Contig 005848:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP016D12Sequence375005848 (4)ref|XP_009599125.1|6e-28PREDICTED: UTP--glucose-1-phosphate uridylyltransferase-like [Nicotiana tomento
JMSF030P09Sequence666010941 (3)ref|XP_009785113.1|3e-110PREDICTED: UTP--glucose-1-phosphate uridylyltransferase-like [Nicotiana sylvest688005848 (4)ref|XP_009599125.1|1e-35PREDICTED: UTP--glucose-1-phosphate uridylyltransferase-like [Nicotiana tomento
JMSF038O11Sequence385010941 (3)ref|XP_009599125.1|1e-58PREDICTED: UTP--glucose-1-phosphate uridylyltransferase-like [Nicotiana tomento781005848 (4)ref|XP_009599125.1|2e-50PREDICTED: UTP--glucose-1-phosphate uridylyltransferase-like [Nicotiana tomento
JMSF051N07Sequence688010941 (3)ref|XP_009599125.1|3e-101PREDICTED: UTP--glucose-1-phosphate uridylyltransferase-like [Nicotiana tomento719005848 (4)ref|XP_009599125.1|2e-35PREDICTED: UTP--glucose-1-phosphate uridylyltransferase-like [Nicotiana tomento

Alignment

This contig is upended


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rJMSF038O11+                                                GGATGTAATTATCAATAATATT
                      ____________________________________________________________
consensus                                                   GGATGTAATTATCAATAATATT
 
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rJMSF038O11+          GAGTCTCTCAATTCAAAATATGGCTGCAATATCCCTTTGCTTCTGATGAGCNCAGTAAAC
                      ____________________________________________________________
consensus             GAGTCTCTCAATTCAAAATATGGCTGCAATATCCCTTTGCTTCTGATGAGCNCAGTAAAC
 
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rJMCP016D12-                                              TCTAATAAAAACAagaACTCCTTG
rJMSF038O11+          ACCGAAAAGGGTATCCAGAAGGTCTTGGCAAAACATTCTAATAAAAACATNTACTCCNTG
                      ____________________________________________________________
consensus             ACCGAAAAGGGTATCCAGAAGGTCTTGGCAAAACATTCTAATAAAAACATCTACTCCTTG
 
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rJMCP016D12-          CTTCtcgtagtacttttttgatcaccattaGATGTcgtagtagtcaCTCAAAAACgttca
rJMSF038O11+          CTTCAGCATCATGAAGAAACTAGTGGTAATGATGTGCATCAGCAGTCTCAAAAACCAAGT
rJMSF030P09+           TTCAGCATCATGAAGAAACTAGTGGTAATGATGTGCATCAGCAGTCTCAAAAACCAAGT
rJMSF051N07+           TTCAGCATCATGAAGAAACTAGTGGTAATGATGTGCATCAGCAGTCTCAAAAACCAAGT
                      ____________________________________________________________
consensus             CTTCAGCATCATGAAGAAACTAGTGGTAATGATGTGCATCAGCAGTCTCAAAAACCAAGT
 
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rJMCP016D12-          gCgttcctaGAATTATtTCgaaCCAATgacttactccTTTTgtaTTggaTGAtcttctGa
rJMSF038O11+          CCCAAGGATGAANTATATCCTTCCAATCNGAATGAGGTTTTCATTTCCTTGAAGAAGAGT
rJMSF030P09+          CCCAAGGATGAATTATATCCTTCCAATCTGAATGAGGTTTTCATTTCCTTGAAGAAGAGT
rJMSF051N07+          CCCAAGGATGAATTATATCCTTCCAATCTGAATGAGGTTTTCATTTCCTTGAAGAAGAGT
                      ____________________________________________________________
consensus             CCCAAGGATGAATTATATCCTTCCAATCTGAATGAGGTTTTCATTTCCTTGAAGAAGAGT
 
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rJMCP016D12-          TGGAAACTTGATGTGCataTcaCgCtccGTtAtctcatataggaagaGGTGCtcggtctg
rJMSF038O11+          TGGAAACTTGATGTGCTATTGTCCCAGGGTAAAGAGTATATCCTTCTGGTGCAGCCAGAC
rJMSF030P09+          TGGAAACTTGATGTGCTATTGTCCCAGGGTAAAGAGTATATCCTTCTGGTGCAGCCAGAC
rJMSF051N07+          TGGAAACTTGATGTGCTATTGTCCCAGGGTAAAGAGTATATCCTTCTGGTGCAGCCAGAC
                      ____________________________________________________________
consensus             TGGAAACTTGATGTGCTATTGTCCCAGGGTAAAGAGTATATCCTTCTGGTGCAGCCAGAC
 
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rJMCP016D12-          atggTTGCactTTTGGTTGATCgttAAATCCattcagtaCactTatctttgttTAaggtt
rJMSF038O11+          AACCTTGNTGATTTGGTTGATCCAAAAATCCTAAGTCATCTGATTAGAAACAATATCCAA
rJMSF030P09+          AACCTTGCTGATTTGGTTGATCCAAAAATCCTAAGTCATCTGATTAGAAACAATATCCAA
rJMSF051N07+          AACCTTGCTGATTTGGTTGATCCAAAAATCCTAAGTCATCTGATTAGAAACAATATCCAA
                      ____________________________________________________________
consensus             AACCTTGCTGATTTGGTTGATCCAAAAATCCTAAGTCATCTGATTAGAAACAATATCCAA
 
