Contig 005849:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF051P17-                              GGCTGCATTTTGTAAAGATGGAGATTGAAGTCAAGCTCCGA
                      ____________________________________________________________
consensus                                GGCTGCATTTTGTAAAGATGGAGATTGAAGTCAAGCTCCGA
 
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JMSF051P17-           TTGCCTGATGCCGATTCGCACCGAAAGCTCCTCTCGCTTCTCACTCCGTTTCACATCCAA
                      ____________________________________________________________
consensus             TTGCCTGATGCCGATTCGCACCGAAAGCTCCTCTCGCTTCTCACTCCGTTTCACATCCAA
 
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JMSF051P17-           ACCCACCACCAACGCAACACCTTCTTCGACGGCGCGGCGGCGGAGCTCAGCTCTCAGCGT
                      ____________________________________________________________
consensus             ACCCACCACCAACGCAACACCTTCTTCGACGGCGCGGCGGCGGAGCTCAGCTCTCAGCGT
 
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JMSF051P17-           GCCGTTCTCCGCCTCCGGTTCTACGAGAACTCGGAATCCCCCAAGTGTGTCGTCTCCCTC
rJMSF051P17+                           GTTCTACGAGAACTCGGAATCCCCCAAGTGTGTCGTCTCCCTC
                      ____________________________________________________________
consensus             GCCGTTCTCCGCCTCCGGTTCTACGAGAACTCGGAATCCCCCAAGTGTGTCGTCTCCCTC
 
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JMSF051P17-           AAGGCAAAAGCGGTACTAGTCAACGGCGTGAGTAGAGTCGAGGAGGATGAGGAGGAACTG
rJMSF051P17+          AAGGCAAAAGCGGTACTAGTCAACGGCGTGAGTAGAGTCGAGGAGGATGAGGAGGAACTG
                      ____________________________________________________________
consensus             AAGGCAAAAGCGGTACTAGTCAACGGCGTGAGTAGAGTCGAGGAGGATGAGGAGGAACTG
 
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JMSF051P17-           GACCCCAAAATCGGGTACGAGTGCGTTGAGAATCCGGCGAAGTTAATTGAGGTGGATTCG
rJMSF051P17+          GACCCCAAAATCGGGTACGAGTGCGTTGAGAATCCGGCGAAGTTAATTGAGGTGGATTCG
                      ____________________________________________________________
consensus             GACCCCAAAATCGGGTACGAGTGCGTTGAGAATCCGGCGAAGTTAATTGAGGTGGATTCG
 
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JMSF051P17-           AGAATTTTGAGGAGAGCAAAGCAGGAATTCCAACTCGGGGAAGCGGGATTTGTGGGGTTA
rJMSF051P17+          AGAATTTTGAGGAGAGCAAAGCAGGAATTCCAACTCGGGGAAGCGGGATTTGTGGGGTTA
                      ____________________________________________________________
consensus             AGAATTTTGAGGAGAGCAAAGCAGGAATTCCAACTCGGGGAAGCGGGATTTGTGGGGTTA
 
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JMSF051P17-           GGAGGGTTTAGGAATGTGAGGAATGTGTATGAGTGGAAAGGTGTGAAGTTAGAAGTANAT
rJMSF051P17+          GGAGGGTTTAGGAATGTGAGGAATGTGTATGAGTGGAAAGGTGTGAAGTTAGAAGTAGAT
                      ____________________________________________________________
consensus             GGAGGGTTTAGGAATGTGAGGAATGTGTATGAGTGGAAAGGTGTGAAGTTAGAAGTAGAT
 
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JMSF051P17-           GAAACAATGTACGATTTCGGCACTCTATATGAGATTGAATGTGAGAGCACGGAACCAGAT
rJMSF051P17+          GAAACAATGTACGATTTCGGCACTCTATATGAGATTGAATGTGAGAGCACGGAACCAGAT
                      ____________________________________________________________
consensus             GAAACAATGTACGATTTCGGCACTCTATATGAGATTGAATGTGAGAGCACGGAACCAGAT
 
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JMSF051P17-           AAAGTAAAGGGGATGATTGAGGAATTCTTGAANGANAATGGGGTTGAGTATTCTTATTCT
rJMSF051P17+          AAAGTAAAGGGGATGATTGAGGAATTCTTGAAGGAGAATGGGGTTGAGTATTCTTATTCT
                      ____________________________________________________________
consensus             AAAGTAAAGGGGATGATTGAGGAATTCTTGAAGGAGAATGGGGTTGAGTATTCTTATTCT
 
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JMSF051P17-           GANAANTCCAAGTTTGCAACTTTCANGGCANGGAANTTGCCTTANTATGTATAATTATGC
rJMSF051P17+          GAGAAGTCCAAGTTTGCAACTTTCAGGGCAGGGAAGTTGCCTTAGTATGTATAATTATGC
                      ____________________________________________________________
consensus             GAGAAGTCCAAGTTTGCAACTTTCAGGGCAGGGAAGTTGCCTTAGTATGTATAATTATGC
 
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JMSF051P17-           GGTTGA                                                      
rJMSF051P17+          GGTTGAGTAATGCTCACTAGTGAGGAACAATCAAAGACATGGCAACAAATAAAGGAAGCT
                      ____________________________________________________________
consensus             GGTTGAGTAATGCTCACTAGTGAGGAACAATCAAAGACATGGCAACAAATAAAGGAAGCT
 
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rJMSF051P17+          ATTTTCCCCTACATTGGTACTTGGCTATTTCATCTTCTTGATGTGTTTTATATTATCGTA
                      ____________________________________________________________
consensus             ATTTTCCCCTACATTGGTACTTGGCTATTTCATCTTCTTGATGTGTTTTATATTATCGTA
 
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rJMSF051P17+          TGACAATTTTAAGAAAAATGCTGTTTAGTTGTTCCTCTGGGAGTATCAATTGCTCTAGAA
                      ____________________________________________________________
consensus             TGACAATTTTAAGAAAAATGCTGTTTAGTTGTTCCTCTGGGAGTATCAATTGCTCTAGAA
 
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rJMSF051P17+          TCGATATGTTCTCACTTCTCAATATGCATAAACACTAAAAATTGGTACAAATGAAAATGC
                      ____________________________________________________________
consensus             TCGATATGTTCTCACTTCTCAATATGCATAAACACTAAAAATTGGTACAAATGAAAATGC