Contig 005852:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006D24Sequence556004579 (10)ref|XP_009589936.1|1e-95PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nico759005852 (11)ref|XP_009781056.1|3e-110PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nico
JMFF018C08Sequence573004579 (10)ref|XP_009589936.1|7e-94PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nico770005852 (11)ref|XP_009781056.1|3e-109PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nico
JMFF022E06Sequence185004579 (10)ref|XP_009589936.1|2e-10PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nico730005852 (11)ref|XP_006346729.1|8e-103PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Sola
JMFF031D09Sequence521004579 (10)ref|XP_009589936.1|9e-75PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nico729005852 (11)ref|XP_009781056.1|2e-112PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nico
JMFF034A08Sequence655005852 (11)ref|XP_006346729.1|3e-71PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Sola
JMFF043M16Sequence619004579 (10)ref|XP_009589936.1|2e-111PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nico550005852 (11)ref|XP_004237482.1|3e-38PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A [Solanum l
JMFF050A23Sequence595004579 (10)ref|XP_009589936.1|1e-93PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nico606005852 (11)ref|XP_006346729.1|2e-75PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Sola
JMFF051J14Sequence577004579 (10)ref|XP_009589936.1|1e-97PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nico522005852 (11)ref|XP_004237482.1|1e-37PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A [Solanum l
JMSF034B15Sequence696004579 (10)ref|XP_010261003.1|2e-120PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nelu755005852 (11)ref|XP_009781056.1|3e-113PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nico
JMSF048M07Sequence661004579 (10)ref|XP_010261003.1|2e-116PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nelu767005852 (11)ref|XP_006346729.1|7e-91PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Sola
JMSF052G14Sequence706004579 (10)ref|XP_010261003.1|2e-137PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nelu959005852 (11)ref|XP_009781056.1|1e-132PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nico

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF052G14+ ATATGAGATACCTTCTGTAAAAGAAGACCCAGAAAAATGGATACCGGTGCTAAGGAAAAT
                      ____________________________________________________________
consensus ATATGAGATACCTTCTGTAAAAGAAGACCCAGAAAAATGGATACCGGTGCTAAGGAAAAT
 
. : . : . : . : . : . :
rJMFF022E06+ C
rJMFF006D24+ CCTATGCAATCAAGCCTTCATAACTCTAC
rJMFF018C08+ CCACATGATCNTATGCAATCAAGCCTTCATAACTNTAC
rJMSF034B15+ CCACATGATCCTATGCAATCCAGCCTTCATAACTCTAC
rJMFF031D09+ CCACATGATCCTATGCAATCAAGCCTTCATAACTCTAC
rJMSF052G14+ ATGCTGGTACCTGGTTCTGTCTCCACATGATCCTATGCAATCAAGCCTTCATAACTCTAC
                      ____________________________________________________________
consensus ATGCTGGTACCTGGTTCTGTCTCCACATGATCCTATGCAATCAAGCCTTCATAACTCTAC
 
. : . : . : . : . : . :
rJMFF022E06+ CTTGGAGGATAAGAACCTTTCAGAAATCCCTCATTTCAAGGTGCTATTGAAACAATTAAT
rJMFF006D24+ CTTGGAGGATAAGAACCTTTCAGAAATCCCTCATTTCAAGGTGCTATTGAAACAATTAAT
rJMFF018C08+ CTNGGAGGATAAGAACCTTTCAGAAATCCNTCATTTCAAGGTGCTATTGAAACAATTAAT
rJMSF048M07+ TGAAACAATTNAT
rJMSF034B15+ CTTGGAGGATAAGAACCTTTCAGAAATCCCTCATTTCAAGGTGCTATTGAAACAATTAAT
rJMFF031D09+ CTGGGAGGATAAGAACCTTTCAGAAATCCCTCATTTCAAGGTGCTATTGAAACAATTAAT
rJMSF052G14+ CTTGGAGGATAAGAACCTTTCAGAAATCCCTCATTTCAAGGTGCTATTGAAACAATTAAT
                      ____________________________________________________________
consensus CTTGGAGGATAAGAACCTTTCAGAAATCCCTCATTTCAAGGTGCTATTGAAACAATTAAT
 
