Contig 005851:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003E18Sequence432008108 (4)ref|XP_006363350.1|6e-27PREDICTED: E3 UFM1-protein ligase 1 homolog [Solanum tuberosum]394005851 (2)ref|XP_009598257.1|2e-43PREDICTED: E3 UFM1-protein ligase 1 homolog [Nicotiana tomentosiformis]
JMSF052F17Sequence692008108 (4)ref|XP_009598257.1|6e-73PREDICTED: E3 UFM1-protein ligase 1 homolog [Nicotiana tomentosiformis]848005851 (2)ref|XP_009598257.1|6e-121PREDICTED: E3 UFM1-protein ligase 1 homolog [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF052F17+ TGAGTCATTTT
                      ____________________________________________________________
consensus TGAGTCATTTT
 
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rJMSF052F17+ TGAATATGCAGCTTTACGAAAAAGCATTGGATCTGTTTGAAGACGACCAATCAACCTCAA
                      ____________________________________________________________
consensus TGAATATGCAGCTTTACGAAAAAGCATTGGATCTGTTTGAAGACGACCAATCAACCTCAA
 
. : . : . : . : . : . :
rJMSF052F17+ TTCTTCTCCACAAACATTTGTTGCGAACTACAGGAACCTTTATGGTGGATACTTTGCTTC
                      ____________________________________________________________
consensus TTCTTCTCCACAAACATTTGTTGCGAACTACAGGAACCTTTATGGTGGATACTTTGCTTC
 
. : . : . : . : . : . :
rJMSF052F17+ TTAACCTGGATGTGCACAATAAATTGAAAAATGGAATTGAAGTTGATGAGTCTCAAAATC
                      ____________________________________________________________
consensus TTAACCTGGATGTGCACAATAAATTGAAAAATGGAATTGAAGTTGATGAGTCTCAAAATC
 
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rJMSF052F17+ GTGAACCTGCTTCACTTAACTCTGGGGATAGAAATGCTCTTGCCAAGAGTCTCCCAGGAC
                      ____________________________________________________________
consensus GTGAACCTGCTTCACTTAACTCTGGGGATAGAAATGCTCTTGCCAAGAGTCTCCCAGGAC
 
. : . : . : . : . : . :
rJMSF052F17+ CACTGTCTGTCAAGGCAACTGCCCTACTTGAAGCTTTGGAAGGGAAGCGGGTGGAAATGT
                      ____________________________________________________________
consensus CACTGTCTGTCAAGGCAACTGCCCTACTTGAAGCTTTGGAAGGGAAGCGGGTGGAAATGT
 
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rJMSF052F17+ TCATGACTGCACTAAGAGCTCTGGCAGAGGAAAGCGGATTAATTCTGAAGAAGCTGGATA
                      ____________________________________________________________
consensus TCATGACTGCACTAAGAGCTCTGGCAGAGGAAAGCGGATTAATTCTGAAGAAGCTGGATA
 
. : . : . : . : . : . :
rJMSF052F17+ AGAAATTGGAGAGGACCCTTCTGCATTCATATCGCAAGGATCTGACAACTCAAGTTTCTG
                      ____________________________________________________________
consensus AGAAATTGGAGAGGACCCTTCTGCATTCATATCGCAAGGATCTGACAACTCAAGTTTCTG
 
. : . : . : . : . : . :
rJMSF003E18+ TGATGCAGTTTCGCTTTTACCAAAAGTNGTTTNTATACTTTATGTACAGGTTC
rJMSF052F17+ CTGAAACTGATGCAGTTTCACTTTTACCAAAAGTTGTTTCTCTACTTTATGTACAGGTTC
                      ____________________________________________________________
consensus CTGAAACTGATGCAGTTTCGCTTTTACCAAAAGTTGTTTCTCTACTTTATGTACAGGTTC
 
. : . : . : . : . : . :
rJMSF003E18+ ATGGAAAAGCACTTCAGGCTCCTGGCAGGGCCATTTCTGNTGCTGTCTCTGGGTTAAAGG
rJMSF052F17+ ATGGAAAAGCACTTCAGGCTCCTGGCAGGGCCATTTCTGCTGCTGTCTCTGGTTTAAAGG
                      ____________________________________________________________
consensus ATGGAAAAGCACTTCAGGCTCCTGGCAGGGCCATTTCTGCTGCTGTCTCTGGTTTAAAGG
 
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rJMSF003E18+ ATAAGCTGGATGATTCCGCATTCAAGACCCNGACAGATTNCCAGAGCACAACAGTGAGCC
rJMSF052F17+ ATAAGCTGGATGATTCCGCATTCAAGACCCTGACAGATTACCAGAGCACAACAGTGAGCC
                      ____________________________________________________________
consensus ATAAGCTGGATGATTCCGCATTCAAGACCCTGACAGATTACCAGAGCACAACAGTGAGCC
 
. : . : . : . : . : . :
rJMSF003E18+ TTTTGTCACTAATGTCTGCTGCAACTGGNGATGAAGAAGATTGCTCGTCGGATAGAATCC
rJMSF052F17+ TTTCGTCACTAATGTCTGCTGCAACTGGTGATGAAGAAGATTGCTCGTCGGATAGAATCC
                      ____________________________________________________________
consensus TTTTGTCACTAATGTCTGCTGCAACTGGTGATGAAGAAGATTGCTCGTCGGATAGAATCC
 
. : . : . : . : . : . :
rJMSF003E18+ AAACCAAAAGGGAGGTTCTGGAGGGTNTGATGCCTGCATTGAAAGGCTTAGTGTTGAGTA
rJMSF052F17+ AAACCAAAAGGGAGGTTCTGGAGGGTTTGATGCCTGCATTGAAAGGCTTAGTGTTGAGTA
                      ____________________________________________________________
consensus AAACCAAAAGGGAGGTTCTGGAGGGTTTGATGCCTGCATTGAAAGGCTTAGTGTTGAGTA
 
. : . : . : . : . : . :
rJMSF003E18+ GTCAACAGTCTATGACTGTGTTGTNGAAATNGTTNTACTAACTCCAGTTTGAAGCAAAAG
rJMSF052F17+ GTCAACAGTC--TTGATGTGTTGTAGAAATAGTTTTACTAACTCCAGTTTGAAGCAAAAG
                      ____________________________________________________________
consensus GTCAACAGTCTATTGCTGTGTTGTAGAAATAGTTTTACTAACTCCAGTTTGAAGCAAAAG
 
. : . : . : . : . : . :
rJMSF003E18+ GAATCNTGTGTTTCCTTCTGCGGAAAATGTGACAACCCGAT
rJMSF052F17+ GAA-CTTGTGTTTCCTTCTGCGGAAAATGTGACAACCCGATAGATTTCTTGTTCACAAAT
                      ____________________________________________________________
consensus GAATCTTGTGTTTCCTTCTGCGGAAAATGTGACAACCCGATAGATTTCTTGTTCACAAAT