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rJMCP016D12-          TACTGgcaactccTGTTGCCTAgttCTTTgccTGCcctAAATtcgctgaTTcgTgcaGAA
rJMSF038O11+          TACTGCGTTGAGGTGTTGCCTACAACNTTCGGTGCGGAAAATAGCGACNTTGCTCGTGAA
rJMSF030P09+          TACTGCGTTGAGGTGTTGCCTACAACTTTCGGTGCGGAAAATAGCGACTTTGCTCGTGAA
rJMSF051N07+          TACTGCGTTGAGGTGTTGCCTACAACTTTCGGTGCGGAAAATAGCGACTTTGCTCGTGAA
                      ____________________________________________________________
consensus             TACTGCGTTGAGGTGTTGCCTACAACTTTCGGTGCGGAAAATAGCGACTTTGCTCGTGAA
 
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rJMCP016D12-          CAAAtccTTCtccTGGAGcATTTGAAcagatCTttctttCTGTGGATGAAT         
rJMSF038O11+          CAAAAGGTTCAGGNGGAGGATTNGAAGTCTACTAAGAAACTGTGGANGAATATGAATCNC
rJMSF030P09+          CAAAAGGTTCAGGTGGAGGATTTGAAGTCTACTAAGAAACTGTGGATGAATATGAATCTC
rJMSF051N07+          CAAAAGGTTCAGGTGGAGGATTTGAAGTCTACTAAGAAACTGTGGATGAATATGAATCTC
                      ____________________________________________________________
consensus             CAAAAGGTTCAGGTGGAGGATTTGAAGTCTACTAAGAAACTGTGGATGAATATGAATCTC
 
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rJMSF038O11+          ATTGAATCACTAGCAAGAAGAACTTCGNTGAATTTCTCGATATCAGAGTTTCTAAATCGG
rJMSF030P09+          ATTGAATCACTAGCAAGAAGAACTTCGCTGAATTTCTCGATATCAGAGTTTCTAAATCGG
rJMSF051N07+          ATTGAATCACTAGCAAGAAGAACTTCGCTGAATTTCTCGATATCAGAGTTTCTAAATCGG
                      ____________________________________________________________
consensus             ATTGAATCACTAGCAAGAAGAACTTCGCTGAATTTCTCGATATCAGAGTTTCTAAATCGG
 
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rJMSF038O11+          CCCTTCGCNGTTGCTGTTCCAAAACCAGAAGTTGACTGCGTTTGAGAAGAGTACCNCGGA
rJMSF030P09+          CCCTTCGCTGTTGCTGTTCCAAAACCAGAAGTTGACTGCGTTTGAGAAGAGTACCNCGGA
rJMSF051N07+          CCCTTCGCTGTTGCTGTTCCAAAACCAGAAGTTGACTGCGTTTGAGAAGAGTACCNCGGA
                      ____________________________________________________________
consensus             CCCTTCGCTGTTGCTGTTCCAAAACCAGAAGTTGACTGCGTTTGAGAAGAGTACCNCGGA
 
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rJMSF038O11+          GTACTTTTTTTTTTACCCCGGCGTAGATTAGCTGCTGGATTATTATTATTATTATTATTA
rJMSF030P09+          GTACTTTTTTTTTTACCCCGGCGTAGATTAGCTGCTGGATTATTATTATTATTATTATTA
rJMSF051N07+          GTACTTTTTTTTTTACCCCGGCGTAGATTAGCTGCTGGATTATTATTATTATTATTATTA
                      ____________________________________________________________
consensus             GTACTTTTTTTTTTACCCCGGCGTAGATTAGCTGCTGGATTATTATTATTATTATTATTA
 
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rJMSF038O11+          TTATTGAAGAATTTGTATAATGTGTGACGCGCGNTGCATAATTGATTATGCACCGTGGTA
rJMSF030P09+          TTATTGAAGAATTTGTATAATGTGTGACGCGCGGTGCATAATTGATTATGCACCGTGGTA
rJMSF051N07+          TTATTGAAGAATTTGTATAATGTGTGACGCGCGGTGCATAATTGATTATGCACCGTGGTA
                      ____________________________________________________________
consensus             TTATTGAAGAATTTGTATAATGTGTGACGCGCGGTGCATAATTGATTATGCACCGTGGTA
 
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rJMSF038O11+          TTACNCAATCTCGTAGGCGGTCGCAATCACTANTCGACG                     
rJMSF030P09+          TTACTCAATCTCGTAGGCGGTCGCAATCACTATTCGACGATGTATCTATGCCTTATGAGT
rJMSF051N07+          TTACTCAATCTCGTAGGCGGTCGCAATCACTATTCGACGATGTATCTATGCCTTATGAGT
                      ____________________________________________________________
consensus             TTACTCAATCTCGTAGGCGGTCGCAATCACTATTCGACGATGTATCTATGCCTTATGAGT
 
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rJMSF030P09+          TATGACCCTAGTTCCTATTGGTAGT                                   
rJMSF051N07+          TATGACCCTAGTTCCTATTGGTAGTTGAACCTTGTAACCTTATAGATAATATGACACATT
                      ____________________________________________________________
consensus             TATGACCCTAGTTCCTATTGGTAGTTGAACCTTGTAACCTTATAGATAATATGACACATT