. : . : . : . : . : . :
rJMFF022E06+ TACCATGGAGGTTATTCAGTGGACTGCTTTGTGGAACACATTCAAGGATGAGTTTGAGAA
rJMFF050A23+ TCAAGGATGAGTTGNAGAA
rJMFF006D24+ TACCATGGAGGTTATTCAGTGGACTGCTTTGTGGAACACATTCAAGGATGAGTTTGAGAA
rJMFF018C08+ TACCATGGAGGTTATTCAGTGGACTGCTTTGTGGAACACATTCAAGGATGAGTTTGAGAA
rJMSF048M07+ TACCATGGAGGTTATTCAGTGGACTGCTTTGTGGAACACATTCAAGGATGAGTTTGAGAA
rJMSF034B15+ TACCATGGAGGTTATTCAGTGGACTGCTTTGTGGAACACATTCAAGGATGAGTTTGAGAA
rJMFF031D09+ TACCATGGAGGTTATTCAGTGGACTGCTTTGTGGAACACATTCAAGGATGAGTTTGAGAA
rJMFF034A08+ A
rJMSF052G14+ TACCATGGAGGTTATTCAGTGGGCTGCTTTGTGGAACACATTCAAGGATGAGTTTGAGAA
                      ____________________________________________________________
consensus TACCATGGAGGTTATTCAGTGGACTGCTTTGTGGAACACATTCAAGGATGAGTTTGAGAA
 
. : . : . : . : . : . :
rJMFF022E06+ TGAAAAGAATATGCTTGGTGGCTCCTTAGGTGACAAGGCAGCTGAAGATCTTAGACTGAG
rJMFF050A23+ TGAAAAGAATATGCTTGGTGGCTCCTTAGGTGACAAGGCAGCTGAAGATCTTAGACTGAG
rJMFF006D24+ TGAAAAGAATATGCTTGGTGGCTCCTTAGGTGACAAGGCAGCTGAAGATCTTAGACTGAG
rJMFF018C08+ TGAAAAGAATATGCTTGGTGGCTCCTTAGGTGACAAGGCAGCTGAAGATCTTAGACTGAG
rJMSF048M07+ TGAAAAGAATATGCTTGGTGGCTCCTTAGGTGACAAGGCAGCTGAAGATCTTAGACTGAG
rJMSF034B15+ TGAAAAGAATATGCTTGGTGGCTCCTTAGGTGACAAGGCAGCTGAAGATCTTAGACTGAG
rJMFF031D09+ TGAAAAGAATATGCTTGGTGGCTCCTTAGGTGACAAGGCAGCTGAAGATCTTAGACTGAG
rJMFF034A08+ TGAAAAGAATATGCTTGGTGGCTCNTTAGGTGACAAGGCAGCTGAAGATCTTAGACTGAG
rJMSF052G14+ TGAAAAGAATATGCTTGGTGGCTCCTTAGGTGACAAGGCAGCTGAAGATCTTAGACTGAG
                      ____________________________________________________________
consensus TGAAAAGAATATGCTTGGTGGCTCCTTAGGTGACAAGGCAGCTGAAGATCTTAGACTGAG
 
. : . : . : . : . : . :
rJMFF022E06+ AGTTATTGAACATAACATCCTTGTCGTGTCAAAGTATTATTCACGAATAACCTTGAACAG
rJMFF050A23+ AGTTATTGAACATAACATCCTNGTCGTGTCAAAGTATTATTCACGAATAACCTTGAACAG
rJMFF006D24+ AGTTATTGAACATAACATCCTTGTCGTGTCAAAGTATTATTCACGAATAACCTTGAACAG
rJMFF018C08+ AGTTATTGAACATAACATCCTTGTCGTGTCAAAGTATTATTCACGAATAACCTTGAACAG
rJMSF048M07+ AGTTATTGAACATAACATCCTTGTCGTGTCAAAGTATTATTCACGAATAACCTTGAACAG
rJMSF034B15+ AGTTATTGAACATAACATCCTTGTCGTGTCAAAGTATTATTCACGAATAACCTTGAACAG
rJMFF031D09+ AGTTATTGAACATAACATCCTTGTCGTGTCAAAGTATTATTCACGAATAACCTTGAACAG
rJMFF034A08+ AGTTATTGAACATAACATCCTTGTCGTGTCAAAGTATTATTCACGAATAACCTTGAACAG
rJMSF052G14+ AGTTATTGAACATAACATCCTTGTCGTGTCAAAGTATTATTCACGAATAACCTTGAACAG
                      ____________________________________________________________
consensus AGTTATTGAACATAACATCCTTGTCGTGTCAAAGTATTATTCACGAATAACCTTGAACAG
 
