAGAAGACAGCATCC
                      ____________________________________________________________
consensus             GAAAACAACCAAATAACGGTTTCAAAGCCCTCGAGCCCGGTGTCAAAGAAGACAGCATCC
 
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JMSF052H15-           AAGTACATTGGTTCTGATGTTAGACGATCTGGTCGGCTTCAAAAGATAGTCTCACCTGCT
rJMSF052H15+          AAGTACATTGGTTCTGATGTTAGACGATCTGGTCGGCTTCAAAAGATAGTCTCACCTGCT
                      ____________________________________________________________
consensus             AAGTACATTGGTTCTGATGTTAGACGATCTGGTCGGCTTCAAAAGATAGTCTCACCTGCT
 
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JMSF052H15-           GGGAACAAGCGTGTTGCTAAGGAAGTTGATCTTACTGATAACAAAATGGAAGAGGGGCGG
rJMSF052H15+          GGGAACAAGCGTGTTGCTAAGGAAGTTGATCTTACTGATAACAAAATGGAAGAGGGGCGG
                      ____________________________________________________________
consensus             GGGAACAAGCGTGTTGCTAAGGAAGTTGATCTTACTGATAACAAAATGGAAGAGGGGCGG
 
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JMSF052H15-           GACCCTCACGCTGAGGAGCGGGGAGGGACCACTGAGCTCGCGCTGGAGACTGATCATGGT
rJMSF052H15+          GACCCTCACGCTGAGGAGCGGGGAGGGACCACTGAGCTCGCGCTGGAGACTGATCATGGT
                      ____________________________________________________________
consensus             GACCCTCACGCTGAGGAGCGGGGAGGGACCACTGAGCTCGCGCTGGAGACTGATCATGGT
 
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JMSF052H15-           GATGGAAAACCCGAGGAGGTGCAGATTGTTGAGCCATTTATCGCCAATCCAACTGAGGAA
rJMSF052H15+          GATGGAAAACCCGAGGAGGTGCAGATTGTTGAGCCATTTATCGCCAATCCAACTGAGGAA
                      ____________________________________________________________
consensus             GATGGAAAACCCGAGGAGGTGCAGATTGTTGAGCCATTTATCGCCAATCCAACTGAGGAA
 
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JMSF052H15-           CAGATAGCCATGGAAGAGAAAATCGACTACCTGTATCAGACAGCAAAAGACCTAAAAGCT
rJMSF052H15+          CAGATAGCCATGGAAGAGAAAATCGACTACCTGTATCAGACAGCAAAAGACCTAAAAGCT
                      ____________________________________________________________
consensus             CAGATAGCCATGGAAGAGAAAATCGACTACCTGTATCAGACAGCAAAAGACCTAAAAGCT
 
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JMSF052H15-           AAGGCTGCCAAAAAGTCGGTACCAAGTGGAACAACTACATGTGAAGACCTGAAATACAAG
rJMSF052H15+          AAGGCTGCCAAAAAGTCGGTACCAAGTGGAACAACTACATGTGAAGACCTGAAATACAAG
                      ____________________________________________________________
consensus             AAGGCTGCCAAAAAGTCGGTACCAAGTGGAACAACTACATGTGAAGACCTGAAATACAAG
 
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JMSF052H15-           GACTTGTATATTGACTCGGAGAAAAAGGTTGAAGAATTAACCCACGTAAACTTTCAGCTA
rJMSF052H15+          GACTTGTATATTGACTCGGAGAAAAAGGTTGAAGAATTAACCCACGTAAACTTTCAGCTA
                      ____________________________________________________________
consensus             GACTTGTATATTGACTCGGAGAAAAAGGTTGAAGAATTAACCCACGTAAACTTTCAGCTA
 
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JMSF052H15-           GCCNAGGATTTGGAGTTTGCCCGTGGCAAAATCGAAGCTTATGAGAGATTTATTGATGCT
rJMSF052H15+          GCCAAGGATTTGGAGTTTGCCCGTGGCAAAATCGAAGCTTATGAGAGATTTATTGATGCT
                      ____________________________________________________________
consensus             GCCAAGGATTTGGAGTTTGCCCGTGGCAAAATCGAAGCTTATGAGAGATTTATTGATGCT
 
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JMSF052H15-           TCCACG                                                      
rJMSF052H15+          TCCACGGGGAAGGTAAAGGAAATGATTGTTTTGACAAATTTTGAGAGAGTTGCTGAAACT
                      ____________________________________________________________
consensus             TCCACGGGGAAGGTAAAGGAAATGATTGTTTTGACAAATTTTGAGAGAGTTGCTGAAACT
 
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rJMSF052H15+          GTCCTAAACCTATCTGAAGACGAACTAAAGAAAAGTTATGCAAACAAGAAAAGCGGTGCA
                      ____________________________________________________________
consensus             GTCCTAAACCTATCTGAAGACGAACTAAAGAAAAGTTATGCAAACAAGAAAAGCGGTGCA
 
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rJMSF052H15+          GATACTGAGGCTCCTAATCCTTTGCCTCAACCGAAGATCGCCCACACAAACGCTCCGTCT
                      ____________________________________________________________
consensus             GATACTGAGGCTCCTAATCCTTTGCCTCAACCGAAGATCGCCCACACAAACGCTCCGTCT
 
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rJMSF052H15+          GCAGCAAGAAATGCGAAAAGGAAGAAAACCTCTCAATAGCATAAGGAAAACGGAAAAGAC
                      ____________________________________________________________
consensus             GCAGCAAGAAATGCGAAAAGGAAGAAAACCTCTCAATAGCATAAGGAAAACGGAAAAGAC
 
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rJMSF052H15+          CCTTGGTTTTGGTTGTATGTTTAATGATTATTCGGCATTGTAAGCGGGTAGAAGTCTTAA
                      ____________________________________________________________
consensus             CCTTGGTTTTGGTTGTATGTTTAATGATTATTCGGCATTGTAAGCGGGTAGAAGTCTTAA
 
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rJMSF052H15+          CCTGATATGGTTTTGTGGAAATTTTGTTTCCTGGAGAACCAATGATCCTGGTAGGAGGAT
                      ____________________________________________________________
consensus             CCTGATATGGTTTTGTGGAAATTTTGTTTCCTGGAGAACCAATGATCCTGGTAGGAGGAT