. : . : . : . : . : . :
rJMFF022E06+ ACTATCAAATCTGCTCTGTCTTACTATTCAGGAAGCAGAAAAGCATCTATCAGAAATGGT
rJMFF050A23+ ACTATCAAATCTGCTCTGTCTTACTATTCAGGAAGCAGAAAAGCATCTATCAGAAATGGT
rJMFF006D24+ ACTATCAAATCTGCTCTGTCTTACTATTCAGGAAGCAGAAAAGCATCTATCAGAAATGGT
rJMFF018C08+ ACTATCAAATCTGCTCTGTCTTACTATTCAGGAAGCAGAAAAGCATCTATCAGAAATGGT
rJMSF048M07+ ACTATCAAATCTGCTCTGTCTTACTATTCAGGAAGCAGAAAAGCATCTATCAGAAATGGT
rJMSF034B15+ ACTATCAAATCTGCTCTGTCTTACTATTCAGGAAGCAGAAAAGCATCTATCAGAAATGGT
rJMFF031D09+ ACTATCAAATCTGCTCTGTCTTACTATTCAGGAAGCAGAAAAGCATCTATCAGAAATGGT
rJMFF034A08+ ACTATCAAATCTGCTCTGTCTTACTATTCAGGAAGCAGAAAAGCATCTATCAGAAATGGT
rJMFF043M16+ TCAGGAAGCAGAAAAGCATCTATCAGAAATGGT
rJMFF051J14+ GGAAGCAGAAAAGCATCTATCAGAAATGGT
rJMSF052G14+ ACTATCAAATCTGCTCTGTCTTACTATTCAGGAAGCAGAAAAGCATCTATCAGAAATGGT
                      ____________________________________________________________
consensus ACTATCAAATCTGCTCTGTCTTACTATTCAGGAAGCAGAAAAGCATCTATCAGAAATGGT
 
. : . : . : . : . : . :
rJMFF022E06+ TGTATCCAAAGCACTGGTTGCAAAGATTGACAGGCCAATGGGTATTGTCTGCTTCCAACC
rJMFF050A23+ TGTATCCAAAGCACTGGTTGCAAAGATTGACAGGCCAATGGGTATTGTCTGCTTCCAACC
rJMFF006D24+ TGTATCCAAAGCACTGGTTGCAAAGATTGACAGGCCAATGGGTATTGTCTGCTTCCAACC
rJMFF018C08+ TGTATCCAAAGCACTGGTTGCAAAGATTGACAGGCCAATGGGTATTGTCTGCTTCCAACC
rJMSF048M07+ TGTATCCAAAGCACTGGTTGCAAAGATTGACAGGCCAATGGGTATTGTCTGCTTCCAACC
rJMSF034B15+ TGTATCCAAAGCACTGGTTGCAAAGATTGACAGGCCAATGGGTATTGTCTGCTTCCAACC
rJMFF031D09+ TGTATCCAAAGCACTGGTTGCAAAGATTGACAGGCCAATGGGTATTGTCTGCTTCCAACC
rJMFF034A08+ TGTATCCAAAGCACTGGTTGCAAAGATTGACAGGCCAATGGGTATTGTCTGCTTCCAACC
rJMFF043M16+ TGTATCCAAAGCACTGGTTGCAAAGATTGACAGGCCAATGGGTATTGTCTGCTTCCAACC
rJMFF051J14+ TGTATCCAAAGCACTGGTTGCAAAGATTGACAGGCCAATGGGTATTGTCTGCTTCCAACC
rJMSF052G14+ TGTATCCAAAGCACTGGTTGCAAAGATTGACAGGCCAATGGGTATTGTCTGCTTCCAACC
                      ____________________________________________________________
consensus TGTATCCAAAGCACTGGTTGCAAAGATTGACAGGCCAATGGGTATTGTCTGCTTCCAACC
 
. : . : . : . : . : . :
rJMFF022E06+ AGCAAAAGACAGTAATGATATTTTAAATTCATGGGCGTCGAACTTGGAGAAACTACTTGA
rJMFF050A23+ AGCAAAAGACAGTAATGATATTTTAAATTCATGGGCGTCGAACTTGGAGAAACTACTTGA
rJMFF006D24+ AGCAAAAGACAGTAATGATATTTTAAATTCATGGGCGTCGAACTTGGAGAAACTACTTGA
rJMFF018C08+ AGCAAAAGACAGTAATGATATTTTAAATTCATGGGCGTCGAACTTGGAGAAACTACTTGA
rJMSF048M07+ AGCAAAAGACAGTAATGATATTTTAAATTCATGGGCGTCGAACTTGGAGAAACTACTTGA
rJMSF034B15+ AGCAAAAGACAGTAATGATATTTTAAATTCATGGGCGTCGAACTTGGAGAAACTACTTGA
rJMFF031D09+ AGCAAAAGACAGTAATGATATTTTAAATTCATGGGCGTCGAACTTGGAGAAACTACTTGA
rJMFF034A08+ AGCAAAAGACAGTAATGATATTTTAAATTCATGGGCGTCGAGCTTGGAGAAACTACTTGA
rJMFF043M16+ AGCAAAAGACAGTAATGATATTTTAAATTCATGGGCGTCGAACTTGGAGAAACTACTTGA
rJMFF051J14+ AGCAAAAGACAGTAATGATATTTTAAATTCATGGGCGTCGAACTTGGAGAAACTACTTGA
rJMSF052G14+ AGCAAAAGACAGTAATGATATTTTAAATTCATGGGCGTCGAACTTGGAGAAACTACTTGA
                      ____________________________________________________________
consensus AGCAAAAGACAGTAATGATATTTTAAATTCATGGGCGTCGAACTTGGAGAAACTACTTGA
 
. : . : . : . : . : . :
rJMFF022E06+ CCTTGTAGAGAAGAGTTGTCACCAGATCCACAAAGAAATGATGGTCCATAAAGCTGCACT
rJMFF050A23+ CCTTGTAGAGAAGAGTTGTCACCAGATCCACAAAGAAATGATGGTCCATAAAGCTGCACT
rJMFF006D24+ CCTTGTAGAGAAGAGTTGTCACCAGATCCACAAAGAAATGATGGTCCATAAAGCTGCACT
rJMFF018C08+ CCTTGTAGAGAAGAGTTGTCACCAGATCCACAAAGAAATGATGGTCCATAAAGCTGCACT
rJMSF048M07+ CCTTGTAGAGAAGAGTTGTCACCAGATCCACAAAGAAATGATGGTCCATAAAGCTGCACT
rJMSF034B15+ CCTTGTAGAGAAGAGTTGTCACCAGATCCACAAAGAAATGATGGTCCATAAAGCTGCACT
rJMFF031D09+ CCTTGTAGAGAAGAGTTGTCACCAGATCCACAAAGAAATGATGGTCCATAAAGCTGCACT
rJMFF034A08+ CCTTGTAGAGAAGAGTTGTCACCAGATCCACAAAGAAATGATGGTCCATAAAGCTGCACT
rJMFF043M16+ CCTTGTAGAGAAGAGTTGTCACCAGATCCACAAAGAAATGATGGTCCATAAAGCTGCACT
rJMFF051J14+ CCTTGTAGAGAAGAGTTGTCACCAGATCCACAAAGAAATGATGGTCCATAAAGCTGCACT
rJMSF052G14+ CCTTGTAGAGAAGAGTTGTCACCAGATCCACAAAGAAATGATGGTCCATAAAGCTGCACT
                      ____________________________________________________________
consensus CCTTGTAGAGAAGAGTTGTCACCAGATCCACAAAGAAATGATGGTCCATAAAGCTGCACT
 
. : . : . : . : . : . :
rJMFF022E06+ AAAAGCTTGAGATAATACCAGTAACTTCAGGACTGCTCTTATGACCCATTTTGAGGAGCA
rJMFF050A23+ AAAAGCTTGAGATAATACCAGTAACTTCAGGACTGCTCTTATGACCCATTTTGAGGAGCA
rJMFF006D24+ AAAAGCTTGAGATAATACCAGTAACTTCAGGACTGCTCTTATGACCCATTTTGAGGAGCA
rJMFF018C08+ AAAAGCTTGAGATAATACCAGTAACTTCAGGACTGCTCTTATGACCCATTTTGAGGAGCA
rJMSF048M07+ AAAAGCTTGAGATAATACCAGTAACTTCAGGACTGCTCTTATGACCCATTTTGAGGAGCA
rJMSF034B15+ AAAAGCTTGAGATAATACCAGTAACTTCAGGACTGCTCTTATGACCCATTTTGAGGAGCA
rJMFF031D09+ AAAAGCTTGAGATAATACCAGTAACTTCAGGACTGCTCTTATGACCCATTTTGAGGAGCA
rJMFF034A08+ AAAAGCTTGAGATAATACCAGTAACTTCAGGACTGCTCTTATGACCCATTTTGAGGAGCA
rJMFF043M16+ AAAAGCTTGAGATAATACCAGTAACTTCAGGACTGTTCTTATGACCCATTTTGAGGAGCA
rJMFF051J14+ AAAAGCTTGAGATAATACCAGTAACTTCAGGACTGCTCTTATGACCCATTTTGAGGAGCA
rJMSF052G14+ AAAAGCTTGAGATAATACCAGTAACTTCAGGACTGCTCTTATGACCCATTTTGAGGAGCA
                      ____________________________________________________________
consensus AAAAGCTTGAGATAATACCAGTAACTTCAGGACTGCTCTTATGACCCATTTTGAGGAGCA
 
. : . : . : . : . : . :
rJMFF022E06+ TTGGCAGAACCTGGAAGCGGACATTACTGCTGTTATATTGCTGCTTGCTTCTTGCATCTT
rJMFF050A23+ TTGGCAGAACCTGGAAGCGGACATTACTGCTGTTATATTGCTGCTTGCTTCTTGCATCTT
rJMFF006D24+ TTGGCAGAACCTGGAAGCGGACATTACTGCTGTTATATTGCTGCTTGCTTCTTGCATCTT
rJMFF018C08+ TTGGCAGAACCTGGAAGCGGACATTACTGCTGTTATATTGCTGCTTGCTTCTTGCATCTT
rJMSF048M07+ TTGGCAGAACCTGGAAGCGGACATTACTGCTGTTATATTGCTGCTTGCTTCTTGCATCTT
rJMSF034B15+ TTGGCAGAACCTGGAAGCGGACATTACTGCTGTTATATTGCTGCTTGCTTCTTGCATCTT
rJMFF031D09+ TTGGCAGAACCTGGAAGCGGACATTACTGCTGTTATATTGCTGCTTGCTTCTTGCATCTT
rJMFF034A08+ TTGGCAGAACCTGGAAGCGGACATTACTGCTGTTATATTGCTGCTTGCTTCTTGCATCTT
rJMFF043M16+ TTGGCAGAACCTGGAAGCGGACATTACTGCTGTTATATTGCTGCTTGCTTCTTGCATCTT
rJMFF051J14+ TTGGCAGAACCTGGAAGCGGACATTACTGCTGTTATATTGCTGCTTGCTTCTTGCATCTT
rJMSF052G14+ TTGGCAGAACCTGGAAGCGGACATTACTGCTGTTATATTGCTGCTTGCTTCTTGCATCTT
                      ____________________________________________________________
consensus TTGGCAGAACCTGGAAGCGGACATTACTGCTGTTATATTGCTGCTTGCTTCTTGCATCTT
 
. : . : . : . : . : . :
rJMFF022E06+ AATACTTGTGACATTTGCACGGTTTCTGCCAAGTGCTTTTTATGTACTTCTTGTATGCCT
rJMFF050A23+ AATACTTGTGACATTTGCACGGTTTCTGCCAAGTGCTTTTTATGTACTTCTTGTATGCCT
rJMFF006D24+ AATACTTGTGACATTTGCACGGTTTCTGCCAAGTGCTTTTTATGTACTTCTTGTATGCCT
rJMFF018C08+ AATACTTGTGACATTTGCACGGTTTCTGCCAAGTGCTTTTTATGTACTTCTTGTATGCCT
rJMSF048M07+ AATACTTGTGACATTTGCACGGTTTCTGCCAAGTGCTTTTTATGTACTTCTTGTATGCCT
rJMSF034B15+ AATACTTGTGACATTTGCACGGTTTCTGCCAAGTGCTTTTTATGTACTTCTTGTATGCCT
rJMFF031D09+ AATACTTGTGACATTTGCACGGTTTCTGCCAAGTGCTTTTTATGTACTTCTTGTATGCCT
rJMFF034A08+ AATACTTGTGACATTTGCACGGTTTCTGCCAAGTGCTTTTTATGTACTTCTTGTATGCCT
rJMFF043M16+ AATACTTGTGACATTTGCACGGTTTCTGCCAAGTGCTTTTTATGTACTTCTTGTATGCCT
rJMFF051J14+ AATACTTGTGACATTTGCACGGTTTCTGCCAAGTGCTTTTTATGTACTTCTTGTATGCCT
rJMSF052G14+ AATACTTGTGACATTTGCACGGTTTCTGCCAAGTGCTTTTTATGTACTTCTTGTATGCCT
                      ____________________________________________________________
consensus AATACTTGTGACATTTGCACGGTTTCTGCCAAGTGCTTTTTATGTACTTCTTGTATGCCT
 
. : . : . : . : . : . :
rJMFF022E06+ TTGGTGATTGAATTGATTGTGATCAA-CAAGATTTTAGATTTGGTGACATCACATACTTG
rJMFF050A23+ TTGGTGATTGAATTGATTGTGATCAA-CAAGATTTTAGATTTGGTGAC
rJMFF006D24+ TTGGTGATTGAATTGATTGTGATCAA-CAAGATTTTAGATTTGGTGACATCACATACTTG
rJMFF018C08+ TTGGTGATTGAATTGATTGTGATCAA-CAAGATTTTAGATTTGGTGACATCACATACTTG
rJMSF048M07+ TTGGTGATTGAATTGATTGTGATCAA-CAAGATTTTAGATTTGGTGACATCACATACTTG
rJMSF034B15+ TTGGTGATTGAATTGATTGTGATCAACCAAGATTTTAGATTTGGTGACATCACATAC
rJMFF031D09+ TTGGTGATTGAATTGATTGTGATCAA-CAAGA
rJMFF034A08+ TTGGTGATTGAATTGATTGTGATCAA-CAAGATTTTAGATTTGGTGACATCACATACTTG
rJMFF043M16+ TTGGTGATTGAATTGATTGTGATCAA-CAAGATTTTAGATTTGGTGACATCACATACTTG
rJMFF051J14+ TTGGTGATTGAATTGATTGTGATCAA-CAAGATTTTAGATTTGGTGACATCACATACTTG
rJMSF052G14+ TTGGTGATTGAATTGATTGTGATCAA-CAAGATTTTAGATTTGGTGACATCACATACTTG
                      ____________________________________________________________
consensus TTGGTGATTGAATTGATTGTGATCAA-CAAGATTTTAGATTTGGTGACATCACATACTTG
 
. : . : . : . : . : . :
rJMFF022E06+ CTTACATGCT
rJMFF006D24+ CTTACATGCTA
rJMFF018C08+ CTTACATGCTA
rJMSF048M07+ CTTACATGCTATTTACTTATTGATTAGGGCACAAACTCTCTTAGTTTATTTCAAAATGTG
rJMFF034A08+ CTTACATGCTATTTACTTATTGATTAGGGCACAAACTCTCTTAGTTTATT
rJMFF043M16+ CTTACATGCTATTTACTTATTGATTAGGGCACAAACTCTCTTAGTTTATTTCAAAATGTG
rJMFF051J14+ CTTACATGCTATTTACTTATTGATTAGGGCACAAA
rJMSF052G14+ CTTACATGCTATTTACTTATTGATTAGGGCACAAACTCTCTTAGTTTATTTCAAAATGTG
                      ____________________________________________________________
consensus CTTACATGCTATTTACTTATTGATTAGGGCACAAACTCTCTTAGTTTATTTCAAAATGTG
 
. : . : . : . : . : . :
rJMSF048M07+ ACACTTTTAATTGCTT
rJMFF043M16+ ACACTTTTAATTGCTT
rJMSF052G14+ ACACTTTTAATTGCTTTTTGATTCCATTCCTCGGTCAATTGTGGATATATTGCATAAAAG
                      ____________________________________________________________
consensus ACACTTTTAATTGCTTTTTGATTCCATTCCTCGGTCAATTGTGGATATATTGCATAAAAG